RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 PUM3Q15397 648 aaKnown RBP16.96■□□□□ 0.31
IRF1-210ENST00000493208 COL13A1Q5TAT6 717 aaPredicted RBP16.96■□□□□ 0.31
IRF1-210ENST00000493208 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
IRF1-210ENST00000493208 COL1A1P02452 1464 aaPredicted RBP16.96■□□□□ 0.31
IRF1-210ENST00000493208 SCN9AQ15858 1988 aa16.95■□□□□ 0.3
IRF1-210ENST00000493208 PDE8BO95263 885 aa16.95■□□□□ 0.3
IRF1-210ENST00000493208 SLC5A1P13866 664 aa16.95■□□□□ 0.3
IRF1-210ENST00000493208 KLRK1P26718 216 aa16.95■□□□□ 0.3
IRF1-210ENST00000493208 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
IRF1-210ENST00000493208 MTMR14Q8NCE2 650 aa16.95■□□□□ 0.3
IRF1-210ENST00000493208 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
IRF1-210ENST00000493208 MAST3O60307 1309 aa16.95■□□□□ 0.3
IRF1-210ENST00000493208 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
IRF1-210ENST00000493208 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
IRF1-210ENST00000493208 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
IRF1-210ENST00000493208 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
IRF1-210ENST00000493208 FAM205AQ6ZU69 1335 aa16.94■□□□□ 0.3
IRF1-210ENST00000493208 WTIPA6NIX2 430 aaPredicted RBP16.93■□□□□ 0.3
IRF1-210ENST00000493208 EYA2O00167 538 aa16.93■□□□□ 0.3
IRF1-210ENST00000493208 PPP1R12BO60237 982 aaPredicted RBP16.93■□□□□ 0.3
IRF1-210ENST00000493208 LBX1P52954 281 aa16.93■□□□□ 0.3
IRF1-210ENST00000493208 SUPT20HL1Q3ZLR7 823 aa16.93■□□□□ 0.3
IRF1-210ENST00000493208 ANKRD44Q8N8A2 993 aa16.93■□□□□ 0.3
IRF1-210ENST00000493208 TDRD7Q8NHU6 1098 aaKnown RBP16.93■□□□□ 0.3
IRF1-210ENST00000493208 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
IRF1-210ENST00000493208 F8W031 263 aaPredicted RBP16.92■□□□□ 0.3
IRF1-210ENST00000493208 CIAO1O76071 339 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 TNNI2P48788 182 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 LPIN2Q92539 896 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 MXD3Q9BW11 206 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 CEP126Q9P2H0 1117 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 SERPINA10Q9UK55 444 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 SUGT1Q9Y2Z0 365 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
IRF1-210ENST00000493208 AOC2O75106 756 aa16.91■□□□□ 0.3
IRF1-210ENST00000493208 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
IRF1-210ENST00000493208 GYG1P46976 350 aa16.91■□□□□ 0.3
IRF1-210ENST00000493208 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
IRF1-210ENST00000493208 FAM84BQ96KN1 310 aaPredicted RBP16.91■□□□□ 0.3
IRF1-210ENST00000493208 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
IRF1-210ENST00000493208 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
IRF1-210ENST00000493208 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
IRF1-210ENST00000493208 TTF2Q9UNY4 1162 aaKnown RBP16.91■□□□□ 0.3
IRF1-210ENST00000493208 IRS2Q9Y4H2 1338 aa16.91■□□□□ 0.3
IRF1-210ENST00000493208 PAPPA2Q9BXP8 1791 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 SNAP23O00161 211 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
IRF1-210ENST00000493208 LRRC24Q50LG9 513 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
IRF1-210ENST00000493208 ATF7IPQ6VMQ6 1270 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
IRF1-210ENST00000493208 HOOK2Q96ED9 719 aa16.9■□□□□ 0.3
IRF1-210ENST00000493208 ASTN2O75129 1339 aaPredicted RBP16.9■□□□□ 0.3
IRF1-210ENST00000493208 SLC10A3P09131 477 aa16.89■□□□□ 0.29
IRF1-210ENST00000493208 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
IRF1-210ENST00000493208 ZKSCAN2Q63HK3 967 aa16.89■□□□□ 0.29
IRF1-210ENST00000493208 FBXO33Q7Z6M2 555 aa16.89■□□□□ 0.29
IRF1-210ENST00000493208 FTSJ3Q8IY81 847 aaKnown RBP16.89■□□□□ 0.29
IRF1-210ENST00000493208 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
IRF1-210ENST00000493208 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
IRF1-210ENST00000493208 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
IRF1-210ENST00000493208 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
IRF1-210ENST00000493208 SREBF2Q12772 1141 aa16.88■□□□□ 0.29
IRF1-210ENST00000493208 MIER1Q8N108 512 aa16.88■□□□□ 0.29
IRF1-210ENST00000493208 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
IRF1-210ENST00000493208 LRRFIP2Q9Y608 721 aaKnown RBP16.88■□□□□ 0.29
IRF1-210ENST00000493208 PCNTO95613 3336 aa16.88■□□□□ 0.29
IRF1-210ENST00000493208 SEMA3EO15041 775 aa16.87■□□□□ 0.29
IRF1-210ENST00000493208 GNAI2P04899 355 aa16.87■□□□□ 0.29
IRF1-210ENST00000493208 MS4A1P11836 297 aa16.87■□□□□ 0.29
IRF1-210ENST00000493208 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
IRF1-210ENST00000493208 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
IRF1-210ENST00000493208 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
IRF1-210ENST00000493208 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
IRF1-210ENST00000493208 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
IRF1-210ENST00000493208 CERS5Q8N5B7 392 aa16.87■□□□□ 0.29
IRF1-210ENST00000493208 VGLL2Q8N8G2 317 aa16.87■□□□□ 0.29
IRF1-210ENST00000493208 ZBED3Q96IU2 234 aaPredicted RBP16.87■□□□□ 0.29
IRF1-210ENST00000493208 ATP2B3Q16720 1220 aa16.86■□□□□ 0.29
IRF1-210ENST00000493208 KLHDC4Q8TBB5 520 aa16.86■□□□□ 0.29
IRF1-210ENST00000493208 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
IRF1-210ENST00000493208 SIL1Q9H173 461 aa16.86■□□□□ 0.29
IRF1-210ENST00000493208 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
IRF1-210ENST00000493208 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
IRF1-210ENST00000493208 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
IRF1-210ENST00000493208 RASAL3Q86YV0 1011 aa16.85■□□□□ 0.29
IRF1-210ENST00000493208 SLF2Q8IX21 1173 aa16.85■□□□□ 0.29
IRF1-210ENST00000493208 COPRSQ9NQ92 184 aa16.85■□□□□ 0.29
IRF1-210ENST00000493208 DENND2AQ9ULE3 1009 aa16.85■□□□□ 0.29
IRF1-210ENST00000493208 ANGEL1Q9UNK9 670 aaKnown RBP16.85■□□□□ 0.29
IRF1-210ENST00000493208 ZBED9Q6R2W3 1325 aa16.85■□□□□ 0.29
IRF1-210ENST00000493208 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
IRF1-210ENST00000493208 CLRN2A0PK11 232 aa16.84■□□□□ 0.29
IRF1-210ENST00000493208 UBE2Q2LH0YL09 131 aa16.84■□□□□ 0.29
IRF1-210ENST00000493208 ALDH1A1P00352 501 aa16.84■□□□□ 0.29
IRF1-210ENST00000493208 CRKP46108 304 aa16.84■□□□□ 0.29
IRF1-210ENST00000493208 RFX5P48382 616 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms