RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 AACSQ86V21 672 aa20.73■□□□□ 0.91
RER1-208ENST00000493207 EAF2Q96CJ1 260 aaPredicted RBP20.73■□□□□ 0.91
RER1-208ENST00000493207 DBNDD2Q9BQY9 259 aa20.73■□□□□ 0.91
RER1-208ENST00000493207 CCDC8Q9H0W5 538 aaPredicted RBP20.73■□□□□ 0.91
RER1-208ENST00000493207 GNL3LQ9NVN8 582 aaKnown RBP20.73■□□□□ 0.91
RER1-208ENST00000493207 SHTN1A0MZ66 631 aa20.72■□□□□ 0.91
RER1-208ENST00000493207 KIF3CO14782 793 aa20.72■□□□□ 0.91
RER1-208ENST00000493207 MICALL2Q8IY33 904 aa20.72■□□□□ 0.91
RER1-208ENST00000493207 CLASRPQ8N2M8 674 aaKnown RBP20.72■□□□□ 0.91
RER1-208ENST00000493207 AGBL3Q8NEM8 1001 aa20.72■□□□□ 0.91
RER1-208ENST00000493207 DPF2Q92785 391 aa20.72■□□□□ 0.91
RER1-208ENST00000493207 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
RER1-208ENST00000493207 TLR7Q9NYK1 1049 aaKnown RBP20.72■□□□□ 0.91
RER1-208ENST00000493207 CNOT7Q9UIV1 285 aaKnown RBP20.72■□□□□ 0.91
RER1-208ENST00000493207 COL1A1P02452 1464 aaPredicted RBP20.72■□□□□ 0.91
RER1-208ENST00000493207 FAM205AQ6ZU69 1335 aa20.72■□□□□ 0.91
RER1-208ENST00000493207 SMARCA5O60264 1052 aaPredicted RBP20.71■□□□□ 0.91
RER1-208ENST00000493207 EPHX2P34913 555 aa20.71■□□□□ 0.91
RER1-208ENST00000493207 GMLQ99445 158 aa20.71■□□□□ 0.91
RER1-208ENST00000493207 TAF1DQ9H5J8 278 aaPredicted RBP20.71■□□□□ 0.91
RER1-208ENST00000493207 DBNLQ9UJU6 430 aaKnown RBP20.71■□□□□ 0.91
RER1-208ENST00000493207 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
RER1-208ENST00000493207 CERS5Q8N5B7 392 aa20.7■□□□□ 0.9
RER1-208ENST00000493207 RWDD1Q9H446 243 aaPredicted RBP20.7■□□□□ 0.9
RER1-208ENST00000493207 H7C1D1 291 aa20.69■□□□□ 0.9
RER1-208ENST00000493207 FKBP1AP62942 108 aaKnown RBP20.69■□□□□ 0.9
RER1-208ENST00000493207 MFSD14BQ5SR56 506 aa20.69■□□□□ 0.9
RER1-208ENST00000493207 TTC39AQ5SRH9 613 aa20.69■□□□□ 0.9
RER1-208ENST00000493207 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
RER1-208ENST00000493207 DENND2AQ9ULE3 1009 aa20.69■□□□□ 0.9
RER1-208ENST00000493207 SEMA3EO15041 775 aa20.68■□□□□ 0.9
RER1-208ENST00000493207 IGHDP01880 384 aa20.68■□□□□ 0.9
RER1-208ENST00000493207 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
RER1-208ENST00000493207 USP17L8P0C7I0 530 aa20.68■□□□□ 0.9
RER1-208ENST00000493207 ARID4AP29374 1257 aaPredicted RBP20.68■□□□□ 0.9
RER1-208ENST00000493207 RASGRF1Q13972 1273 aa20.68■□□□□ 0.9
RER1-208ENST00000493207 EAPPQ56P03 285 aaPredicted RBP20.68■□□□□ 0.9
RER1-208ENST00000493207 CCDC158Q5M9N0 1113 aa20.68■□□□□ 0.9
RER1-208ENST00000493207 KIAA0825Q8IV33 1275 aa20.68■□□□□ 0.9
RER1-208ENST00000493207 ADARB2Q9NS39 739 aaKnown RBP20.68■□□□□ 0.9
RER1-208ENST00000493207 F8W031 263 aaPredicted RBP20.67■□□□□ 0.9
RER1-208ENST00000493207 TBC1D22AQ8WUA7 517 aa20.67■□□□□ 0.9
RER1-208ENST00000493207 GCC1Q96CN9 775 aa20.67■□□□□ 0.9
RER1-208ENST00000493207 ADAMTSL1Q8N6G6 1762 aa20.67■□□□□ 0.9
RER1-208ENST00000493207 UQCRFS1P1P0C7P4 283 aa20.66■□□□□ 0.9
RER1-208ENST00000493207 SAMD7Q7Z3H4 446 aa20.66■□□□□ 0.9
RER1-208ENST00000493207 PNMA8AQ86V59 439 aaPredicted RBP20.66■□□□□ 0.9
RER1-208ENST00000493207 WDR66Q8TBY9 1149 aa20.66■□□□□ 0.9
RER1-208ENST00000493207 AKAP11Q9UKA4 1901 aa20.66■□□□□ 0.9
RER1-208ENST00000493207 ZBTB22O15209 634 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 EGFRP00533 1210 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 POTEIP0CG38 1075 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 POTEJP0CG39 1038 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 MCAMP43121 646 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 ZNF280AP59817 542 aaPredicted RBP20.65■□□□□ 0.9
RER1-208ENST00000493207 SCARF1Q14162 830 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
RER1-208ENST00000493207 RBM26Q5T8P6 1007 aaKnown RBP20.65■□□□□ 0.9
RER1-208ENST00000493207 PI16Q6UXB8 463 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 USP50Q70EL3 339 aaPredicted RBP20.65■□□□□ 0.9
RER1-208ENST00000493207 OGFOD1Q8N543 542 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 HMG20BQ9P0W2 317 aa20.65■□□□□ 0.9
RER1-208ENST00000493207 PDS5AQ29RF7 1337 aaKnown RBP20.64■□□□□ 0.89
RER1-208ENST00000493207 NEFLP07196 543 aa20.64■□□□□ 0.89
RER1-208ENST00000493207 GRIK5Q16478 980 aa20.64■□□□□ 0.89
RER1-208ENST00000493207 SPATA5Q8NB90 893 aa20.64■□□□□ 0.89
RER1-208ENST00000493207 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.89
RER1-208ENST00000493207 HDAC9Q9UKV0 1011 aa20.64■□□□□ 0.89
RER1-208ENST00000493207 KIF4BQ2VIQ3 1234 aa20.63■□□□□ 0.89
RER1-208ENST00000493207 ANKRD45Q5TZF3 282 aa20.63■□□□□ 0.89
RER1-208ENST00000493207 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
RER1-208ENST00000493207 TTF2Q9UNY4 1162 aaKnown RBP20.63■□□□□ 0.89
RER1-208ENST00000493207 CLEC11AQ9Y240 323 aa20.63■□□□□ 0.89
RER1-208ENST00000493207 SALL1Q9NSC2 1324 aa20.62■□□□□ 0.89
RER1-208ENST00000493207 TOMM70O94826 608 aa20.62■□□□□ 0.89
RER1-208ENST00000493207 HIRAP54198 1017 aaPredicted RBP20.62■□□□□ 0.89
RER1-208ENST00000493207 ZNF512BQ96KM6 892 aaPredicted RBP20.62■□□□□ 0.89
RER1-208ENST00000493207 SNRKQ9NRH2 765 aa20.62■□□□□ 0.89
RER1-208ENST00000493207 MMP14P50281 582 aa20.61■□□□□ 0.89
RER1-208ENST00000493207 B4GALNT3Q6L9W6 998 aa20.61■□□□□ 0.89
RER1-208ENST00000493207 LDHDQ86WU2 507 aa20.61■□□□□ 0.89
RER1-208ENST00000493207 SMC5Q8IY18 1101 aa20.61■□□□□ 0.89
RER1-208ENST00000493207 ZGPATQ8N5A5 531 aaKnown RBP20.61■□□□□ 0.89
RER1-208ENST00000493207 LDHBP07195 334 aaKnown RBP20.6■□□□□ 0.89
RER1-208ENST00000493207 PRDX5P30044 214 aa20.6■□□□□ 0.89
RER1-208ENST00000493207 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
RER1-208ENST00000493207 ABCF2Q9UG63 623 aa20.6■□□□□ 0.89
RER1-208ENST00000493207 SUGT1Q9Y2Z0 365 aa20.6■□□□□ 0.89
RER1-208ENST00000493207 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
RER1-208ENST00000493207 ECM29Q5VYK3 1845 aa20.6■□□□□ 0.89
RER1-208ENST00000493207 ZAP70P43403 619 aa20.59■□□□□ 0.89
RER1-208ENST00000493207 RBM5P52756 815 aaKnown RBP eCLIP20.59■□□□□ 0.89
RER1-208ENST00000493207 TBC1D9Q6ZT07 1266 aa20.59■□□□□ 0.89
RER1-208ENST00000493207 NDUFB9Q9Y6M9 179 aa20.59■□□□□ 0.89
RER1-208ENST00000493207 MAST3O60307 1309 aa20.58■□□□□ 0.89
RER1-208ENST00000493207 DLGAP5Q15398 846 aa20.58■□□□□ 0.89
RER1-208ENST00000493207 CFAP100Q494V2 611 aa20.58■□□□□ 0.89
RER1-208ENST00000493207 CHADLQ6NUI6 762 aa20.58■□□□□ 0.89
RER1-208ENST00000493207 SMC1BQ8NDV3 1235 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms