RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC3-208	ENST00000491292	PRC1	O43663	620 aa		11.29	□□□□□ -0.6
ERCC3-208	ENST00000491292	ESCO1	Q5FWF5	840 aa		11.29	□□□□□ -0.6
ERCC3-208	ENST00000491292	ACBD3	Q9H3P7	528 aa		11.29	□□□□□ -0.6
ERCC3-208	ENST00000491292	AATK	Q6ZMQ8	1374 aa		11.29	□□□□□ -0.6
ERCC3-208	ENST00000491292	CEBPA	P49715	358 aa	Predicted RBP	11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	SARM1	Q6SZW1	724 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	PHKB	Q93100	1093 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	ARHGAP31	Q2M1Z3	1444 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292		A0A0G2JLW4	131 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	ALDH1L1	O75891	902 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	DHX58	Q96C10	678 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	AIFM3	Q96NN9	605 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	MYL10	Q9BUA6	226 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	DBNL	Q9UJU6	430 aa	Known RBP	11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	FHOD1	Q9Y613	1164 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	PPRC1	Q5VV67	1664 aa	Known RBP	11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	CD163L1	Q9NR16	1453 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	MYO1C	O00159	1063 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	IDH1	O75874	414 aa	Known RBP	11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	CHMP4BP1	P59074	171 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	FILIP1L	Q4L180	1135 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	ANO1	Q5XXA6	986 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	ADAL	Q6DHV7	355 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	MICALL1	Q8N3F8	863 aa		11.28	□□□□□ -0.6
ERCC3-208	ENST00000491292	ZC3H6	P61129	1189 aa	Known RBP	11.27	□□□□□ -0.6
ERCC3-208	ENST00000491292	TNNI3K	Q59H18	835 aa		11.27	□□□□□ -0.6
ERCC3-208	ENST00000491292	NAA16	Q6N069	864 aa	Predicted RBP	11.27	□□□□□ -0.6
ERCC3-208	ENST00000491292	CAPZA3	Q96KX2	299 aa		11.27	□□□□□ -0.6
ERCC3-208	ENST00000491292	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.27	□□□□□ -0.6
ERCC3-208	ENST00000491292	FPGT-TNNI3K	V9GXZ4	949 aa		11.27	□□□□□ -0.6
ERCC3-208	ENST00000491292	SETBP1	Q9Y6X0	1596 aa		11.27	□□□□□ -0.6
ERCC3-208	ENST00000491292	PSD	A5PKW4	1024 aa	Predicted RBP	11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292		E7EWF7	191 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	GPIHBP1	Q8IV16	184 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	WDR24	Q96S15	920 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	PAG1	Q9NWQ8	432 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	NFE2L3	Q9Y4A8	694 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	CRB1	P82279	1406 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	KIAA1210	Q9ULL0	1709 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	MAP2	P11137	1827 aa	Known RBP	11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	EFCAB8	A8MWE9	144 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	MATR3	P43243	847 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	DNA2	P51530	1060 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	LONRF2	Q1L5Z9	754 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	MYSM1	Q5VVJ2	828 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	RAPGEF4	Q8WZA2	1011 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	ZNF594	Q96JF6	807 aa	Predicted RBP	11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	SLC26A6	Q9BXS9	759 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	ADAM21	Q9UKJ8	722 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	MTMR7	Q9Y216	660 aa		11.27	□□□□□ -0.61
ERCC3-208	ENST00000491292	NBPF6	Q5VWK0	638 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	NBPF4	Q96M43	638 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	ZNF213	O14771	459 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	PFKFB2	O60825	505 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	PDIA3	P30101	505 aa	Known RBP	11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	NOC3L	Q8WTT2	800 aa	Known RBP	11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	SMARCC1	Q92922	1105 aa	Predicted RBP	11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	NUP88	Q99567	741 aa	Predicted RBP	11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	CEP126	Q9P2H0	1117 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	RRP15	Q9Y3B9	282 aa	Known RBP	11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	SETD1B	Q9UPS6	1966 aa	Known RBP	11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	NRXN1	Q9ULB1	1477 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	CCDC175	P0C221	793 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	TTC31	Q49AM3	519 aa	Predicted RBP	11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	STAM	Q92783	540 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	FAN1	Q9Y2M0	1017 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	RERE	Q9P2R6	1566 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	ATP7B	P35670	1465 aa		11.26	□□□□□ -0.61
ERCC3-208	ENST00000491292	IPO7	O95373	1038 aa	Known RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	ADD1	P35611	737 aa	Known RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CCT6A	P40227	531 aa	Known RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	DHX8	Q14562	1220 aa	Known RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	E2F4	Q16254	413 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CCDC158	Q5M9N0	1113 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	ANKRD13D	Q6ZTN6	518 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CRACR2A	Q9BSW2	395 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CENPH	Q9H3R5	247 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	ZBTB3	Q9H5J0	574 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	GUCA1B	Q9UMX6	200 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	ARHGAP6	O43182	974 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	METAP2	P50579	478 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	NAP1L1	P55209	391 aa	Known RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	GRAMD1C	Q8IYS0	662 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	GPR161	Q8N6U8	529 aa	Known RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	MYO3A	Q8NEV4	1616 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	EPHA10	Q5JZY3	1008 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	TOGARAM2	Q6ZUX3	1019 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	STOX1	Q6ZVD7	989 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	LINC00301	Q8NCQ3	95 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	RUFY1	Q96T51	708 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	SUGCT	Q9HAC7	445 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CTAGE15	A4D2H0	777 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CTAGE8	P0CG41	777 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	IARS	P41252	1262 aa	Known RBP	11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CTAGE6	Q86UF2	777 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	CTAGE4	Q8IX94	777 aa		11.25	□□□□□ -0.61
ERCC3-208	ENST00000491292	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms