RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TRAF5O00463 557 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 IRS4O14654 1257 aaPredicted RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 BBOX1O75936 387 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 EPS15P42566 896 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 TRIM28Q13263 835 aaKnown RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 GRAPQ13588 217 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 SF3B3Q15393 1217 aaKnown RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 EAPPQ56P03 285 aaPredicted RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 DDX46Q7L014 1031 aaKnown RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 GRAPLQ8TC17 118 aaPredicted RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 GPR101Q96P66 508 aaPredicted RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
PRPF4B-208ENST00000490653 WDR33Q9C0J8 1336 aaKnown RBP9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 PI4KAP2A4QPH2 592 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 IQCA1LA6NCM1 817 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 PPIP5K2O43314 1243 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 VAMP4O75379 141 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 IGKV5-2P06315 115 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 CALD1Q05682 793 aaKnown RBP9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 EXOSC9Q06265 439 aaKnown RBP9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 TWISTNBQ3B726 338 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 CCDC30Q5VVM6 783 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 MPNDQ8N594 471 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 PI4KAP1Q8N8J0 262 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 METTL22Q9BUU2 404 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 MAP3K2Q9Y2U5 619 aa9.43□□□□□ -0.9
PRPF4B-208ENST00000490653 DDX60Q8IY21 1712 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 SHTN1A0MZ66 631 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 WTIPA6NIX2 430 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 EIF6P56537 245 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 GPSM2P81274 684 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 CXCL9Q07325 125 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 DLK2Q6UY11 383 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 DPP8Q6V1X1 898 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 KSR2Q6VAB6 950 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 JDP2Q8WYK2 163 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 RTFDC1Q9BY42 306 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 KCNQ5Q9NR82 932 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 SCN4AP35499 1836 aa9.42□□□□□ -0.9
PRPF4B-208ENST00000490653 FANCIQ9NVI1 1328 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 YDJCA8MPS7 323 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 AOC2O75106 756 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 GGCXP38435 758 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 RGS19P49795 217 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 COPS2P61201 443 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 CYP4F22Q6NT55 531 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 WDR63Q8IWG1 891 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 GPC2Q8N158 579 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 ZBTB38Q8NAP3 1195 aaPredicted RBP9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 ZIC5Q96T25 663 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 POLLQ9UGP5 575 aa9.41□□□□□ -0.9
PRPF4B-208ENST00000490653 IL16Q14005 1332 aa9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 RAD17O75943 681 aa9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 PCCAP05165 728 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 RPS8P62241 208 aaKnown RBP9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 NIM1KQ8IY84 436 aa9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 CCDC191Q8NCU4 936 aa9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 CAPNS2Q96L46 248 aa9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 CWC25Q9NXE8 425 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 NSFL1CQ9UNZ2 370 aaKnown RBP9.4□□□□□ -0.9
PRPF4B-208ENST00000490653 TNRC18O15417 2968 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-208ENST00000490653 PDE8AO60658 829 aa9.39□□□□□ -0.91
PRPF4B-208ENST00000490653 HIRAP54198 1017 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-208ENST00000490653 KIAA2012Q0VF49 1180 aa9.39□□□□□ -0.91
PRPF4B-208ENST00000490653 DBNDD1Q9H9R9 158 aa9.39□□□□□ -0.91
PRPF4B-208ENST00000490653 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
PRPF4B-208ENST00000490653 NEURL1BA8MQ27 555 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 F6X3S4 739 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 H7C1W4 665 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 DDX58O95786 925 aaKnown RBP9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 GMPSP49915 693 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 CASP7P55210 303 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 FLIIQ13045 1269 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 PNMA8AQ86V59 439 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 SUPT20HQ8NEM7 779 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 TBC1D16Q8TBP0 767 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 AIDAQ96BJ3 306 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 STK31Q9BXU1 1019 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 TMX4Q9H1E5 349 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 TLL2Q9Y6L7 1015 aa9.38□□□□□ -0.91
PRPF4B-208ENST00000490653 DUOX1Q9NRD9 1551 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 SLC4A3P48751 1232 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 WASHC4Q2M389 1173 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 CIAPIN1Q6FI81 312 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 SAPCD2Q86UD0 394 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 TTLL11Q8NHH1 800 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 TRPM4Q8TD43 1214 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 PRR14Q9BWN1 585 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 VPS33BQ9H267 617 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms