RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ALDH1L2Q3SY69 923 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 RABL6Q3YEC7 729 aaPredicted RBP10.77□□□□□ -0.69
LRCH3-219ENST00000494069 C15orf52Q6ZUT6 534 aaKnown RBP10.77□□□□□ -0.69
LRCH3-219ENST00000494069 KIAA0825Q8IV33 1275 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 TNS4Q8IZW8 715 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 CERS5Q8N5B7 392 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 KLHDC4Q8TBB5 520 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 NOB1Q9ULX3 412 aaKnown RBP10.77□□□□□ -0.69
LRCH3-219ENST00000494069 WNT10BO00744 389 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 SASH1O94885 1247 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 HSPA8P11142 646 aaKnown RBP10.76□□□□□ -0.69
LRCH3-219ENST00000494069 CTCFP49711 727 aaPredicted RBP10.76□□□□□ -0.69
LRCH3-219ENST00000494069 MAP2K1Q02750 393 aaPredicted RBP10.76□□□□□ -0.69
LRCH3-219ENST00000494069 EVX2Q03828 476 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 LRRC24Q50LG9 513 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 MOB2Q70IA6 237 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 AIDAQ96BJ3 306 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 GBA2Q9HCG7 927 aaPredicted RBP10.76□□□□□ -0.69
LRCH3-219ENST00000494069 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 RIPOR2Q9Y4F9 1068 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 PCDHAC2Q9Y5I4 1007 aa10.76□□□□□ -0.69
LRCH3-219ENST00000494069 A0A1B0GUL6 1792 aa10.75□□□□□ -0.69
LRCH3-219ENST00000494069 F8W031 263 aaPredicted RBP10.75□□□□□ -0.69
LRCH3-219ENST00000494069 IL1R1P14778 569 aa10.75□□□□□ -0.69
LRCH3-219ENST00000494069 GYG1P46976 350 aa10.75□□□□□ -0.69
LRCH3-219ENST00000494069 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
LRCH3-219ENST00000494069 HHIPL1Q96JK4 782 aa10.75□□□□□ -0.69
LRCH3-219ENST00000494069 FAM155AB1AL88 458 aaPredicted RBP10.74□□□□□ -0.69
LRCH3-219ENST00000494069 MAP2K2P36507 400 aa10.74□□□□□ -0.69
LRCH3-219ENST00000494069 RARSP54136 660 aaKnown RBP10.74□□□□□ -0.69
LRCH3-219ENST00000494069 RGMBQ6NW40 437 aa10.74□□□□□ -0.69
LRCH3-219ENST00000494069 ZNF804AQ7Z570 1209 aa10.74□□□□□ -0.69
LRCH3-219ENST00000494069 C2orf69Q8N8R5 385 aa10.74□□□□□ -0.69
LRCH3-219ENST00000494069 FAM84BQ96KN1 310 aaPredicted RBP10.74□□□□□ -0.69
LRCH3-219ENST00000494069 PRDM10Q9NQV6 1147 aa10.74□□□□□ -0.69
LRCH3-219ENST00000494069 AOX1Q06278 1338 aa10.74□□□□□ -0.69
LRCH3-219ENST00000494069 MYO3BQ8WXR4 1341 aa10.74□□□□□ -0.69
LRCH3-219ENST00000494069 THSD7BQ9C0I4 1608 aa10.73□□□□□ -0.69
LRCH3-219ENST00000494069 RFX5P48382 616 aaPredicted RBP10.73□□□□□ -0.69
LRCH3-219ENST00000494069 UBE4AQ14139 1066 aa10.73□□□□□ -0.69
LRCH3-219ENST00000494069 METTL24Q5JXM2 366 aa10.73□□□□□ -0.69
LRCH3-219ENST00000494069 ZBED3Q96IU2 234 aaPredicted RBP10.73□□□□□ -0.69
LRCH3-219ENST00000494069 IQSEC3Q9UPP2 1182 aaPredicted RBP10.73□□□□□ -0.69
LRCH3-219ENST00000494069 TNNQ9UQP3 1299 aa10.73□□□□□ -0.69
LRCH3-219ENST00000494069 PITPNM2Q9BZ72 1349 aa10.73□□□□□ -0.69
LRCH3-219ENST00000494069 UBE2Q2LH0YL09 131 aa10.72□□□□□ -0.69
LRCH3-219ENST00000494069 HIBADHP31937 336 aaKnown RBP10.72□□□□□ -0.69
LRCH3-219ENST00000494069 ZNF157P51786 506 aaPredicted RBP10.72□□□□□ -0.69
LRCH3-219ENST00000494069 GRIK5Q16478 980 aa10.72□□□□□ -0.69
LRCH3-219ENST00000494069 DIEXFQ68CQ4 756 aaKnown RBP10.72□□□□□ -0.69
LRCH3-219ENST00000494069 VGLL2Q8N8G2 317 aa10.72□□□□□ -0.69
LRCH3-219ENST00000494069 TDRD7Q8NHU6 1098 aaKnown RBP10.72□□□□□ -0.69
LRCH3-219ENST00000494069 PRMT6Q96LA8 375 aaPredicted RBP10.72□□□□□ -0.69
LRCH3-219ENST00000494069 HDAC9Q9UKV0 1011 aa10.72□□□□□ -0.69
LRCH3-219ENST00000494069 MROH5Q6ZUA9 1318 aa10.72□□□□□ -0.69
LRCH3-219ENST00000494069 BCAR3O75815 825 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 PDE8BO95263 885 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 CT47B1P0C2W7 299 aaPredicted RBP10.71□□□□□ -0.69
LRCH3-219ENST00000494069 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.69
LRCH3-219ENST00000494069 KIF23Q02241 960 aaPredicted RBP10.71□□□□□ -0.69
LRCH3-219ENST00000494069 PTPN12Q05209 780 aaKnown RBP10.71□□□□□ -0.69
LRCH3-219ENST00000494069 NOGQ13253 232 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 PRKG1Q13976 671 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 DLGAP5Q15398 846 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 CFAP100Q494V2 611 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 FAM205AQ6ZU69 1335 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 FBXO33Q7Z6M2 555 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 MEIS3Q99687 375 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 BEGAINQ9BUH8 593 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
LRCH3-219ENST00000494069 FZD1Q9UP38 647 aa10.71□□□□□ -0.69
LRCH3-219ENST00000494069 CLRN2A0PK11 232 aa10.7□□□□□ -0.7
LRCH3-219ENST00000494069 SLC10A3P09131 477 aa10.7□□□□□ -0.7
LRCH3-219ENST00000494069 UBTFL1P0CB47 393 aaPredicted RBP10.7□□□□□ -0.7
LRCH3-219ENST00000494069 BCAMP50895 628 aa10.7□□□□□ -0.7
LRCH3-219ENST00000494069 FKBP1AP62942 108 aaKnown RBP10.7□□□□□ -0.7
LRCH3-219ENST00000494069 CHAF1AQ13111 956 aaPredicted RBP10.7□□□□□ -0.7
LRCH3-219ENST00000494069 ATG9AQ7Z3C6 839 aa10.7□□□□□ -0.7
LRCH3-219ENST00000494069 LRRFIP2Q9Y608 721 aaKnown RBP10.7□□□□□ -0.7
LRCH3-219ENST00000494069 EYA2O00167 538 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 FGFR2P21802 821 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 HNRNPUQ00839 825 aaKnown RBP eCLIP10.69□□□□□ -0.7
LRCH3-219ENST00000494069 TTLL12Q14166 644 aaPredicted RBP10.69□□□□□ -0.7
LRCH3-219ENST00000494069 MFSD14BQ5SR56 506 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 RASAL3Q86YV0 1011 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 CSRNP1Q96S65 589 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 SIL1Q9H173 461 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 DEFB129Q9H1M3 183 aa10.69□□□□□ -0.7
LRCH3-219ENST00000494069 PA2G4Q9UQ80 394 aaKnown RBP10.69□□□□□ -0.7
LRCH3-219ENST00000494069 MMP14P50281 582 aa10.68□□□□□ -0.7
LRCH3-219ENST00000494069 RBM5P52756 815 aaKnown RBP eCLIP10.68□□□□□ -0.7
LRCH3-219ENST00000494069 FKBP1BP68106 108 aa10.68□□□□□ -0.7
LRCH3-219ENST00000494069 VPS37DQ86XT2 251 aa10.68□□□□□ -0.7
LRCH3-219ENST00000494069 APOBEC3FQ8IUX4 373 aaKnown RBP10.68□□□□□ -0.7
LRCH3-219ENST00000494069 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
LRCH3-219ENST00000494069 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
LRCH3-219ENST00000494069 TTF2Q9UNY4 1162 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms