RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 FGFR2P21802 821 aa30.78■■■□□ 2.52
UPF3A-209ENST00000492270 FBXO33Q7Z6M2 555 aa30.78■■■□□ 2.52
UPF3A-209ENST00000492270 TLL2Q9Y6L7 1015 aa30.78■■■□□ 2.52
UPF3A-209ENST00000492270 FAM205AQ6ZU69 1335 aa30.77■■■□□ 2.52
UPF3A-209ENST00000492270 F8W031 263 aaPredicted RBP30.77■■■□□ 2.52
UPF3A-209ENST00000492270 WNT10BO00744 389 aa30.77■■■□□ 2.52
UPF3A-209ENST00000492270 RLBP1P12271 317 aa30.77■■■□□ 2.52
UPF3A-209ENST00000492270 PUM3Q15397 648 aaKnown RBP30.77■■■□□ 2.52
UPF3A-209ENST00000492270 SULF1Q8IWU6 871 aa30.77■■■□□ 2.52
UPF3A-209ENST00000492270 THSD7BQ9C0I4 1608 aa30.76■■■□□ 2.52
UPF3A-209ENST00000492270 CIAO1O76071 339 aa30.76■■■□□ 2.51
UPF3A-209ENST00000492270 COPRSQ9NQ92 184 aa30.76■■■□□ 2.51
UPF3A-209ENST00000492270 HDAC9Q9UKV0 1011 aa30.76■■■□□ 2.51
UPF3A-209ENST00000492270 SRGAP3O43295 1099 aa30.75■■■□□ 2.51
UPF3A-209ENST00000492270 FKBP1AP62942 108 aaKnown RBP30.75■■■□□ 2.51
UPF3A-209ENST00000492270 MTX1Q13505 466 aa30.75■■■□□ 2.51
UPF3A-209ENST00000492270 VPS37DQ86XT2 251 aa30.75■■■□□ 2.51
UPF3A-209ENST00000492270 FTSJ3Q8IY81 847 aaKnown RBP30.75■■■□□ 2.51
UPF3A-209ENST00000492270 DZIP1LQ8IYY4 767 aaKnown RBP30.75■■■□□ 2.51
UPF3A-209ENST00000492270 FBXO3Q9UK99 471 aa30.75■■■□□ 2.51
UPF3A-209ENST00000492270 PITPNM2Q9BZ72 1349 aa30.74■■■□□ 2.51
UPF3A-209ENST00000492270 GNAI2P04899 355 aa30.74■■■□□ 2.51
UPF3A-209ENST00000492270 BCAMP50895 628 aa30.74■■■□□ 2.51
UPF3A-209ENST00000492270 CAVIN4Q5BKX8 364 aa30.74■■■□□ 2.51
UPF3A-209ENST00000492270 SAPCD2Q86UD0 394 aa30.74■■■□□ 2.51
UPF3A-209ENST00000492270 ZBED3Q96IU2 234 aaPredicted RBP30.74■■■□□ 2.51
UPF3A-209ENST00000492270 PCDHAC2Q9Y5I4 1007 aa30.74■■■□□ 2.51
UPF3A-209ENST00000492270 IFIT1P09914 478 aaKnown RBP30.73■■■□□ 2.51
UPF3A-209ENST00000492270 MFSD14BQ5SR56 506 aa30.73■■■□□ 2.51
UPF3A-209ENST00000492270 PAXIP1Q6ZW49 1069 aaPredicted RBP30.73■■■□□ 2.51
UPF3A-209ENST00000492270 CDCA5Q96FF9 252 aa30.73■■■□□ 2.51
UPF3A-209ENST00000492270 MMP14P50281 582 aa30.72■■■□□ 2.51
UPF3A-209ENST00000492270 CYP4F22Q6NT55 531 aa30.72■■■□□ 2.51
UPF3A-209ENST00000492270 WDR33Q9C0J8 1336 aaKnown RBP30.72■■■□□ 2.51
UPF3A-209ENST00000492270 HSPA1AP0DMV8 641 aaKnown RBP30.71■■■□□ 2.51
UPF3A-209ENST00000492270 HSPA1BP0DMV9 641 aaKnown RBP30.71■■■□□ 2.51
UPF3A-209ENST00000492270 SLC5A1P13866 664 aa30.71■■■□□ 2.51
UPF3A-209ENST00000492270 IL15P40933 162 aaPredicted RBP30.71■■■□□ 2.51
UPF3A-209ENST00000492270 CHAF1AQ13111 956 aaPredicted RBP30.71■■■□□ 2.51
UPF3A-209ENST00000492270 GRM1Q13255 1194 aa30.71■■■□□ 2.51
UPF3A-209ENST00000492270 ITPRIPQ8IWB1 547 aa30.71■■■□□ 2.51
UPF3A-209ENST00000492270 LPIN2Q92539 896 aa30.71■■■□□ 2.51
UPF3A-209ENST00000492270 CEP126Q9P2H0 1117 aa30.71■■■□□ 2.51
UPF3A-209ENST00000492270 PNMA6EA0A0J9YXQ4 647 aa30.7■■■□□ 2.51
UPF3A-209ENST00000492270 ATP2B3Q16720 1220 aa30.7■■■□□ 2.51
UPF3A-209ENST00000492270 CAPNS2Q96L46 248 aa30.7■■■□□ 2.51
UPF3A-209ENST00000492270 C1orf115Q9H7X2 142 aa30.69■■■□□ 2.5
UPF3A-209ENST00000492270 GBA2Q9HCG7 927 aaPredicted RBP30.69■■■□□ 2.5
UPF3A-209ENST00000492270 FRAT2O75474 233 aaPredicted RBP30.68■■■□□ 2.5
UPF3A-209ENST00000492270 DLGAP5Q15398 846 aa30.68■■■□□ 2.5
UPF3A-209ENST00000492270 GRIK5Q16478 980 aa30.68■■■□□ 2.5
UPF3A-209ENST00000492270 CFAP100Q494V2 611 aa30.68■■■□□ 2.5
UPF3A-209ENST00000492270 PRAMEF18Q5VWM3 479 aa30.68■■■□□ 2.5
UPF3A-209ENST00000492270 PANK1Q8TE04 598 aa30.68■■■□□ 2.5
UPF3A-209ENST00000492270 COL1A1P02452 1464 aaPredicted RBP30.68■■■□□ 2.5
UPF3A-209ENST00000492270 AOX1Q06278 1338 aa30.68■■■□□ 2.5
UPF3A-209ENST00000492270 PAPPA2Q9BXP8 1791 aa30.66■■■□□ 2.5
UPF3A-209ENST00000492270 HUNKP57058 714 aa30.66■■■□□ 2.5
UPF3A-209ENST00000492270 MTMR14Q8NCE2 650 aa30.66■■■□□ 2.5
UPF3A-209ENST00000492270 TTF2Q9UNY4 1162 aaKnown RBP30.66■■■□□ 2.5
UPF3A-209ENST00000492270 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.65■■■□□ 2.5
UPF3A-209ENST00000492270 SPDYE2BA6NHP3 402 aa30.64■■■□□ 2.5
UPF3A-209ENST00000492270 ZBTB7BO15156 539 aaPredicted RBP30.64■■■□□ 2.5
UPF3A-209ENST00000492270 SPDYE6P0CI01 402 aa30.64■■■□□ 2.5
UPF3A-209ENST00000492270 ECE1P42892 770 aa30.64■■■□□ 2.5
UPF3A-209ENST00000492270 C2orf69Q8N8R5 385 aa30.64■■■□□ 2.5
UPF3A-209ENST00000492270 HHIPL1Q96JK4 782 aa30.64■■■□□ 2.5
UPF3A-209ENST00000492270 PRMT6Q96LA8 375 aaPredicted RBP30.64■■■□□ 2.5
UPF3A-209ENST00000492270 AOC2O75106 756 aa30.63■■■□□ 2.49
UPF3A-209ENST00000492270 ADORA1P30542 326 aa30.63■■■□□ 2.49
UPF3A-209ENST00000492270 RBM5P52756 815 aaKnown RBP eCLIP30.63■■■□□ 2.49
UPF3A-209ENST00000492270 TFCP2Q12800 502 aa30.63■■■□□ 2.49
UPF3A-209ENST00000492270 RCAN3Q9UKA8 241 aa30.63■■■□□ 2.49
UPF3A-209ENST00000492270 APOBEC3FQ8IUX4 373 aaKnown RBP30.62■■■□□ 2.49
UPF3A-209ENST00000492270 CLRN2A0PK11 232 aa30.61■■■□□ 2.49
UPF3A-209ENST00000492270 TBC1D22AQ8WUA7 517 aa30.61■■■□□ 2.49
UPF3A-209ENST00000492270 PHKA1P46020 1223 aa30.6■■■□□ 2.49
UPF3A-209ENST00000492270 POLA2Q14181 598 aa30.6■■■□□ 2.49
UPF3A-209ENST00000492270 TIMM10P62072 90 aa30.59■■■□□ 2.49
UPF3A-209ENST00000492270 MOB2Q70IA6 237 aa30.59■■■□□ 2.49
UPF3A-209ENST00000492270 SERPINA10Q9UK55 444 aa30.59■■■□□ 2.49
UPF3A-209ENST00000492270 CRKP46108 304 aa30.58■■■□□ 2.49
UPF3A-209ENST00000492270 ATP8B2P98198 1209 aa30.58■■■□□ 2.49
UPF3A-209ENST00000492270 A0A1B0GUL7 405 aa30.57■■■□□ 2.48
UPF3A-209ENST00000492270 FOXN1O15353 648 aa30.57■■■□□ 2.48
UPF3A-209ENST00000492270 SSH3Q8TE77 659 aa30.57■■■□□ 2.48
UPF3A-209ENST00000492270 VEZTQ9HBM0 779 aa30.57■■■□□ 2.48
UPF3A-209ENST00000492270 WBP1LQ9NX94 342 aa30.57■■■□□ 2.48
UPF3A-209ENST00000492270 MYO1BO43795 1136 aa30.56■■■□□ 2.48
UPF3A-209ENST00000492270 G3BP1Q13283 466 aaKnown RBP eCLIP30.56■■■□□ 2.48
UPF3A-209ENST00000492270 CCDC102BQ68D86 513 aa30.56■■■□□ 2.48
UPF3A-209ENST00000492270 RGMBQ6NW40 437 aa30.56■■■□□ 2.48
UPF3A-209ENST00000492270 ZIC5Q96T25 663 aa30.55■■■□□ 2.48
UPF3A-209ENST00000492270 DEFB129Q9H1M3 183 aa30.55■■■□□ 2.48
UPF3A-209ENST00000492270 TDRD3Q9H7E2 651 aaKnown RBP30.55■■■□□ 2.48
UPF3A-209ENST00000492270 AKAP2Q9Y2D5 859 aa30.55■■■□□ 2.48
UPF3A-209ENST00000492270 SSC5DA1L4H1 1573 aa30.54■■■□□ 2.48
UPF3A-209ENST00000492270 WDR66Q8TBY9 1149 aa30.54■■■□□ 2.48
UPF3A-209ENST00000492270 XAGE2Q96GT9 111 aa30.54■■■□□ 2.48
UPF3A-209ENST00000492270 GNL3LQ9NVN8 582 aaKnown RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 480.6 ms