RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 SAPCD2Q86UD0 394 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 KIAA0825Q8IV33 1275 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 SULF1Q8IWU6 871 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 TMEM57Q8N5G2 664 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 MTMR14Q8NCE2 650 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 HHIPL1Q96JK4 782 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 HDAC9Q9UKV0 1011 aa18.98■□□□□ 0.63
COL27A1-206ENST00000490831 ADM5C9JUS6 153 aa18.97■□□□□ 0.63
COL27A1-206ENST00000490831 NBPF9Q3BBW0 867 aa18.97■□□□□ 0.63
COL27A1-206ENST00000490831 DLK2Q6UY11 383 aa18.97■□□□□ 0.63
COL27A1-206ENST00000490831 GNAI2P04899 355 aa18.96■□□□□ 0.63
COL27A1-206ENST00000490831 IL15P40933 162 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-206ENST00000490831 CAVIN4Q5BKX8 364 aa18.96■□□□□ 0.63
COL27A1-206ENST00000490831 LPIN2Q92539 896 aa18.96■□□□□ 0.63
COL27A1-206ENST00000490831 IFIT1P09914 478 aaKnown RBP18.95■□□□□ 0.62
COL27A1-206ENST00000490831 DZIP1LQ8IYY4 767 aaKnown RBP18.95■□□□□ 0.62
COL27A1-206ENST00000490831 SIL1Q9H173 461 aa18.95■□□□□ 0.62
COL27A1-206ENST00000490831 PA2G4Q9UQ80 394 aaKnown RBP18.95■□□□□ 0.62
COL27A1-206ENST00000490831 THSD7BQ9C0I4 1608 aa18.95■□□□□ 0.62
COL27A1-206ENST00000490831 WDR33Q9C0J8 1336 aaKnown RBP18.95■□□□□ 0.62
COL27A1-206ENST00000490831 ZBTB22O15209 634 aa18.94■□□□□ 0.62
COL27A1-206ENST00000490831 SRGAP3O43295 1099 aa18.94■□□□□ 0.62
COL27A1-206ENST00000490831 RLBP1P12271 317 aa18.94■□□□□ 0.62
COL27A1-206ENST00000490831 VPS37DQ86XT2 251 aa18.94■□□□□ 0.62
COL27A1-206ENST00000490831 ZNF408Q9H9D4 720 aa18.94■□□□□ 0.62
COL27A1-206ENST00000490831 CEP126Q9P2H0 1117 aa18.94■□□□□ 0.62
COL27A1-206ENST00000490831 ARAP2Q8WZ64 1704 aa18.94■□□□□ 0.62
COL27A1-206ENST00000490831 SLC5A1P13866 664 aa18.93■□□□□ 0.62
COL27A1-206ENST00000490831 ECE1P42892 770 aa18.93■□□□□ 0.62
COL27A1-206ENST00000490831 BCAMP50895 628 aa18.93■□□□□ 0.62
COL27A1-206ENST00000490831 MFSD14BQ5SR56 506 aa18.93■□□□□ 0.62
COL27A1-206ENST00000490831 FTSJ3Q8IY81 847 aaKnown RBP18.93■□□□□ 0.62
COL27A1-206ENST00000490831 CDCA5Q96FF9 252 aa18.93■□□□□ 0.62
COL27A1-206ENST00000490831 CAPNS2Q96L46 248 aa18.93■□□□□ 0.62
COL27A1-206ENST00000490831 GBA2Q9HCG7 927 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-206ENST00000490831 JAG2Q9Y219 1238 aa18.93■□□□□ 0.62
COL27A1-206ENST00000490831 HSPA1AP0DMV8 641 aaKnown RBP18.92■□□□□ 0.62
COL27A1-206ENST00000490831 HSPA1BP0DMV9 641 aaKnown RBP18.92■□□□□ 0.62
COL27A1-206ENST00000490831 DLGAP5Q15398 846 aa18.92■□□□□ 0.62
COL27A1-206ENST00000490831 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
COL27A1-206ENST00000490831 ZBTB7BO15156 539 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-206ENST00000490831 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
COL27A1-206ENST00000490831 ATP2B3Q16720 1220 aa18.91■□□□□ 0.62
COL27A1-206ENST00000490831 CYP4F22Q6NT55 531 aa18.91■□□□□ 0.62
COL27A1-206ENST00000490831 APOBEC3FQ8IUX4 373 aaKnown RBP18.91■□□□□ 0.62
COL27A1-206ENST00000490831 C2orf69Q8N8R5 385 aa18.91■□□□□ 0.62
COL27A1-206ENST00000490831 TBC1D22AQ8WUA7 517 aa18.91■□□□□ 0.62
COL27A1-206ENST00000490831 SERPINA10Q9UK55 444 aa18.91■□□□□ 0.62
COL27A1-206ENST00000490831 PNMA6EA0A0J9YXQ4 647 aa18.9■□□□□ 0.62
COL27A1-206ENST00000490831 F8W031 263 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-206ENST00000490831 FKBP1BP68106 108 aa18.9■□□□□ 0.62
COL27A1-206ENST00000490831 CFAP100Q494V2 611 aa18.9■□□□□ 0.62
COL27A1-206ENST00000490831 WBP1LQ9NX94 342 aa18.9■□□□□ 0.62
COL27A1-206ENST00000490831 IQSEC3Q9UPP2 1182 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-206ENST00000490831 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-206ENST00000490831 ECM29Q5VYK3 1845 aa18.89■□□□□ 0.61
COL27A1-206ENST00000490831 HUNKP57058 714 aa18.89■□□□□ 0.61
COL27A1-206ENST00000490831 POLA2Q14181 598 aa18.89■□□□□ 0.61
COL27A1-206ENST00000490831 ITPRIPQ8IWB1 547 aa18.89■□□□□ 0.61
COL27A1-206ENST00000490831 TTF2Q9UNY4 1162 aaKnown RBP18.89■□□□□ 0.61
COL27A1-206ENST00000490831 SUGT1Q9Y2Z0 365 aa18.89■□□□□ 0.61
COL27A1-206ENST00000490831 PCDHAC2Q9Y5I4 1007 aa18.89■□□□□ 0.61
COL27A1-206ENST00000490831 FRAT2O75474 233 aaPredicted RBP18.88■□□□□ 0.61
COL27A1-206ENST00000490831 MAP2K2P36507 400 aa18.88■□□□□ 0.61
COL27A1-206ENST00000490831 HDLBPQ00341 1268 aaKnown RBP18.88■□□□□ 0.61
COL27A1-206ENST00000490831 PRMT6Q96LA8 375 aaPredicted RBP18.88■□□□□ 0.61
COL27A1-206ENST00000490831 MRIQ9BWK5 157 aa18.88■□□□□ 0.61
COL27A1-206ENST00000490831 SCAF8Q9UPN6 1271 aaKnown RBP18.88■□□□□ 0.61
COL27A1-206ENST00000490831 PAPPA2Q9BXP8 1791 aa18.88■□□□□ 0.61
COL27A1-206ENST00000490831 MS4A1P11836 297 aa18.87■□□□□ 0.61
COL27A1-206ENST00000490831 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
COL27A1-206ENST00000490831 MAP2K1Q02750 393 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-206ENST00000490831 CHAF1AQ13111 956 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-206ENST00000490831 GRIK5Q16478 980 aa18.87■□□□□ 0.61
COL27A1-206ENST00000490831 PAXIP1Q6ZW49 1069 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-206ENST00000490831 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
COL27A1-206ENST00000490831 AOX1Q06278 1338 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 SEMA3EO15041 775 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 MYO1BO43795 1136 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 TFCP2Q12800 502 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 WDR66Q8TBY9 1149 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 RCAN3Q9UKA8 241 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 AKAP2Q9Y2D5 859 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 PPP2R3BQ9Y5P8 575 aa18.86■□□□□ 0.61
COL27A1-206ENST00000490831 FAM155AB1AL88 458 aaPredicted RBP18.85■□□□□ 0.61
COL27A1-206ENST00000490831 CRKP46108 304 aa18.85■□□□□ 0.61
COL27A1-206ENST00000490831 PRAMEF18Q5VWM3 479 aa18.85■□□□□ 0.61
COL27A1-206ENST00000490831 RGMBQ6NW40 437 aa18.85■□□□□ 0.61
COL27A1-206ENST00000490831 PANK1Q8TE04 598 aa18.85■□□□□ 0.61
COL27A1-206ENST00000490831 DEFB129Q9H1M3 183 aa18.85■□□□□ 0.61
COL27A1-206ENST00000490831 GNL3LQ9NVN8 582 aaKnown RBP18.85■□□□□ 0.61
COL27A1-206ENST00000490831 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.85■□□□□ 0.61
COL27A1-206ENST00000490831 MYH13Q9UKX3 1938 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 SALL1Q9NSC2 1324 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 FOXN1O15353 648 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 AOC2O75106 756 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 ADORA1P30542 326 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 PHKA1P46020 1223 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 RBM5P52756 815 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL27A1-206ENST00000490831 NOGQ13253 232 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms