RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
EPHB4-208ENST00000492403 ZC3H4Q9UPT8 1303 aaKnown RBP12.93□□□□□ -0.34
EPHB4-208ENST00000492403 KCNQ3O43525 872 aa12.93□□□□□ -0.34
EPHB4-208ENST00000492403 ZNF16P17020 682 aaPredicted RBP12.93□□□□□ -0.34
EPHB4-208ENST00000492403 SERPINB4P48594 390 aa12.93□□□□□ -0.34
EPHB4-208ENST00000492403 RASSF7Q02833 373 aa12.93□□□□□ -0.34
EPHB4-208ENST00000492403 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
EPHB4-208ENST00000492403 CLEC4GQ6UXB4 293 aa12.93□□□□□ -0.34
EPHB4-208ENST00000492403 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
EPHB4-208ENST00000492403 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
EPHB4-208ENST00000492403 FAM177BA6PVY3 158 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 C21orf2O43822 256 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 CAMTA2O94983 1202 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 ATP2B4P23634 1241 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 PIP4K2AP48426 406 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-208ENST00000492403 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
EPHB4-208ENST00000492403 NCOA4Q13772 614 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 MORN1Q5T089 497 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 PRR5LQ6MZQ0 368 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 KIF6Q6ZMV9 814 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 SAMD7Q7Z3H4 446 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-208ENST00000492403 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
EPHB4-208ENST00000492403 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
EPHB4-208ENST00000492403 FSTL1Q12841 308 aa12.91□□□□□ -0.34
EPHB4-208ENST00000492403 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
EPHB4-208ENST00000492403 MASTLQ96GX5 879 aa12.91□□□□□ -0.34
EPHB4-208ENST00000492403 NIP7Q9Y221 180 aaKnown RBP eCLIP12.91□□□□□ -0.34
EPHB4-208ENST00000492403 SLC27A5Q9Y2P5 690 aa12.91□□□□□ -0.34
EPHB4-208ENST00000492403 DLEC1Q9Y238 1755 aa12.91□□□□□ -0.34
EPHB4-208ENST00000492403 VEGFAP15692 232 aaPredicted RBP12.9□□□□□ -0.34
EPHB4-208ENST00000492403 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
EPHB4-208ENST00000492403 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
EPHB4-208ENST00000492403 ERFEQ4G0M1 354 aa12.9□□□□□ -0.34
EPHB4-208ENST00000492403 STYK1Q6J9G0 422 aa12.9□□□□□ -0.34
EPHB4-208ENST00000492403 ANKMY2Q8IV38 441 aa12.9□□□□□ -0.34
EPHB4-208ENST00000492403 SMC1BQ8NDV3 1235 aa12.9□□□□□ -0.34
EPHB4-208ENST00000492403 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
EPHB4-208ENST00000492403 TMX4Q9H1E5 349 aaPredicted RBP12.9□□□□□ -0.34
EPHB4-208ENST00000492403 MIS18AQ9NYP9 233 aa12.9□□□□□ -0.34
EPHB4-208ENST00000492403 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
EPHB4-208ENST00000492403 TNRC6CQ9HCJ0 1690 aaKnown RBP12.89□□□□□ -0.35
EPHB4-208ENST00000492403 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
EPHB4-208ENST00000492403 TCERG1O14776 1098 aaKnown RBP12.89□□□□□ -0.35
EPHB4-208ENST00000492403 PUS10Q3MIT2 529 aaKnown RBP12.89□□□□□ -0.35
EPHB4-208ENST00000492403 EXOC6Q8TAG9 804 aa12.89□□□□□ -0.35
EPHB4-208ENST00000492403 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
EPHB4-208ENST00000492403 TAOK3Q9H2K8 898 aa12.89□□□□□ -0.35
EPHB4-208ENST00000492403 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
EPHB4-208ENST00000492403 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
EPHB4-208ENST00000492403 MYL6BP14649 208 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 RIPK4P57078 832 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
EPHB4-208ENST00000492403 RNF135Q8IUD6 432 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 ZNF592Q92610 1267 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 SBF1O95248 1867 aa12.88□□□□□ -0.35
EPHB4-208ENST00000492403 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
EPHB4-208ENST00000492403 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
EPHB4-208ENST00000492403 BCORQ6W2J9 1755 aa12.87□□□□□ -0.35
EPHB4-208ENST00000492403 NPR1P16066 1061 aa12.87□□□□□ -0.35
EPHB4-208ENST00000492403 PSEN2P49810 448 aa12.87□□□□□ -0.35
EPHB4-208ENST00000492403 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
EPHB4-208ENST00000492403 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
EPHB4-208ENST00000492403 PLEKHF1Q96S99 279 aa12.87□□□□□ -0.35
EPHB4-208ENST00000492403 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
EPHB4-208ENST00000492403 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
EPHB4-208ENST00000492403 LZTS3O60299 673 aaPredicted RBP12.86□□□□□ -0.35
EPHB4-208ENST00000492403 SRGNP10124 158 aa12.86□□□□□ -0.35
EPHB4-208ENST00000492403 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
EPHB4-208ENST00000492403 PLPP7Q8NBV4 271 aa12.86□□□□□ -0.35
EPHB4-208ENST00000492403 RPGRQ92834 1020 aaKnown RBP12.86□□□□□ -0.35
EPHB4-208ENST00000492403 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
EPHB4-208ENST00000492403 TIAM2Q8IVF5 1701 aa12.85□□□□□ -0.35
EPHB4-208ENST00000492403 LAMB4A4D0S4 1761 aa12.85□□□□□ -0.35
EPHB4-208ENST00000492403 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
EPHB4-208ENST00000492403 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
EPHB4-208ENST00000492403 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
EPHB4-208ENST00000492403 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
EPHB4-208ENST00000492403 DPYDQ12882 1025 aa12.85□□□□□ -0.35
EPHB4-208ENST00000492403 SWI5Q1ZZU3 235 aa12.85□□□□□ -0.35
EPHB4-208ENST00000492403 RTKN2Q8IZC4 609 aa12.85□□□□□ -0.35
EPHB4-208ENST00000492403 MAP10Q9P2G4 905 aa12.85□□□□□ -0.35
EPHB4-208ENST00000492403 RBM19Q9Y4C8 960 aaKnown RBP12.85□□□□□ -0.35
EPHB4-208ENST00000492403 LAS1LQ9Y4W2 734 aaKnown RBP12.85□□□□□ -0.35
EPHB4-208ENST00000492403 ANKRD31Q8N7Z5 1873 aa12.85□□□□□ -0.35
EPHB4-208ENST00000492403 ERVV-1B6SEH8 477 aa12.84□□□□□ -0.35
EPHB4-208ENST00000492403 NFKBIEO00221 500 aa12.84□□□□□ -0.35
EPHB4-208ENST00000492403 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
EPHB4-208ENST00000492403 GNAI1P63096 354 aa12.84□□□□□ -0.35
EPHB4-208ENST00000492403 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
EPHB4-208ENST00000492403 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
EPHB4-208ENST00000492403 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
EPHB4-208ENST00000492403 USB1Q9BQ65 265 aaKnown RBP12.84□□□□□ -0.35
EPHB4-208ENST00000492403 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
EPHB4-208ENST00000492403 ANKRD33BA6NCL7 494 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 ACTN4O43707 911 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms