RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
ERCC3-209ENST00000494464 FAM205AQ6ZU69 1335 aa16.47■□□□□ 0.23
ERCC3-209ENST00000494464 EYA2O00167 538 aa16.47■□□□□ 0.23
ERCC3-209ENST00000494464 WNT10BO00744 389 aa16.47■□□□□ 0.23
ERCC3-209ENST00000494464 SASH1O94885 1247 aa16.47■□□□□ 0.23
ERCC3-209ENST00000494464 HIBADHP31937 336 aaKnown RBP16.47■□□□□ 0.23
ERCC3-209ENST00000494464 ZBED3Q96IU2 234 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-209ENST00000494464 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
ERCC3-209ENST00000494464 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
ERCC3-209ENST00000494464 GNAI3P08754 354 aa16.46■□□□□ 0.23
ERCC3-209ENST00000494464 GYG1P46976 350 aa16.46■□□□□ 0.23
ERCC3-209ENST00000494464 NBPF9Q3BBW0 867 aa16.46■□□□□ 0.23
ERCC3-209ENST00000494464 DLK2Q6UY11 383 aa16.46■□□□□ 0.23
ERCC3-209ENST00000494464 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
ERCC3-209ENST00000494464 COL1A1P02452 1464 aaPredicted RBP16.46■□□□□ 0.22
ERCC3-209ENST00000494464 CIAO1O76071 339 aa16.45■□□□□ 0.22
ERCC3-209ENST00000494464 FGFR2P21802 821 aa16.45■□□□□ 0.22
ERCC3-209ENST00000494464 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
ERCC3-209ENST00000494464 ERICH6BQ5W0A0 696 aa16.45■□□□□ 0.22
ERCC3-209ENST00000494464 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
ERCC3-209ENST00000494464 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-209ENST00000494464 FBXO33Q7Z6M2 555 aa16.45■□□□□ 0.22
ERCC3-209ENST00000494464 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-209ENST00000494464 CDCA5Q96FF9 252 aa16.45■□□□□ 0.22
ERCC3-209ENST00000494464 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-209ENST00000494464 MTX1Q13505 466 aa16.44■□□□□ 0.22
ERCC3-209ENST00000494464 CAVIN4Q5BKX8 364 aa16.44■□□□□ 0.22
ERCC3-209ENST00000494464 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
ERCC3-209ENST00000494464 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
ERCC3-209ENST00000494464 C2orf69Q8N8R5 385 aa16.44■□□□□ 0.22
ERCC3-209ENST00000494464 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
ERCC3-209ENST00000494464 HUNKP57058 714 aa16.43■□□□□ 0.22
ERCC3-209ENST00000494464 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
ERCC3-209ENST00000494464 APOBEC3FQ8IUX4 373 aaKnown RBP16.43■□□□□ 0.22
ERCC3-209ENST00000494464 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
ERCC3-209ENST00000494464 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
ERCC3-209ENST00000494464 IFIT1P09914 478 aaKnown RBP16.42■□□□□ 0.22
ERCC3-209ENST00000494464 MAP2K2P36507 400 aa16.42■□□□□ 0.22
ERCC3-209ENST00000494464 FKBP1BP68106 108 aa16.42■□□□□ 0.22
ERCC3-209ENST00000494464 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-209ENST00000494464 DLGAP5Q15398 846 aa16.42■□□□□ 0.22
ERCC3-209ENST00000494464 MFSD14BQ5SR56 506 aa16.42■□□□□ 0.22
ERCC3-209ENST00000494464 LPIN2Q92539 896 aa16.42■□□□□ 0.22
ERCC3-209ENST00000494464 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
ERCC3-209ENST00000494464 SLC5A1P13866 664 aa16.41■□□□□ 0.22
ERCC3-209ENST00000494464 IL15P40933 162 aaPredicted RBP16.41■□□□□ 0.22
ERCC3-209ENST00000494464 CLUAP1Q96AJ1 413 aa16.41■□□□□ 0.22
ERCC3-209ENST00000494464 AIDAQ96BJ3 306 aa16.41■□□□□ 0.22
ERCC3-209ENST00000494464 SIL1Q9H173 461 aa16.41■□□□□ 0.22
ERCC3-209ENST00000494464 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
ERCC3-209ENST00000494464 F8W031 263 aaPredicted RBP16.4■□□□□ 0.22
ERCC3-209ENST00000494464 FOXN1O15353 648 aa16.4■□□□□ 0.22
ERCC3-209ENST00000494464 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
ERCC3-209ENST00000494464 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
ERCC3-209ENST00000494464 TMEM57Q8N5G2 664 aa16.4■□□□□ 0.22
ERCC3-209ENST00000494464 TBC1D22AQ8WUA7 517 aa16.4■□□□□ 0.22
ERCC3-209ENST00000494464 GNAI2P04899 355 aa16.39■□□□□ 0.21
ERCC3-209ENST00000494464 NOGQ13253 232 aa16.39■□□□□ 0.21
ERCC3-209ENST00000494464 GRM1Q13255 1194 aa16.39■□□□□ 0.21
ERCC3-209ENST00000494464 RGMBQ6NW40 437 aa16.39■□□□□ 0.21
ERCC3-209ENST00000494464 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
ERCC3-209ENST00000494464 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
ERCC3-209ENST00000494464 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.21
ERCC3-209ENST00000494464 SRGAP3O43295 1099 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 MYO1BO43795 1136 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 AOC2O75106 756 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 BCAMP50895 628 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 TTF2Q9UNY4 1162 aaKnown RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 SCAF8Q9UPN6 1271 aaKnown RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 PPP2R3BQ9Y5P8 575 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 FAM155AB1AL88 458 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 ZBTB22O15209 634 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 NF2P35240 595 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
ERCC3-209ENST00000494464 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 PRDM10Q9NQV6 1147 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 SUGT1Q9Y2Z0 365 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 PCDHAC2Q9Y5I4 1007 aa16.38■□□□□ 0.21
ERCC3-209ENST00000494464 HDLBPQ00341 1268 aaKnown RBP16.37■□□□□ 0.21
ERCC3-209ENST00000494464 CHAF1AQ13111 956 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-209ENST00000494464 DZIP1LQ8IYY4 767 aaKnown RBP16.37■□□□□ 0.21
ERCC3-209ENST00000494464 PRMT6Q96LA8 375 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-209ENST00000494464 SLC10A3P09131 477 aa16.36■□□□□ 0.21
ERCC3-209ENST00000494464 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
ERCC3-209ENST00000494464 BEGAINQ9BUH8 593 aa16.36■□□□□ 0.21
ERCC3-209ENST00000494464 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
ERCC3-209ENST00000494464 MAST3O60307 1309 aa16.36■□□□□ 0.21
ERCC3-209ENST00000494464 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 CA12O43570 354 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
ERCC3-209ENST00000494464 CRKP46108 304 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 ZNF157P51786 506 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-209ENST00000494464 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
ERCC3-209ENST00000494464 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 PRAMEF18Q5VWM3 479 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms