RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 FRAT1Q92837 279 aaPredicted RBP18.45■□□□□ 0.54
SS18L1-205ENST00000492466 FBXW7Q969H0 707 aa18.45■□□□□ 0.54
SS18L1-205ENST00000492466 NOB1Q9ULX3 412 aaKnown RBP18.45■□□□□ 0.54
SS18L1-205ENST00000492466 CCDC85CA6NKD9 419 aa18.44■□□□□ 0.54
SS18L1-205ENST00000492466 UBE2Q2LH0YL09 131 aa18.44■□□□□ 0.54
SS18L1-205ENST00000492466 RGS19P49795 217 aa18.44■□□□□ 0.54
SS18L1-205ENST00000492466 IPO8O15397 1037 aaKnown RBP18.43■□□□□ 0.54
SS18L1-205ENST00000492466 IL1R1P14778 569 aa18.43■□□□□ 0.54
SS18L1-205ENST00000492466 DGKZQ13574 1117 aa18.43■□□□□ 0.54
SS18L1-205ENST00000492466 KAZALD1Q96I82 304 aa18.43■□□□□ 0.54
SS18L1-205ENST00000492466 ZNF594Q96JF6 807 aaPredicted RBP18.43■□□□□ 0.54
SS18L1-205ENST00000492466 AKAP11Q9UKA4 1901 aa18.43■□□□□ 0.54
SS18L1-205ENST00000492466 KCNJ4P48050 445 aa18.42■□□□□ 0.54
SS18L1-205ENST00000492466 TAF7LQ5H9L4 462 aa18.42■□□□□ 0.54
SS18L1-205ENST00000492466 REM2Q8IYK8 340 aaPredicted RBP18.41■□□□□ 0.54
SS18L1-205ENST00000492466 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
SS18L1-205ENST00000492466 PCDHAC2Q9Y5I4 1007 aa18.41■□□□□ 0.54
SS18L1-205ENST00000492466 MTMR14Q8NCE2 650 aa18.4■□□□□ 0.54
SS18L1-205ENST00000492466 HDAC9Q9UKV0 1011 aa18.4■□□□□ 0.54
SS18L1-205ENST00000492466 HTTP42858 3142 aa18.4■□□□□ 0.54
SS18L1-205ENST00000492466 BCAR3O75815 825 aa18.39■□□□□ 0.53
SS18L1-205ENST00000492466 NBPF7P0C2Y1 421 aaPredicted RBP18.39■□□□□ 0.53
SS18L1-205ENST00000492466 CCDC57Q2TAC2 916 aa18.39■□□□□ 0.53
SS18L1-205ENST00000492466 LDHAL6AQ6ZMR3 332 aa18.39■□□□□ 0.53
SS18L1-205ENST00000492466 SUCLG2Q96I99 432 aa18.39■□□□□ 0.53
SS18L1-205ENST00000492466 UTYO14607 1347 aa18.39■□□□□ 0.53
SS18L1-205ENST00000492466 AOX1Q06278 1338 aa18.39■□□□□ 0.53
SS18L1-205ENST00000492466 TM4SF4P48230 202 aa18.38■□□□□ 0.53
SS18L1-205ENST00000492466 FKBP1AP62942 108 aaKnown RBP18.38■□□□□ 0.53
SS18L1-205ENST00000492466 PTPN12Q05209 780 aaKnown RBP18.38■□□□□ 0.53
SS18L1-205ENST00000492466 LDLRAD1Q5T700 205 aa18.38■□□□□ 0.53
SS18L1-205ENST00000492466 APOBEC3FQ8IUX4 373 aaKnown RBP18.38■□□□□ 0.53
SS18L1-205ENST00000492466 FTSJ3Q8IY81 847 aaKnown RBP18.38■□□□□ 0.53
SS18L1-205ENST00000492466 CENPFP49454 3210 aa18.38■□□□□ 0.53
SS18L1-205ENST00000492466 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
SS18L1-205ENST00000492466 DLGAP5Q15398 846 aa18.37■□□□□ 0.53
SS18L1-205ENST00000492466 ZNF804AQ7Z570 1209 aa18.37■□□□□ 0.53
SS18L1-205ENST00000492466 PRMT6Q96LA8 375 aaPredicted RBP18.37■□□□□ 0.53
SS18L1-205ENST00000492466 PUS3Q9BZE2 481 aaKnown RBP18.37■□□□□ 0.53
SS18L1-205ENST00000492466 DEFB129Q9H1M3 183 aa18.37■□□□□ 0.53
SS18L1-205ENST00000492466 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
SS18L1-205ENST00000492466 JAG2Q9Y219 1238 aa18.37■□□□□ 0.53
SS18L1-205ENST00000492466 SSC5DA1L4H1 1573 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 PLIN1O60240 522 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 NF2P35240 595 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 TTLL12Q14166 644 aaPredicted RBP18.36■□□□□ 0.53
SS18L1-205ENST00000492466 ZKSCAN2Q63HK3 967 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 ATF7IPQ6VMQ6 1270 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 TDRD7Q8NHU6 1098 aaKnown RBP18.36■□□□□ 0.53
SS18L1-205ENST00000492466 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 CNNM1Q9NRU3 951 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 RIPOR2Q9Y4F9 1068 aa18.36■□□□□ 0.53
SS18L1-205ENST00000492466 FAM205AQ6ZU69 1335 aa18.35■□□□□ 0.53
SS18L1-205ENST00000492466 SPDYE2BA6NHP3 402 aa18.35■□□□□ 0.53
SS18L1-205ENST00000492466 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
SS18L1-205ENST00000492466 SPDYE6P0CI01 402 aa18.35■□□□□ 0.53
SS18L1-205ENST00000492466 PRKG1Q13976 671 aa18.35■□□□□ 0.53
SS18L1-205ENST00000492466 UBE4AQ14139 1066 aa18.35■□□□□ 0.53
SS18L1-205ENST00000492466 RABL6Q3YEC7 729 aaPredicted RBP18.35■□□□□ 0.53
SS18L1-205ENST00000492466 CFAP100Q494V2 611 aa18.35■□□□□ 0.53
SS18L1-205ENST00000492466 FAM84BQ96KN1 310 aaPredicted RBP18.35■□□□□ 0.53
SS18L1-205ENST00000492466 BICC1Q9H694 974 aaKnown RBP18.35■□□□□ 0.53
SS18L1-205ENST00000492466 ECM29Q5VYK3 1845 aa18.35■□□□□ 0.53
SS18L1-205ENST00000492466 COL1A1P02452 1464 aaPredicted RBP18.34■□□□□ 0.53
SS18L1-205ENST00000492466 TRIM27P14373 513 aa18.34■□□□□ 0.53
SS18L1-205ENST00000492466 MLLT1Q03111 559 aaPredicted RBP18.34■□□□□ 0.53
SS18L1-205ENST00000492466 MAP3K11Q16584 847 aa18.34■□□□□ 0.53
SS18L1-205ENST00000492466 ARMC9Q7Z3E5 817 aa18.34■□□□□ 0.53
SS18L1-205ENST00000492466 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
SS18L1-205ENST00000492466 HDAC5Q9UQL6 1122 aa18.34■□□□□ 0.53
SS18L1-205ENST00000492466 TBC1D8O95759 1140 aa18.33■□□□□ 0.52
SS18L1-205ENST00000492466 GYG1P46976 350 aa18.33■□□□□ 0.52
SS18L1-205ENST00000492466 MKRN3Q13064 507 aaKnown RBP18.33■□□□□ 0.52
SS18L1-205ENST00000492466 ANGEL1Q9UNK9 670 aaKnown RBP18.33■□□□□ 0.52
SS18L1-205ENST00000492466 BRCA2P51587 3418 aa18.32■□□□□ 0.52
SS18L1-205ENST00000492466 MKI67P46013 3256 aaKnown RBP18.32■□□□□ 0.52
SS18L1-205ENST00000492466 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
SS18L1-205ENST00000492466 SPRYD7Q5W111 196 aa18.32■□□□□ 0.52
SS18L1-205ENST00000492466 CTU1Q7Z7A3 348 aaKnown RBP18.32■□□□□ 0.52
SS18L1-205ENST00000492466 ZNF296Q8WUU4 475 aaPredicted RBP18.32■□□□□ 0.52
SS18L1-205ENST00000492466 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
SS18L1-205ENST00000492466 PPP2R3BQ9Y5P8 575 aa18.32■□□□□ 0.52
SS18L1-205ENST00000492466 HIBADHP31937 336 aaKnown RBP18.31■□□□□ 0.52
SS18L1-205ENST00000492466 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
SS18L1-205ENST00000492466 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
SS18L1-205ENST00000492466 VGLL2Q8N8G2 317 aa18.31■□□□□ 0.52
SS18L1-205ENST00000492466 CFHR5Q9BXR6 569 aa18.31■□□□□ 0.52
SS18L1-205ENST00000492466 R3HDMLQ9H3Y0 253 aa18.31■□□□□ 0.52
SS18L1-205ENST00000492466 GNAI3P08754 354 aa18.3■□□□□ 0.52
SS18L1-205ENST00000492466 GRIK5Q16478 980 aa18.3■□□□□ 0.52
SS18L1-205ENST00000492466 NBPF12Q5TAG4 269 aaPredicted RBP18.3■□□□□ 0.52
SS18L1-205ENST00000492466 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
SS18L1-205ENST00000492466 CLMNQ96JQ2 1002 aa18.3■□□□□ 0.52
SS18L1-205ENST00000492466 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
SS18L1-205ENST00000492466 MROH5Q6ZUA9 1318 aa18.29■□□□□ 0.52
SS18L1-205ENST00000492466 GPR25O00155 361 aa18.29■□□□□ 0.52
SS18L1-205ENST00000492466 MFSD14BQ5SR56 506 aa18.29■□□□□ 0.52
SS18L1-205ENST00000492466 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
SS18L1-205ENST00000492466 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms