RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 FAM84BQ96KN1 310 aaPredicted RBP39.28■■■■□ 3.88
LDB1-204ENST00000490751 FKBP1AP62942 108 aaKnown RBP39.27■■■■□ 3.88
LDB1-204ENST00000490751 VGLL2Q8N8G2 317 aa39.27■■■■□ 3.88
LDB1-204ENST00000490751 TDRD7Q8NHU6 1098 aaKnown RBP39.27■■■■□ 3.88
LDB1-204ENST00000490751 PDE8BO95263 885 aa39.26■■■■□ 3.88
LDB1-204ENST00000490751 MAP2K2P36507 400 aa39.26■■■■□ 3.88
LDB1-204ENST00000490751 CTCFP49711 727 aaPredicted RBP39.26■■■■□ 3.88
LDB1-204ENST00000490751 FAM205AQ6ZU69 1335 aa39.25■■■■□ 3.87
LDB1-204ENST00000490751 F8W031 263 aaPredicted RBP39.25■■■■□ 3.87
LDB1-204ENST00000490751 ZBED3Q96IU2 234 aaPredicted RBP39.25■■■■□ 3.87
LDB1-204ENST00000490751 LRRFIP2Q9Y608 721 aaKnown RBP39.24■■■■□ 3.87
LDB1-204ENST00000490751 PTPN12Q05209 780 aaKnown RBP39.23■■■■□ 3.87
LDB1-204ENST00000490751 MEIS3Q99687 375 aa39.23■■■■□ 3.87
LDB1-204ENST00000490751 ARAP2Q8WZ64 1704 aa39.23■■■■□ 3.87
LDB1-204ENST00000490751 ECM29Q5VYK3 1845 aa39.22■■■■□ 3.87
LDB1-204ENST00000490751 EYA2O00167 538 aa39.22■■■■□ 3.87
LDB1-204ENST00000490751 BCAR3O75815 825 aa39.22■■■■□ 3.87
LDB1-204ENST00000490751 DLGAP5Q15398 846 aa39.22■■■■□ 3.87
LDB1-204ENST00000490751 INTS3Q68E01 1043 aaKnown RBP39.22■■■■□ 3.87
LDB1-204ENST00000490751 RGMBQ6NW40 437 aa39.22■■■■□ 3.87
LDB1-204ENST00000490751 HDAC5Q9UQL6 1122 aa39.22■■■■□ 3.87
LDB1-204ENST00000490751 PAPPA2Q9BXP8 1791 aa39.22■■■■□ 3.87
LDB1-204ENST00000490751 VPS37DQ86XT2 251 aa39.21■■■■□ 3.87
LDB1-204ENST00000490751 IPO8O15397 1037 aaKnown RBP39.2■■■■□ 3.87
LDB1-204ENST00000490751 PRAMEF18Q5VWM3 479 aa39.2■■■■□ 3.87
LDB1-204ENST00000490751 FBXO33Q7Z6M2 555 aa39.2■■■■□ 3.87
LDB1-204ENST00000490751 TNS4Q8IZW8 715 aa39.2■■■■□ 3.87
LDB1-204ENST00000490751 FRAT1Q92837 279 aaPredicted RBP39.2■■■■□ 3.87
LDB1-204ENST00000490751 BEGAINQ9BUH8 593 aa39.2■■■■□ 3.87
LDB1-204ENST00000490751 TRIM27P14373 513 aa39.19■■■■□ 3.86
LDB1-204ENST00000490751 APOBEC3FQ8IUX4 373 aaKnown RBP39.19■■■■□ 3.86
LDB1-204ENST00000490751 MTMR14Q8NCE2 650 aa39.19■■■■□ 3.86
LDB1-204ENST00000490751 PRDM10Q9NQV6 1147 aa39.19■■■■□ 3.86
LDB1-204ENST00000490751 NOGQ13253 232 aa39.18■■■■□ 3.86
LDB1-204ENST00000490751 PUM3Q15397 648 aaKnown RBP39.18■■■■□ 3.86
LDB1-204ENST00000490751 CAVIN4Q5BKX8 364 aa39.18■■■■□ 3.86
LDB1-204ENST00000490751 MFSD14BQ5SR56 506 aa39.18■■■■□ 3.86
LDB1-204ENST00000490751 PCDHAC2Q9Y5I4 1007 aa39.18■■■■□ 3.86
LDB1-204ENST00000490751 HSPA8P11142 646 aaKnown RBP39.17■■■■□ 3.86
LDB1-204ENST00000490751 LBX1P52954 281 aa39.17■■■■□ 3.86
LDB1-204ENST00000490751 CFAP100Q494V2 611 aa39.17■■■■□ 3.86
LDB1-204ENST00000490751 ATF7IPQ6VMQ6 1270 aa39.17■■■■□ 3.86
LDB1-204ENST00000490751 IQSEC3Q9UPP2 1182 aaPredicted RBP39.17■■■■□ 3.86
LDB1-204ENST00000490751 TNNQ9UQP3 1299 aa39.17■■■■□ 3.86
LDB1-204ENST00000490751 ZNF157P51786 506 aaPredicted RBP39.16■■■■□ 3.86
LDB1-204ENST00000490751 FKBP1BP68106 108 aa39.16■■■■□ 3.86
LDB1-204ENST00000490751 SIL1Q9H173 461 aa39.16■■■■□ 3.86
LDB1-204ENST00000490751 FGFR2P21802 821 aa39.15■■■■□ 3.86
LDB1-204ENST00000490751 ATG9AQ7Z3C6 839 aa39.15■■■■□ 3.86
LDB1-204ENST00000490751 FAM155AB1AL88 458 aaPredicted RBP39.14■■■■□ 3.86
LDB1-204ENST00000490751 GNAI3P08754 354 aa39.14■■■■□ 3.86
LDB1-204ENST00000490751 IFIT1P09914 478 aaKnown RBP39.14■■■■□ 3.86
LDB1-204ENST00000490751 CCDC102AQ96A19 550 aa39.14■■■■□ 3.86
LDB1-204ENST00000490751 ZIC5Q96T25 663 aa39.14■■■■□ 3.86
LDB1-204ENST00000490751 FBXO3Q9UK99 471 aa39.13■■■■□ 3.85
LDB1-204ENST00000490751 SPDYE2BA6NHP3 402 aa39.12■■■■□ 3.85
LDB1-204ENST00000490751 FRAT2O75474 233 aaPredicted RBP39.12■■■■□ 3.85
LDB1-204ENST00000490751 SPDYE6P0CI01 402 aa39.12■■■■□ 3.85
LDB1-204ENST00000490751 BCAMP50895 628 aa39.12■■■■□ 3.85
LDB1-204ENST00000490751 CHAF1AQ13111 956 aaPredicted RBP39.12■■■■□ 3.85
LDB1-204ENST00000490751 MOB2Q70IA6 237 aa39.12■■■■□ 3.85
LDB1-204ENST00000490751 TTF2Q9UNY4 1162 aaKnown RBP39.12■■■■□ 3.85
LDB1-204ENST00000490751 CIAO1O76071 339 aa39.11■■■■□ 3.85
LDB1-204ENST00000490751 NF2P35240 595 aa39.11■■■■□ 3.85
LDB1-204ENST00000490751 RBM5P52756 815 aaKnown RBP eCLIP39.11■■■■□ 3.85
LDB1-204ENST00000490751 CLUAP1Q96AJ1 413 aa39.11■■■■□ 3.85
LDB1-204ENST00000490751 PRMT6Q96LA8 375 aaPredicted RBP39.11■■■■□ 3.85
LDB1-204ENST00000490751 ZBED9Q6R2W3 1325 aa39.11■■■■□ 3.85
LDB1-204ENST00000490751 COL1A1P02452 1464 aaPredicted RBP39.11■■■■□ 3.85
LDB1-204ENST00000490751 MYO1BO43795 1136 aa39.1■■■■□ 3.85
LDB1-204ENST00000490751 SLC5A1P13866 664 aa39.1■■■■□ 3.85
LDB1-204ENST00000490751 LPIN2Q92539 896 aa39.1■■■■□ 3.85
LDB1-204ENST00000490751 PA2G4Q9UQ80 394 aaKnown RBP39.1■■■■□ 3.85
LDB1-204ENST00000490751 MYH13Q9UKX3 1938 aa39.09■■■■□ 3.85
LDB1-204ENST00000490751 CLRN2A0PK11 232 aa39.09■■■■□ 3.85
LDB1-204ENST00000490751 SLC10A3P09131 477 aa39.09■■■■□ 3.85
LDB1-204ENST00000490751 TTLL12Q14166 644 aaPredicted RBP39.08■■■■□ 3.85
LDB1-204ENST00000490751 AOX1Q06278 1338 aa39.08■■■■□ 3.85
LDB1-204ENST00000490751 ZKSCAN2Q63HK3 967 aa39.07■■■■□ 3.85
LDB1-204ENST00000490751 DEFB129Q9H1M3 183 aa39.07■■■■□ 3.85
LDB1-204ENST00000490751 COPRSQ9NQ92 184 aa39.07■■■■□ 3.85
LDB1-204ENST00000490751 CEP126Q9P2H0 1117 aa39.07■■■■□ 3.85
LDB1-204ENST00000490751 SERPINA10Q9UK55 444 aa39.07■■■■□ 3.85
LDB1-204ENST00000490751 UBE2Q2LH0YL09 131 aa39.06■■■■□ 3.84
LDB1-204ENST00000490751 TBC1D22AQ8WUA7 517 aa39.06■■■■□ 3.84
LDB1-204ENST00000490751 TSKSQ9UJT2 592 aa39.06■■■■□ 3.84
LDB1-204ENST00000490751 IL15P40933 162 aaPredicted RBP39.05■■■■□ 3.84
LDB1-204ENST00000490751 GRIK5Q16478 980 aa39.05■■■■□ 3.84
LDB1-204ENST00000490751 RASAL3Q86YV0 1011 aa39.05■■■■□ 3.84
LDB1-204ENST00000490751 VEZTQ9HBM0 779 aa39.05■■■■□ 3.84
LDB1-204ENST00000490751 CA12O43570 354 aa39.04■■■■□ 3.84
LDB1-204ENST00000490751 KIF23Q02241 960 aaPredicted RBP39.04■■■■□ 3.84
LDB1-204ENST00000490751 ATP2B3Q16720 1220 aa39.04■■■■□ 3.84
LDB1-204ENST00000490751 SRGAP3O43295 1099 aa39.03■■■■□ 3.84
LDB1-204ENST00000490751 MTX1Q13505 466 aa39.02■■■■□ 3.84
LDB1-204ENST00000490751 TMEM57Q8N5G2 664 aa39.02■■■■□ 3.84
LDB1-204ENST00000490751 PPP2R3BQ9Y5P8 575 aa39.02■■■■□ 3.84
LDB1-204ENST00000490751 CRKP46108 304 aa39.01■■■■□ 3.84
LDB1-204ENST00000490751 PRKG1Q13976 671 aa39.01■■■■□ 3.84
LDB1-204ENST00000490751 GNAI2P04899 355 aa39■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms