RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 TBC1D16Q8TBP0 767 aa8.53□□□□□ -1.04
PBX3-208ENST00000491160 PLEKHF1Q96S99 279 aa8.53□□□□□ -1.04
PBX3-208ENST00000491160 TRIOBPQ9H2D6 2365 aa8.53□□□□□ -1.04
PBX3-208ENST00000491160 LAMA3Q16787 3333 aa8.52□□□□□ -1.04
PBX3-208ENST00000491160 CUL9Q8IWT3 2517 aa8.52□□□□□ -1.04
PBX3-208ENST00000491160 ATP5J2-PTCD1G3V325 749 aa8.52□□□□□ -1.05
PBX3-208ENST00000491160 GPR25O00155 361 aa8.52□□□□□ -1.05
PBX3-208ENST00000491160 VIL1P09327 827 aaKnown RBP8.52□□□□□ -1.05
PBX3-208ENST00000491160 PKN2Q16513 984 aaKnown RBP8.52□□□□□ -1.05
PBX3-208ENST00000491160 EYA3Q99504 573 aa8.52□□□□□ -1.05
PBX3-208ENST00000491160 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
PBX3-208ENST00000491160 R3HDMLQ9H3Y0 253 aa8.52□□□□□ -1.05
PBX3-208ENST00000491160 GPHNQ9NQX3 736 aaPredicted RBP8.52□□□□□ -1.05
PBX3-208ENST00000491160 PPP1R37O75864 691 aa8.51□□□□□ -1.05
PBX3-208ENST00000491160 ZNF280AP59817 542 aaPredicted RBP8.51□□□□□ -1.05
PBX3-208ENST00000491160 TTLL12Q14166 644 aaPredicted RBP8.51□□□□□ -1.05
PBX3-208ENST00000491160 SF3B3Q15393 1217 aaKnown RBP8.51□□□□□ -1.05
PBX3-208ENST00000491160 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
PBX3-208ENST00000491160 HABP4Q5JVS0 413 aaKnown RBP8.51□□□□□ -1.05
PBX3-208ENST00000491160 FBXO46Q6PJ61 603 aaPredicted RBP8.51□□□□□ -1.05
PBX3-208ENST00000491160 KCNK17Q96T54 332 aa8.51□□□□□ -1.05
PBX3-208ENST00000491160 MYOZ2Q9NPC6 264 aa8.51□□□□□ -1.05
PBX3-208ENST00000491160 PAPPA2Q9BXP8 1791 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 UFL1O94874 794 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 TM4SF4P48230 202 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
PBX3-208ENST00000491160 FKBP1BP68106 108 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 PRKG1Q13976 671 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 NBPF9Q3BBW0 867 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
PBX3-208ENST00000491160 GCC1Q96CN9 775 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.5□□□□□ -1.05
PBX3-208ENST00000491160 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
PBX3-208ENST00000491160 WTIPA6NIX2 430 aaPredicted RBP8.49□□□□□ -1.05
PBX3-208ENST00000491160 IRS4O14654 1257 aaPredicted RBP8.49□□□□□ -1.05
PBX3-208ENST00000491160 FKTNO75072 461 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 USP17L8P0C7I0 530 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 RIPK4P57078 832 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
PBX3-208ENST00000491160 ISCA1Q9BUE6 129 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 MXD3Q9BW11 206 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 CHPF2Q9P2E5 772 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 PSME4Q14997 1843 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 MAPK8IP3Q9UPT6 1336 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 UNC80Q8N2C7 3258 aa8.49□□□□□ -1.05
PBX3-208ENST00000491160 AGBL3Q8NEM8 1001 aa8.48□□□□□ -1.05
PBX3-208ENST00000491160 PLBD2Q8NHP8 589 aa8.48□□□□□ -1.05
PBX3-208ENST00000491160 JARID2Q92833 1246 aaPredicted RBP8.48□□□□□ -1.05
PBX3-208ENST00000491160 GMLQ99445 158 aa8.48□□□□□ -1.05
PBX3-208ENST00000491160 PODXL2Q9NZ53 605 aa8.48□□□□□ -1.05
PBX3-208ENST00000491160 GGA1Q9UJY5 639 aa8.48□□□□□ -1.05
PBX3-208ENST00000491160 FZD1Q9UP38 647 aa8.48□□□□□ -1.05
PBX3-208ENST00000491160 LAMA2P24043 3122 aaKnown RBP8.47□□□□□ -1.05
PBX3-208ENST00000491160 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
PBX3-208ENST00000491160 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
PBX3-208ENST00000491160 PTPN12Q05209 780 aaKnown RBP8.47□□□□□ -1.05
PBX3-208ENST00000491160 USP17L1Q7RTZ2 530 aa8.47□□□□□ -1.05
PBX3-208ENST00000491160 FBXW7Q969H0 707 aa8.47□□□□□ -1.05
PBX3-208ENST00000491160 VPS9D1Q9Y2B5 631 aa8.47□□□□□ -1.05
PBX3-208ENST00000491160 LAS1LQ9Y4W2 734 aaKnown RBP8.47□□□□□ -1.05
PBX3-208ENST00000491160 TRIM17Q9Y577 477 aa8.47□□□□□ -1.05
PBX3-208ENST00000491160 PITPNM2Q9BZ72 1349 aa8.47□□□□□ -1.05
PBX3-208ENST00000491160 SASH1O94885 1247 aa8.46□□□□□ -1.06
PBX3-208ENST00000491160 EN2P19622 333 aaPredicted RBP8.46□□□□□ -1.06
PBX3-208ENST00000491160 FXR1P51114 621 aaKnown RBP eCLIP8.46□□□□□ -1.06
PBX3-208ENST00000491160 SREBF2Q12772 1141 aa8.46□□□□□ -1.06
PBX3-208ENST00000491160 DDX10Q13206 875 aaKnown RBP8.46□□□□□ -1.06
PBX3-208ENST00000491160 DSG2Q14126 1118 aa8.46□□□□□ -1.06
PBX3-208ENST00000491160 NEUROD2Q15784 382 aa8.46□□□□□ -1.06
PBX3-208ENST00000491160 NOM1Q5C9Z4 860 aaKnown RBP8.46□□□□□ -1.06
PBX3-208ENST00000491160 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
PBX3-208ENST00000491160 SLC4A5Q9BY07 1137 aa8.46□□□□□ -1.06
PBX3-208ENST00000491160 GOLGA8CPA6NN73 597 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 WNT10BO00744 389 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 NF2P35240 595 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 TMPOP42166 694 aaKnown RBP8.45□□□□□ -1.06
PBX3-208ENST00000491160 PTPN5P54829 565 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 SPRYD7Q5W111 196 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 PNNQ9H307 717 aaKnown RBP8.45□□□□□ -1.06
PBX3-208ENST00000491160 BABAM1Q9NWV8 329 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 ANGEL1Q9UNK9 670 aaKnown RBP8.45□□□□□ -1.06
PBX3-208ENST00000491160 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 SPEF2Q9C093 1822 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 ZNF609O15014 1411 aa8.45□□□□□ -1.06
PBX3-208ENST00000491160 CHL1O00533 1208 aa8.44□□□□□ -1.06
PBX3-208ENST00000491160 DACT2Q5SW24 774 aa8.44□□□□□ -1.06
PBX3-208ENST00000491160 ARMC9Q7Z3E5 817 aa8.44□□□□□ -1.06
PBX3-208ENST00000491160 PODNQ7Z5L7 613 aa8.44□□□□□ -1.06
PBX3-208ENST00000491160 ZBTB38Q8NAP3 1195 aaPredicted RBP8.44□□□□□ -1.06
PBX3-208ENST00000491160 MYD88Q99836 296 aa8.44□□□□□ -1.06
PBX3-208ENST00000491160 DBF4Q9UBU7 674 aaPredicted RBP8.44□□□□□ -1.06
PBX3-208ENST00000491160 VCANP13611 3396 aa8.44□□□□□ -1.06
PBX3-208ENST00000491160 ZNF646O15015 1829 aaPredicted RBP8.44□□□□□ -1.06
PBX3-208ENST00000491160 XDHP47989 1333 aa8.44□□□□□ -1.06
PBX3-208ENST00000491160 RBBP6Q7Z6E9 1792 aaKnown RBP8.43□□□□□ -1.06
PBX3-208ENST00000491160 IGF2BP3O00425 579 aaKnown RBP eCLIP8.43□□□□□ -1.06
PBX3-208ENST00000491160 ANP32CO43423 234 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms