RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TBC1D22AQ8WUA7 517 aa20.69■□□□□ 0.9
PDLIM2-217ENST00000491330 ARHGAP45Q92619 1136 aa20.69■□□□□ 0.9
PDLIM2-217ENST00000491330 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
PDLIM2-217ENST00000491330 F8W031 263 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-217ENST00000491330 SNAP23O00161 211 aa20.68■□□□□ 0.9
PDLIM2-217ENST00000491330 PDE8BO95263 885 aa20.68■□□□□ 0.9
PDLIM2-217ENST00000491330 FBXO3Q9UK99 471 aa20.68■□□□□ 0.9
PDLIM2-217ENST00000491330 RIPOR2Q9Y4F9 1068 aa20.68■□□□□ 0.9
PDLIM2-217ENST00000491330 ASTN2O75129 1339 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-217ENST00000491330 HSPA8P11142 646 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-217ENST00000491330 TNFAIP1Q13829 316 aa20.67■□□□□ 0.9
PDLIM2-217ENST00000491330 MFSD14BQ5SR56 506 aa20.67■□□□□ 0.9
PDLIM2-217ENST00000491330 KAZALD1Q96I82 304 aa20.67■□□□□ 0.9
PDLIM2-217ENST00000491330 PUS3Q9BZE2 481 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-217ENST00000491330 PPP2R3BQ9Y5P8 575 aa20.67■□□□□ 0.9
PDLIM2-217ENST00000491330 GNAI3P08754 354 aa20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 GYG1P46976 350 aa20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 PUM3Q15397 648 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 SUPT20HL1Q3ZLR7 823 aa20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 ANKRD44Q8N8A2 993 aa20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 MTMR14Q8NCE2 650 aa20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 TDRD7Q8NHU6 1098 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 FAM205AQ6ZU69 1335 aa20.66■□□□□ 0.9
PDLIM2-217ENST00000491330 PPP1R12BO60237 982 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 CAPN15O75808 1086 aa20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 SLC5A1P13866 664 aa20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 RARSP54136 660 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 CFAP100Q494V2 611 aa20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 DLK2Q6UY11 383 aa20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 FAM84BQ96KN1 310 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 CEP126Q9P2H0 1117 aa20.65■□□□□ 0.9
PDLIM2-217ENST00000491330 EYA2O00167 538 aa20.64■□□□□ 0.89
PDLIM2-217ENST00000491330 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM2-217ENST00000491330 GNL3LQ9NVN8 582 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-217ENST00000491330 SERPINA10Q9UK55 444 aa20.64■□□□□ 0.89
PDLIM2-217ENST00000491330 TTF2Q9UNY4 1162 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-217ENST00000491330 SCN9AQ15858 1988 aa20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 SPEF2Q9C093 1822 aa20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 TNNI2P48788 182 aa20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 KIF23Q02241 960 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 DEFB129Q9H1M3 183 aa20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 VEZTQ9HBM0 779 aa20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 SAGE1Q9NXZ1 904 aa20.63■□□□□ 0.89
PDLIM2-217ENST00000491330 MAST3O60307 1309 aa20.62■□□□□ 0.89
PDLIM2-217ENST00000491330 IRS2Q9Y4H2 1338 aa20.62■□□□□ 0.89
PDLIM2-217ENST00000491330 SLC10A3P09131 477 aa20.62■□□□□ 0.89
PDLIM2-217ENST00000491330 CHAF1AQ13111 956 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-217ENST00000491330 LPIN2Q92539 896 aa20.62■□□□□ 0.89
PDLIM2-217ENST00000491330 FRAT1Q92837 279 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-217ENST00000491330 JAG2Q9Y219 1238 aa20.62■□□□□ 0.89
PDLIM2-217ENST00000491330 SPDYE2BA6NHP3 402 aa20.61■□□□□ 0.89
PDLIM2-217ENST00000491330 SPDYE6P0CI01 402 aa20.61■□□□□ 0.89
PDLIM2-217ENST00000491330 FBXO33Q7Z6M2 555 aa20.61■□□□□ 0.89
PDLIM2-217ENST00000491330 CERS5Q8N5B7 392 aa20.61■□□□□ 0.89
PDLIM2-217ENST00000491330 TMOD2Q9NZR1 351 aa20.61■□□□□ 0.89
PDLIM2-217ENST00000491330 COL1A1P02452 1464 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-217ENST00000491330 UBE2Q2LH0YL09 131 aa20.6■□□□□ 0.89
PDLIM2-217ENST00000491330 CIAO1O76071 339 aa20.6■□□□□ 0.89
PDLIM2-217ENST00000491330 IL15P40933 162 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-217ENST00000491330 PRAMEF18Q5VWM3 479 aa20.6■□□□□ 0.89
PDLIM2-217ENST00000491330 ZBED3Q96IU2 234 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-217ENST00000491330 SUGT1Q9Y2Z0 365 aa20.6■□□□□ 0.89
PDLIM2-217ENST00000491330 ZBED9Q6R2W3 1325 aa20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 UNCXA6NJT0 531 aa20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 HDLBPQ00341 1268 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 SREBF2Q12772 1141 aa20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 INTS3Q68E01 1043 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 KLHDC4Q8TBB5 520 aa20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 WDR66Q8TBY9 1149 aa20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 SLC10A4Q96EP9 437 aa20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 ANGEL1Q9UNK9 670 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-217ENST00000491330 CLRN2A0PK11 232 aa20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 FAM155AB1AL88 458 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 IREB2P48200 963 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 PRKG1Q13976 671 aa20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 TEKT1Q969V4 418 aa20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 HOOK2Q96ED9 719 aa20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 SCAF8Q9UPN6 1271 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 LRRFIP2Q9Y608 721 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-217ENST00000491330 PSME4Q14997 1843 aa20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 ATP2B3Q16720 1220 aa20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 RASAL3Q86YV0 1011 aa20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 PRMT6Q96LA8 375 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 SIL1Q9H173 461 aa20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 IQSEC3Q9UPP2 1182 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 AKAP2Q9Y2D5 859 aa20.57■□□□□ 0.88
PDLIM2-217ENST00000491330 TRPA1O75762 1119 aa20.56■□□□□ 0.88
PDLIM2-217ENST00000491330 BCAMP50895 628 aa20.56■□□□□ 0.88
PDLIM2-217ENST00000491330 ZKSCAN2Q63HK3 967 aa20.56■□□□□ 0.88
PDLIM2-217ENST00000491330 VGLL2Q8N8G2 317 aa20.56■□□□□ 0.88
PDLIM2-217ENST00000491330 MRIQ9BWK5 157 aa20.56■□□□□ 0.88
PDLIM2-217ENST00000491330 TSKSQ9UJT2 592 aa20.56■□□□□ 0.88
PDLIM2-217ENST00000491330 GNAI2P04899 355 aa20.55■□□□□ 0.88
PDLIM2-217ENST00000491330 CRKP46108 304 aa20.55■□□□□ 0.88
PDLIM2-217ENST00000491330 INHBEP58166 350 aa20.55■□□□□ 0.88
PDLIM2-217ENST00000491330 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-217ENST00000491330 DZIP1LQ8IYY4 767 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms