RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CDCA5Q96FF9 252 aa15.86■□□□□ 0.13
HSPG2-212ENST00000493940 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
HSPG2-212ENST00000493940 MOB2Q70IA6 237 aa15.85■□□□□ 0.13
HSPG2-212ENST00000493940 ATG9AQ7Z3C6 839 aa15.85■□□□□ 0.13
HSPG2-212ENST00000493940 TDRD7Q8NHU6 1098 aaKnown RBP15.85■□□□□ 0.13
HSPG2-212ENST00000493940 F8W031 263 aaPredicted RBP15.84■□□□□ 0.13
HSPG2-212ENST00000493940 FGFR2P21802 821 aa15.84■□□□□ 0.13
HSPG2-212ENST00000493940 INTS3Q68E01 1043 aaKnown RBP15.84■□□□□ 0.13
HSPG2-212ENST00000493940 PAXIP1Q6ZW49 1069 aaPredicted RBP15.84■□□□□ 0.13
HSPG2-212ENST00000493940 FBXO33Q7Z6M2 555 aa15.84■□□□□ 0.13
HSPG2-212ENST00000493940 ABHD8Q96I13 439 aa15.84■□□□□ 0.13
HSPG2-212ENST00000493940 API5Q9BZZ5 524 aaKnown RBP15.84■□□□□ 0.13
HSPG2-212ENST00000493940 IQSEC3Q9UPP2 1182 aaPredicted RBP15.84■□□□□ 0.13
HSPG2-212ENST00000493940 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
HSPG2-212ENST00000493940 PDE8BO95263 885 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 TRIM27P14373 513 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 ECE1P42892 770 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 ZNF804AQ7Z570 1209 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 ARHGAP45Q92619 1136 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 PA2G4Q9UQ80 394 aaKnown RBP15.83■□□□□ 0.12
HSPG2-212ENST00000493940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.83■□□□□ 0.12
HSPG2-212ENST00000493940 AKAP11Q9UKA4 1901 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 MROH5Q6ZUA9 1318 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 MYO3BQ8WXR4 1341 aa15.83■□□□□ 0.12
HSPG2-212ENST00000493940 FAM155AB1AL88 458 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-212ENST00000493940 UBTFL1P0CB47 393 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-212ENST00000493940 HIBADHP31937 336 aaKnown RBP15.82■□□□□ 0.12
HSPG2-212ENST00000493940 BCAMP50895 628 aa15.82■□□□□ 0.12
HSPG2-212ENST00000493940 HUNKP57058 714 aa15.82■□□□□ 0.12
HSPG2-212ENST00000493940 METTL24Q5JXM2 366 aa15.82■□□□□ 0.12
HSPG2-212ENST00000493940 SULF1Q8IWU6 871 aa15.82■□□□□ 0.12
HSPG2-212ENST00000493940 CLUAP1Q96AJ1 413 aa15.82■□□□□ 0.12
HSPG2-212ENST00000493940 PRMT6Q96LA8 375 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-212ENST00000493940 GBA2Q9HCG7 927 aaPredicted RBP15.82■□□□□ 0.12
HSPG2-212ENST00000493940 FAM205AQ6ZU69 1335 aa15.82■□□□□ 0.12
HSPG2-212ENST00000493940 EYA2O00167 538 aa15.81■□□□□ 0.12
HSPG2-212ENST00000493940 OGFOD1Q8N543 542 aa15.81■□□□□ 0.12
HSPG2-212ENST00000493940 FRAT1Q92837 279 aaPredicted RBP15.81■□□□□ 0.12
HSPG2-212ENST00000493940 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
HSPG2-212ENST00000493940 PITPNM2Q9BZ72 1349 aa15.81■□□□□ 0.12
HSPG2-212ENST00000493940 SIL1Q9H173 461 aa15.81■□□□□ 0.12
HSPG2-212ENST00000493940 FZD1Q9UP38 647 aa15.81■□□□□ 0.12
HSPG2-212ENST00000493940 MAP2K2P36507 400 aa15.8■□□□□ 0.12
HSPG2-212ENST00000493940 BEGAINQ9BUH8 593 aa15.8■□□□□ 0.12
HSPG2-212ENST00000493940 TSKSQ9UJT2 592 aa15.8■□□□□ 0.12
HSPG2-212ENST00000493940 PAPPA2Q9BXP8 1791 aa15.8■□□□□ 0.12
HSPG2-212ENST00000493940 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
HSPG2-212ENST00000493940 FKBP1AP62942 108 aaKnown RBP15.79■□□□□ 0.12
HSPG2-212ENST00000493940 CFAP100Q494V2 611 aa15.79■□□□□ 0.12
HSPG2-212ENST00000493940 ATF7IPQ6VMQ6 1270 aa15.79■□□□□ 0.12
HSPG2-212ENST00000493940 MTMR14Q8NCE2 650 aa15.79■□□□□ 0.12
HSPG2-212ENST00000493940 COL1A1P02452 1464 aaPredicted RBP15.78■□□□□ 0.12
HSPG2-212ENST00000493940 UBE2Q2LH0YL09 131 aa15.78■□□□□ 0.12
HSPG2-212ENST00000493940 RLBP1P12271 317 aa15.78■□□□□ 0.12
HSPG2-212ENST00000493940 RGMBQ6NW40 437 aa15.78■□□□□ 0.12
HSPG2-212ENST00000493940 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
HSPG2-212ENST00000493940 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
HSPG2-212ENST00000493940 CLRN2A0PK11 232 aa15.77■□□□□ 0.12
HSPG2-212ENST00000493940 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
HSPG2-212ENST00000493940 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
HSPG2-212ENST00000493940 DLGAP5Q15398 846 aa15.77■□□□□ 0.12
HSPG2-212ENST00000493940 MFSD14BQ5SR56 506 aa15.77■□□□□ 0.12
HSPG2-212ENST00000493940 HDAC9Q9UKV0 1011 aa15.77■□□□□ 0.12
HSPG2-212ENST00000493940 SSC5DA1L4H1 1573 aa15.77■□□□□ 0.11
HSPG2-212ENST00000493940 MYO5AQ9Y4I1 1855 aaKnown RBP15.77■□□□□ 0.11
HSPG2-212ENST00000493940 OTOFQ9HC10 1997 aa15.76■□□□□ 0.11
HSPG2-212ENST00000493940 MYH2Q9UKX2 1941 aa15.76■□□□□ 0.11
HSPG2-212ENST00000493940 ZBED9Q6R2W3 1325 aa15.76■□□□□ 0.11
HSPG2-212ENST00000493940 RGS19P49795 217 aa15.76■□□□□ 0.11
HSPG2-212ENST00000493940 ZNF157P51786 506 aaPredicted RBP15.76■□□□□ 0.11
HSPG2-212ENST00000493940 CHAF1AQ13111 956 aaPredicted RBP15.76■□□□□ 0.11
HSPG2-212ENST00000493940 COPRSQ9NQ92 184 aa15.76■□□□□ 0.11
HSPG2-212ENST00000493940 TTF2Q9UNY4 1162 aaKnown RBP15.76■□□□□ 0.11
HSPG2-212ENST00000493940 PNMA6EA0A0J9YXQ4 647 aa15.75■□□□□ 0.11
HSPG2-212ENST00000493940 CA12O43570 354 aa15.75■□□□□ 0.11
HSPG2-212ENST00000493940 CIAO1O76071 339 aa15.75■□□□□ 0.11
HSPG2-212ENST00000493940 ADORA1P30542 326 aa15.75■□□□□ 0.11
HSPG2-212ENST00000493940 KIF23Q02241 960 aaPredicted RBP15.75■□□□□ 0.11
HSPG2-212ENST00000493940 PRKG1Q13976 671 aa15.75■□□□□ 0.11
HSPG2-212ENST00000493940 PUM3Q15397 648 aaKnown RBP15.75■□□□□ 0.11
HSPG2-212ENST00000493940 CDAN1Q8IWY9 1227 aa15.75■□□□□ 0.11
HSPG2-212ENST00000493940 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
HSPG2-212ENST00000493940 SLC34A2O95436 690 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 SLC10A3P09131 477 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 MMP14P50281 582 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 TIMM10P62072 90 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 MTX1Q13505 466 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 RASAL3Q86YV0 1011 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 LPIN2Q92539 896 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 DEFB129Q9H1M3 183 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 TDRD3Q9H7E2 651 aaKnown RBP15.74■□□□□ 0.11
HSPG2-212ENST00000493940 AK9Q5TCS8 1911 aa15.74■□□□□ 0.11
HSPG2-212ENST00000493940 CCDC85CA6NKD9 419 aa15.73■□□□□ 0.11
HSPG2-212ENST00000493940 GNAI3P08754 354 aa15.73■□□□□ 0.11
HSPG2-212ENST00000493940 CAVIN4Q5BKX8 364 aa15.73■□□□□ 0.11
HSPG2-212ENST00000493940 NBPF12Q5TAG4 269 aaPredicted RBP15.73■□□□□ 0.11
HSPG2-212ENST00000493940 ZKSCAN2Q63HK3 967 aa15.73■□□□□ 0.11
HSPG2-212ENST00000493940 CSRNP1Q96S65 589 aa15.73■□□□□ 0.11
HSPG2-212ENST00000493940 LAMB1P07942 1786 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 SRGAP3O43295 1099 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms