RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 DACT2Q5SW24 774 aa28.48■■■□□ 2.15
SCN5A-213ENST00000491944 RSBN1LQ6PCB5 846 aaPredicted RBP28.48■■■□□ 2.15
SCN5A-213ENST00000491944 MXD3Q9BW11 206 aa28.48■■■□□ 2.15
SCN5A-213ENST00000491944 ZBTB12Q9Y330 459 aaPredicted RBP28.48■■■□□ 2.15
SCN5A-213ENST00000491944 SEMA3EO15041 775 aa28.47■■■□□ 2.15
SCN5A-213ENST00000491944 UQCRFS1P1P0C7P4 283 aa28.47■■■□□ 2.15
SCN5A-213ENST00000491944 GMPSP49915 693 aaPredicted RBP28.47■■■□□ 2.15
SCN5A-213ENST00000491944 DENND2AQ9ULE3 1009 aa28.47■■■□□ 2.15
SCN5A-213ENST00000491944 FAM205AQ6ZU69 1335 aa28.46■■■□□ 2.15
SCN5A-213ENST00000491944 COL1A1P02452 1464 aaPredicted RBP28.46■■■□□ 2.15
SCN5A-213ENST00000491944 ARID4AP29374 1257 aaPredicted RBP28.46■■■□□ 2.15
SCN5A-213ENST00000491944 RASGRF1Q13972 1273 aa28.46■■■□□ 2.15
SCN5A-213ENST00000491944 ERICH6BQ5W0A0 696 aa28.46■■■□□ 2.15
SCN5A-213ENST00000491944 CCDC136Q96JN2 1154 aa28.46■■■□□ 2.15
SCN5A-213ENST00000491944 WDR90Q96KV7 1748 aa28.45■■■□□ 2.14
SCN5A-213ENST00000491944 RPS12P25398 132 aaKnown RBP28.44■■■□□ 2.14
SCN5A-213ENST00000491944 MFSD14BQ5SR56 506 aa28.44■■■□□ 2.14
SCN5A-213ENST00000491944 L3MBTL3Q96JM7 780 aaPredicted RBP28.44■■■□□ 2.14
SCN5A-213ENST00000491944 LNPKQ9C0E8 428 aa28.44■■■□□ 2.14
SCN5A-213ENST00000491944 LMOD1P29536 600 aaPredicted RBP28.43■■■□□ 2.14
SCN5A-213ENST00000491944 AGBL3Q8NEM8 1001 aa28.43■■■□□ 2.14
SCN5A-213ENST00000491944 MYO3BQ8WXR4 1341 aa28.43■■■□□ 2.14
SCN5A-213ENST00000491944 MCAMP43121 646 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 NUCB1Q02818 461 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 SCARF1Q14162 830 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 PI16Q6UXB8 463 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 C16orf71Q8IYS4 520 aaPredicted RBP28.42■■■□□ 2.14
SCN5A-213ENST00000491944 SPATA5Q8NB90 893 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 WDR66Q8TBY9 1149 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 TBC1D22AQ8WUA7 517 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 HMG20BQ9P0W2 317 aa28.42■■■□□ 2.14
SCN5A-213ENST00000491944 SCNN1DP51172 638 aa28.41■■■□□ 2.14
SCN5A-213ENST00000491944 CHD1LQ86WJ1 897 aa28.41■■■□□ 2.14
SCN5A-213ENST00000491944 CERS5Q8N5B7 392 aa28.41■■■□□ 2.14
SCN5A-213ENST00000491944 GPATCH3Q96I76 525 aa28.41■■■□□ 2.14
SCN5A-213ENST00000491944 ZNF512BQ96KM6 892 aaPredicted RBP28.41■■■□□ 2.14
SCN5A-213ENST00000491944 GPBP1L1Q9HC44 474 aaPredicted RBP28.41■■■□□ 2.14
SCN5A-213ENST00000491944 SNRKQ9NRH2 765 aa28.41■■■□□ 2.14
SCN5A-213ENST00000491944 AKAP11Q9UKA4 1901 aa28.41■■■□□ 2.14
SCN5A-213ENST00000491944 SCN4AP35499 1836 aa28.41■■■□□ 2.14
SCN5A-213ENST00000491944 ZBTB22O15209 634 aa28.4■■■□□ 2.14
SCN5A-213ENST00000491944 FKBP1AP62942 108 aaKnown RBP28.4■■■□□ 2.14
SCN5A-213ENST00000491944 DPF2Q92785 391 aa28.4■■■□□ 2.14
SCN5A-213ENST00000491944 RRAGCQ9HB90 399 aa28.4■■■□□ 2.14
SCN5A-213ENST00000491944 NMRK2Q9NPI5 230 aa28.4■■■□□ 2.14
SCN5A-213ENST00000491944 GPRC5DQ9NZD1 345 aa28.4■■■□□ 2.14
SCN5A-213ENST00000491944 PDS5AQ29RF7 1337 aaKnown RBP28.4■■■□□ 2.14
SCN5A-213ENST00000491944 KIAA0825Q8IV33 1275 aa28.39■■■□□ 2.14
SCN5A-213ENST00000491944 OTUD7AQ8TE49 926 aaPredicted RBP28.39■■■□□ 2.14
SCN5A-213ENST00000491944 GMLQ99445 158 aa28.39■■■□□ 2.14
SCN5A-213ENST00000491944 CNOT7Q9UIV1 285 aaKnown RBP28.39■■■□□ 2.14
SCN5A-213ENST00000491944 HACL1Q9UJ83 578 aa28.39■■■□□ 2.14
SCN5A-213ENST00000491944 IQCA1LA6NCM1 817 aa28.38■■■□□ 2.13
SCN5A-213ENST00000491944 F8W031 263 aaPredicted RBP28.38■■■□□ 2.13
SCN5A-213ENST00000491944 MICALL2Q8IY33 904 aa28.38■■■□□ 2.13
SCN5A-213ENST00000491944 ZNF784Q8NCA9 323 aaPredicted RBP28.38■■■□□ 2.13
SCN5A-213ENST00000491944 PPP4R2Q9NY27 417 aa28.38■■■□□ 2.13
SCN5A-213ENST00000491944 SHTN1A0MZ66 631 aa28.37■■■□□ 2.13
SCN5A-213ENST00000491944 EPS15P42566 896 aa28.37■■■□□ 2.13
SCN5A-213ENST00000491944 CENPQQ7L2Z9 268 aaPredicted RBP28.37■■■□□ 2.13
SCN5A-213ENST00000491944 ECHDC1Q9NTX5 307 aa28.37■■■□□ 2.13
SCN5A-213ENST00000491944 H7C1D1 291 aa28.37■■■□□ 2.13
SCN5A-213ENST00000491944 USP17L8P0C7I0 530 aa28.37■■■□□ 2.13
SCN5A-213ENST00000491944 VEGFAP15692 232 aaPredicted RBP28.37■■■□□ 2.13
SCN5A-213ENST00000491944 TSHZ3Q63HK5 1081 aa28.37■■■□□ 2.13
SCN5A-213ENST00000491944 POTECB2RU33 542 aa28.36■■■□□ 2.13
SCN5A-213ENST00000491944 ATP5JP18859 108 aa28.36■■■□□ 2.13
SCN5A-213ENST00000491944 MX1P20591 662 aa28.36■■■□□ 2.13
SCN5A-213ENST00000491944 ZAP70P43403 619 aa28.36■■■□□ 2.13
SCN5A-213ENST00000491944 ZGPATQ8N5A5 531 aaKnown RBP28.36■■■□□ 2.13
SCN5A-213ENST00000491944 ABCF2Q9UG63 623 aa28.36■■■□□ 2.13
SCN5A-213ENST00000491944 SALL1Q9NSC2 1324 aa28.35■■■□□ 2.13
SCN5A-213ENST00000491944 GRIK5Q16478 980 aa28.35■■■□□ 2.13
SCN5A-213ENST00000491944 OGFOD1Q8N543 542 aa28.35■■■□□ 2.13
SCN5A-213ENST00000491944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.35■■■□□ 2.13
SCN5A-213ENST00000491944 BOLA2Q9H3K6 86 aa28.35■■■□□ 2.13
SCN5A-213ENST00000491944 HDAC9Q9UKV0 1011 aa28.35■■■□□ 2.13
SCN5A-213ENST00000491944 NDUFB9Q9Y6M9 179 aa28.35■■■□□ 2.13
SCN5A-213ENST00000491944 EPHX2P34913 555 aa28.34■■■□□ 2.13
SCN5A-213ENST00000491944 TBC1D9Q6ZT07 1266 aa28.34■■■□□ 2.13
SCN5A-213ENST00000491944 DNAJC2Q99543 621 aaKnown RBP28.34■■■□□ 2.13
SCN5A-213ENST00000491944 TTF2Q9UNY4 1162 aaKnown RBP28.34■■■□□ 2.13
SCN5A-213ENST00000491944 TTC41PQ6P2S7 1318 aa28.33■■■□□ 2.13
SCN5A-213ENST00000491944 LDHBP07195 334 aaKnown RBP28.33■■■□□ 2.13
SCN5A-213ENST00000491944 PRDX5P30044 214 aa28.33■■■□□ 2.13
SCN5A-213ENST00000491944 TAF1DQ9H5J8 278 aaPredicted RBP28.33■■■□□ 2.13
SCN5A-213ENST00000491944 SUGT1Q9Y2Z0 365 aa28.33■■■□□ 2.13
SCN5A-213ENST00000491944 SALL3Q9BXA9 1300 aa28.32■■■□□ 2.12
SCN5A-213ENST00000491944 CYP2E1P05181 493 aaPredicted RBP28.32■■■□□ 2.12
SCN5A-213ENST00000491944 ZNF280AP59817 542 aaPredicted RBP28.32■■■□□ 2.12
SCN5A-213ENST00000491944 SPTY2D1Q68D10 685 aaPredicted RBP28.32■■■□□ 2.12
SCN5A-213ENST00000491944 ADARB2Q9NS39 739 aaKnown RBP28.32■■■□□ 2.12
SCN5A-213ENST00000491944 ERC2O15083 957 aa28.31■■■□□ 2.12
SCN5A-213ENST00000491944 RBM26Q5T8P6 1007 aaKnown RBP28.31■■■□□ 2.12
SCN5A-213ENST00000491944 SAMD7Q7Z3H4 446 aa28.31■■■□□ 2.12
SCN5A-213ENST00000491944 MYO5AQ9Y4I1 1855 aaKnown RBP28.31■■■□□ 2.12
SCN5A-213ENST00000491944 TBC1D10BQ4KMP7 808 aaPredicted RBP28.3■■■□□ 2.12
SCN5A-213ENST00000491944 ERICH6Q7L0X2 663 aa28.3■■■□□ 2.12
SCN5A-213ENST00000491944 HAUS7Q99871 368 aa28.3■■■□□ 2.12
SCN5A-213ENST00000491944 MYOZ2Q9NPC6 264 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms