RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PITPNM2Q9BZ72 1349 aa28.18■■■□□ 2.1
SNIP1-203ENST00000493916 IFIT1P09914 478 aaKnown RBP28.17■■■□□ 2.1
SNIP1-203ENST00000493916 VPS37DQ86XT2 251 aa28.17■■■□□ 2.1
SNIP1-203ENST00000493916 LPIN2Q92539 896 aa28.17■■■□□ 2.1
SNIP1-203ENST00000493916 PA2G4Q9UQ80 394 aaKnown RBP28.17■■■□□ 2.1
SNIP1-203ENST00000493916 ARAP2Q8WZ64 1704 aa28.17■■■□□ 2.1
SNIP1-203ENST00000493916 CELF2O95319 508 aaKnown RBP28.16■■■□□ 2.1
SNIP1-203ENST00000493916 ANGEL2Q5VTE6 544 aaKnown RBP28.16■■■□□ 2.1
SNIP1-203ENST00000493916 ABT1Q9ULW3 272 aaKnown RBP28.16■■■□□ 2.1
SNIP1-203ENST00000493916 SLC5A1P13866 664 aa28.15■■■□□ 2.1
SNIP1-203ENST00000493916 ITPRIPQ8IWB1 547 aa28.15■■■□□ 2.1
SNIP1-203ENST00000493916 SULF1Q8IWU6 871 aa28.15■■■□□ 2.1
SNIP1-203ENST00000493916 CEP126Q9P2H0 1117 aa28.15■■■□□ 2.1
SNIP1-203ENST00000493916 ADM5C9JUS6 153 aa28.14■■■□□ 2.1
SNIP1-203ENST00000493916 WNT10BO00744 389 aa28.14■■■□□ 2.1
SNIP1-203ENST00000493916 JAG2Q9Y219 1238 aa28.14■■■□□ 2.1
SNIP1-203ENST00000493916 TLL2Q9Y6L7 1015 aa28.14■■■□□ 2.1
SNIP1-203ENST00000493916 PCNTO95613 3336 aa28.14■■■□□ 2.1
SNIP1-203ENST00000493916 NBPF9Q3BBW0 867 aa28.13■■■□□ 2.09
SNIP1-203ENST00000493916 ZBED3Q96IU2 234 aaPredicted RBP28.13■■■□□ 2.09
SNIP1-203ENST00000493916 BCAMP50895 628 aa28.12■■■□□ 2.09
SNIP1-203ENST00000493916 ATP2B3Q16720 1220 aa28.12■■■□□ 2.09
SNIP1-203ENST00000493916 DEFB115Q30KQ5 88 aa28.12■■■□□ 2.09
SNIP1-203ENST00000493916 MFSD14BQ5SR56 506 aa28.12■■■□□ 2.09
SNIP1-203ENST00000493916 MTMR14Q8NCE2 650 aa28.12■■■□□ 2.09
SNIP1-203ENST00000493916 RCAN3Q9UKA8 241 aa28.12■■■□□ 2.09
SNIP1-203ENST00000493916 ZBTB7BO15156 539 aaPredicted RBP28.11■■■□□ 2.09
SNIP1-203ENST00000493916 MS4A1P11836 297 aa28.11■■■□□ 2.09
SNIP1-203ENST00000493916 ZNF408Q9H9D4 720 aa28.11■■■□□ 2.09
SNIP1-203ENST00000493916 POLR2AP24928 1970 aaKnown RBP28.1■■■□□ 2.09
SNIP1-203ENST00000493916 PNMA6EA0A0J9YXQ4 647 aa28.1■■■□□ 2.09
SNIP1-203ENST00000493916 VEGFBP49765 207 aa28.1■■■□□ 2.09
SNIP1-203ENST00000493916 DLK2Q6UY11 383 aa28.1■■■□□ 2.09
SNIP1-203ENST00000493916 SAPCD2Q86UD0 394 aa28.09■■■□□ 2.09
SNIP1-203ENST00000493916 PANK1Q8TE04 598 aa28.09■■■□□ 2.09
SNIP1-203ENST00000493916 TBC1D22AQ8WUA7 517 aa28.09■■■□□ 2.09
SNIP1-203ENST00000493916 HHIPL1Q96JK4 782 aa28.09■■■□□ 2.09
SNIP1-203ENST00000493916 IQSEC3Q9UPP2 1182 aaPredicted RBP28.09■■■□□ 2.09
SNIP1-203ENST00000493916 F8W031 263 aaPredicted RBP28.08■■■□□ 2.09
SNIP1-203ENST00000493916 FRAT2O75474 233 aaPredicted RBP28.08■■■□□ 2.09
SNIP1-203ENST00000493916 DLGAP5Q15398 846 aa28.08■■■□□ 2.09
SNIP1-203ENST00000493916 CDCA5Q96FF9 252 aa28.08■■■□□ 2.09
SNIP1-203ENST00000493916 POLA2Q14181 598 aa28.07■■■□□ 2.08
SNIP1-203ENST00000493916 THSD7BQ9C0I4 1608 aa28.07■■■□□ 2.08
SNIP1-203ENST00000493916 CHAF1AQ13111 956 aaPredicted RBP28.06■■■□□ 2.08
SNIP1-203ENST00000493916 CFAP100Q494V2 611 aa28.06■■■□□ 2.08
SNIP1-203ENST00000493916 SPDYE2BA6NHP3 402 aa28.05■■■□□ 2.08
SNIP1-203ENST00000493916 SPDYE6P0CI01 402 aa28.05■■■□□ 2.08
SNIP1-203ENST00000493916 ATP8B2P98198 1209 aa28.05■■■□□ 2.08
SNIP1-203ENST00000493916 ECM29Q5VYK3 1845 aa28.05■■■□□ 2.08
SNIP1-203ENST00000493916 APOBEC3FQ8IUX4 373 aaKnown RBP28.05■■■□□ 2.08
SNIP1-203ENST00000493916 SSH3Q8TE77 659 aa28.05■■■□□ 2.08
SNIP1-203ENST00000493916 C1orf115Q9H7X2 142 aa28.05■■■□□ 2.08
SNIP1-203ENST00000493916 SERPINA10Q9UK55 444 aa28.05■■■□□ 2.08
SNIP1-203ENST00000493916 TTF2Q9UNY4 1162 aaKnown RBP28.05■■■□□ 2.08
SNIP1-203ENST00000493916 COL1A1P02452 1464 aaPredicted RBP28.04■■■□□ 2.08
SNIP1-203ENST00000493916 WDR33Q9C0J8 1336 aaKnown RBP28.04■■■□□ 2.08
SNIP1-203ENST00000493916 ZBTB22O15209 634 aa28.04■■■□□ 2.08
SNIP1-203ENST00000493916 TFCP2Q12800 502 aa28.04■■■□□ 2.08
SNIP1-203ENST00000493916 GBA2Q9HCG7 927 aaPredicted RBP28.04■■■□□ 2.08
SNIP1-203ENST00000493916 AKAP2Q9Y2D5 859 aa28.04■■■□□ 2.08
SNIP1-203ENST00000493916 MYH13Q9UKX3 1938 aa28.03■■■□□ 2.08
SNIP1-203ENST00000493916 ECE1P42892 770 aa28.03■■■□□ 2.08
SNIP1-203ENST00000493916 CAPNS2Q96L46 248 aa28.03■■■□□ 2.08
SNIP1-203ENST00000493916 SUGT1Q9Y2Z0 365 aa28.03■■■□□ 2.08
SNIP1-203ENST00000493916 MVPQ14764 893 aaKnown RBP28.02■■■□□ 2.08
SNIP1-203ENST00000493916 C2orf69Q8N8R5 385 aa28.02■■■□□ 2.08
SNIP1-203ENST00000493916 GNL3LQ9NVN8 582 aaKnown RBP28.02■■■□□ 2.08
SNIP1-203ENST00000493916 SCAF8Q9UPN6 1271 aaKnown RBP28.02■■■□□ 2.08
SNIP1-203ENST00000493916 PCDHAC2Q9Y5I4 1007 aa28.02■■■□□ 2.08
SNIP1-203ENST00000493916 SEMA3EO15041 775 aa28.01■■■□□ 2.07
SNIP1-203ENST00000493916 MYO1BO43795 1136 aa28.01■■■□□ 2.07
SNIP1-203ENST00000493916 G3BP1Q13283 466 aaKnown RBP eCLIP28.01■■■□□ 2.07
SNIP1-203ENST00000493916 CYP4F22Q6NT55 531 aa28.01■■■□□ 2.07
SNIP1-203ENST00000493916 PRMT6Q96LA8 375 aaPredicted RBP28.01■■■□□ 2.07
SNIP1-203ENST00000493916 PAPPA2Q9BXP8 1791 aa28.01■■■□□ 2.07
SNIP1-203ENST00000493916 A0A1B0GUL7 405 aa28■■■□□ 2.07
SNIP1-203ENST00000493916 ADORA1P30542 326 aa28■■■□□ 2.07
SNIP1-203ENST00000493916 HUNKP57058 714 aa28■■■□□ 2.07
SNIP1-203ENST00000493916 HDLBPQ00341 1268 aaKnown RBP28■■■□□ 2.07
SNIP1-203ENST00000493916 GRIK5Q16478 980 aa28■■■□□ 2.07
SNIP1-203ENST00000493916 PAXIP1Q6ZW49 1069 aaPredicted RBP28■■■□□ 2.07
SNIP1-203ENST00000493916 WDR66Q8TBY9 1149 aa28■■■□□ 2.07
SNIP1-203ENST00000493916 PHKA1P46020 1223 aa27.99■■■□□ 2.07
SNIP1-203ENST00000493916 RBM5P52756 815 aaKnown RBP eCLIP27.99■■■□□ 2.07
SNIP1-203ENST00000493916 TIMM10P62072 90 aa27.99■■■□□ 2.07
SNIP1-203ENST00000493916 FKBP1BP68106 108 aa27.99■■■□□ 2.07
SNIP1-203ENST00000493916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.99■■■□□ 2.07
SNIP1-203ENST00000493916 MAST3O60307 1309 aa27.98■■■□□ 2.07
SNIP1-203ENST00000493916 HSPA1AP0DMV8 641 aaKnown RBP27.98■■■□□ 2.07
SNIP1-203ENST00000493916 HSPA1BP0DMV9 641 aaKnown RBP27.98■■■□□ 2.07
SNIP1-203ENST00000493916 CRKP46108 304 aa27.98■■■□□ 2.07
SNIP1-203ENST00000493916 CCDC102BQ68D86 513 aa27.98■■■□□ 2.07
SNIP1-203ENST00000493916 CEP85Q6P2H3 762 aa27.98■■■□□ 2.07
SNIP1-203ENST00000493916 DDX19BQ9UMR2 479 aa27.98■■■□□ 2.07
SNIP1-203ENST00000493916 AOX1Q06278 1338 aa27.97■■■□□ 2.07
SNIP1-203ENST00000493916 XAGE2Q96GT9 111 aa27.97■■■□□ 2.07
SNIP1-203ENST00000493916 MRIQ9BWK5 157 aa27.97■■■□□ 2.07
SNIP1-203ENST00000493916 DENND2AQ9ULE3 1009 aa27.97■■■□□ 2.07
SNIP1-203ENST00000493916 PPP2R3BQ9Y5P8 575 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms