RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 CYP4F12Q9HCS2 524 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 LRFN2Q9ULH4 789 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 ZMIZ1Q9ULJ6 1067 aa5.57□□□□□ -1.52
HMGB1P30-201ENST00000492455 MEGF11A6BM72 1044 aa5.56□□□□□ -1.52
HMGB1P30-201ENST00000492455 FAM196BA6NMK8 535 aa5.56□□□□□ -1.52
HMGB1P30-201ENST00000492455 ATG7O95352 703 aa5.56□□□□□ -1.52
HMGB1P30-201ENST00000492455 BRD2P25440 801 aaKnown RBP5.56□□□□□ -1.52
HMGB1P30-201ENST00000492455 TBC1D32Q96NH3 1257 aa5.56□□□□□ -1.52
HMGB1P30-201ENST00000492455 SLC38A3Q99624 504 aa5.56□□□□□ -1.52
HMGB1P30-201ENST00000492455 ADAM19Q9H013 955 aa5.56□□□□□ -1.52
HMGB1P30-201ENST00000492455 CARNS1A5YM72 827 aa5.55□□□□□ -1.52
HMGB1P30-201ENST00000492455 TMEM88BA6NKF7 163 aa5.55□□□□□ -1.52
HMGB1P30-201ENST00000492455 DUSP27Q5VZP5 1158 aa5.55□□□□□ -1.52
HMGB1P30-201ENST00000492455 SPOCD1Q6ZMY3 1216 aa5.55□□□□□ -1.52
HMGB1P30-201ENST00000492455 COL26A1Q96A83 441 aa5.55□□□□□ -1.52
HMGB1P30-201ENST00000492455 PAK6Q9NQU5 681 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P30-201ENST00000492455 KIF4AO95239 1232 aa5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 PAPLNO95428 1278 aa5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 CYP27A1Q02318 531 aa5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 C19orf57Q0VDD7 668 aa5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 PLCL1Q15111 1095 aa5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 COX20Q5RI15 118 aa5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 POP1Q99575 1024 aaKnown RBP5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 VRTNQ9H8Y1 702 aa5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 ABI2Q9NYB9 513 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P30-201ENST00000492455 ELOAQ14241 798 aaKnown RBP5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 NFXL1Q6ZNB6 911 aa5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 ZAR1Q86SH2 424 aa5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 ETFBKMTQ8IXQ9 262 aa5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 STK32AQ8WU08 396 aa5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 LRRC4CQ9HCJ2 640 aa5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 SLAIN2Q9P270 581 aa5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 SLC5A6Q9Y289 635 aa5.53□□□□□ -1.52
HMGB1P30-201ENST00000492455 FAM69CQ0P6D2 419 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 COL19A1Q14993 1142 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 STK11IPQ8N1F8 1099 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 CEP120Q8N960 986 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 SMG8Q8ND04 991 aaKnown RBP5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 FAM200AQ8TCP9 573 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 FBLIM1Q8WUP2 373 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 USP26Q9BXU7 913 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 SUGCTQ9HAC7 445 aa5.52□□□□□ -1.53
HMGB1P30-201ENST00000492455 TMEM164Q5U3C3 297 aa5.51□□□□□ -1.53
HMGB1P30-201ENST00000492455 C16orf46Q6P387 395 aa5.51□□□□□ -1.53
HMGB1P30-201ENST00000492455 ADAMTSL4Q6UY14 1074 aa5.51□□□□□ -1.53
HMGB1P30-201ENST00000492455 TRAIPQ9BWF2 469 aa5.51□□□□□ -1.53
HMGB1P30-201ENST00000492455 TMPRSS13Q9BYE2 586 aa5.51□□□□□ -1.53
HMGB1P30-201ENST00000492455 KRTAP4-5Q9BYR2 181 aa5.51□□□□□ -1.53
HMGB1P30-201ENST00000492455 NOVA2Q9UNW9 492 aaKnown RBP5.51□□□□□ -1.53
HMGB1P30-201ENST00000492455 TIAF1O95411 115 aa5.5□□□□□ -1.53
HMGB1P30-201ENST00000492455 ZNF792Q3KQV3 632 aa5.5□□□□□ -1.53
HMGB1P30-201ENST00000492455 CCER1Q8TC90 406 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P30-201ENST00000492455 PRKAG2Q9UGJ0 569 aa5.5□□□□□ -1.53
HMGB1P30-201ENST00000492455 USTQ9Y2C2 406 aa5.5□□□□□ -1.53
HMGB1P30-201ENST00000492455 FAM170BA6NMN3 283 aa5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 PDE2AO00408 941 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 CYP2E1P05181 493 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 ZAP70P43403 619 aa5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 FKBP5Q13451 457 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 IKBKEQ14164 716 aa5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 MAP7Q14244 749 aa5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 ATG4DQ86TL0 474 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 TMEM40Q8WWA1 233 aa5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 FAM168AQ92567 244 aa5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 ZC3H7BQ9UGR2 993 aaKnown RBP5.49□□□□□ -1.53
HMGB1P30-201ENST00000492455 ACIN1Q9UKV3 1341 aaKnown RBP5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 ADMP35318 185 aa5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 EXOSC6Q5RKV6 272 aaKnown RBP5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 PDE12Q6L8Q7 609 aaKnown RBP5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 CDPF1Q6NVV7 123 aa5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 ZNF438Q7Z4V0 828 aa5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 SHISA5Q8N114 240 aa5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 GPR152Q8TDT2 470 aa5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 KANSL3Q9P2N6 904 aa5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P30-201ENST00000492455 LOC100289279A0A1B0GTE1 492 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 DRD2P14416 443 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 CES1P23141 567 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 PHLDB3Q6NSJ2 640 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 BCL7CQ8WUZ0 217 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 EZH1Q92800 747 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 MISP3Q96FF7 219 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 TOX2Q96NM4 488 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 ELP3Q9H9T3 547 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 RC3H2Q9HBD1 1191 aaKnown RBP5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 CARMIL2Q6F5E8 1435 aa5.47□□□□□ -1.53
HMGB1P30-201ENST00000492455 PDIA4P13667 645 aaKnown RBP5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 SOX4Q06945 474 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 ZNF765Q7L2R6 523 aa5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 ABTB2Q8N961 1025 aa5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 C2CD4AQ8NCU7 369 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 TTC16Q8NEE8 873 aa5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 ZSCAN18Q8TBC5 510 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 BSNDQ8WZ55 320 aa5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 FAM84AQ96KN4 292 aa5.46□□□□□ -1.54
HMGB1P30-201ENST00000492455 SAP130Q9H0E3 1048 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms