RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MYO3BQ8WXR4 1341 aa14.95□□□□□ -0.02
CSNK1E-212ENST00000494610 NBPF12Q5TAG4 269 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-212ENST00000494610 IFNL1Q8IU54 200 aa14.95□□□□□ -0.02
CSNK1E-212ENST00000494610 APOBEC3FQ8IUX4 373 aaKnown RBP14.95□□□□□ -0.02
CSNK1E-212ENST00000494610 SLC10A4Q96EP9 437 aa14.95□□□□□ -0.02
CSNK1E-212ENST00000494610 CD209Q9NNX6 404 aa14.95□□□□□ -0.02
CSNK1E-212ENST00000494610 KIAA0100Q14667 2235 aaKnown RBP14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 NEXNQ0ZGT2 675 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 GCKRQ14397 625 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 DLGAP5Q15398 846 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 OTOP1Q7RTM1 612 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 CDAN1Q8IWY9 1227 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 CD99L2Q8TCZ2 262 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 WNK4Q96J92 1243 aa14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 PRMT6Q96LA8 375 aaPredicted RBP14.94□□□□□ -0.02
CSNK1E-212ENST00000494610 ZNF521Q96K83 1311 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 CSF1RP07333 972 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 KCNJ4P48050 445 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 NOM1Q5C9Z4 860 aaKnown RBP14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 MPHOSPH8Q99549 860 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 PTPN18Q99952 460 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 CFHR5Q9BXR6 569 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 VEZTQ9HBM0 779 aa14.93□□□□□ -0.02
CSNK1E-212ENST00000494610 IL16Q14005 1332 aa14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 TWISTNBQ3B726 338 aaPredicted RBP14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 CFAP100Q494V2 611 aa14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 WWC1Q8IX03 1113 aa14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 ZNF594Q96JF6 807 aaPredicted RBP14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 ANKRD2Q9GZV1 360 aa14.92□□□□□ -0.02
CSNK1E-212ENST00000494610 E9PSI1 815 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 PLIN1O60240 522 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 EN2P19622 333 aaPredicted RBP14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 FOXO4P98177 505 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 CRHR2Q13324 411 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 EPHA10Q5JZY3 1008 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 PLA2G12BQ9BX93 195 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 STK31Q9BXU1 1019 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 SALL2Q9Y467 1007 aaPredicted RBP14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 ECM29Q5VYK3 1845 aa14.91□□□□□ -0.02
CSNK1E-212ENST00000494610 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 MANSC4A6NHS7 340 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 FLIIQ13045 1269 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 MAP3K11Q16584 847 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 ELP3Q9H9T3 547 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 CHMP3Q9Y3E7 222 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 OTOFQ9HC10 1997 aa14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 RANBP2P49792 3224 aaKnown RBP14.9□□□□□ -0.02
CSNK1E-212ENST00000494610 CEP290O15078 2479 aa14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 F6X3S4 739 aa14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 MYCP01106 439 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 RBM5P52756 815 aaKnown RBP eCLIP14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 RASA3Q14644 834 aa14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 HABP4Q5JVS0 413 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 PTPN22Q9Y2R2 807 aa14.89□□□□□ -0.03
CSNK1E-212ENST00000494610 ZSWIM8A7E2V4 1837 aa14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 ANKRD18BA2A2Z9 1011 aa14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 PPP1R12BO60237 982 aaPredicted RBP14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 ECM2O94769 699 aaPredicted RBP14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 ALDH1A1P00352 501 aa14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 GRIK5Q16478 980 aa14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 MTMR14Q8NCE2 650 aa14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 DNAAF4Q8WXU2 420 aa14.88□□□□□ -0.03
CSNK1E-212ENST00000494610 ZBTB48P10074 688 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-212ENST00000494610 IL1R1P14778 569 aa14.87□□□□□ -0.03
CSNK1E-212ENST00000494610 TDRD3Q9H7E2 651 aaKnown RBP14.87□□□□□ -0.03
CSNK1E-212ENST00000494610 LAMB1P07942 1786 aa14.87□□□□□ -0.03
CSNK1E-212ENST00000494610 COL1A1P02452 1464 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-212ENST00000494610 GYG1P46976 350 aa14.86□□□□□ -0.03
CSNK1E-212ENST00000494610 INHBEP58166 350 aa14.86□□□□□ -0.03
CSNK1E-212ENST00000494610 LMBR1LQ6UX01 489 aa14.86□□□□□ -0.03
CSNK1E-212ENST00000494610 LINS1Q8NG48 757 aa14.86□□□□□ -0.03
CSNK1E-212ENST00000494610 OPTNQ96CV9 577 aa14.86□□□□□ -0.03
CSNK1E-212ENST00000494610 TCP10L2B9ZVM9 353 aa14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 IFIT5Q13325 482 aaKnown RBP14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 SUPT20HL1Q3ZLR7 823 aa14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 C15orf52Q6ZUT6 534 aaKnown RBP14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 ZNF804AQ7Z570 1209 aa14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 BRI3BPQ8WY22 251 aa14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 MS4A4AQ96JQ5 239 aa14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 PUS3Q9BZE2 481 aaKnown RBP14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 TMEM39BQ9GZU3 492 aa14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 EFCC1Q9HA90 598 aa14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 ZNF70Q9UC06 446 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 IQSEC3Q9UPP2 1182 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-212ENST00000494610 MYO1BO43795 1136 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 IREB2P48200 963 aaKnown RBP14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 MMP14P50281 582 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 CACNB3P54284 484 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 SP3Q02447 781 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 SLFN5Q08AF3 891 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 BEND3Q5T5X7 828 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms