RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ELOA3DA6NLF2 546 aaPredicted RBP6.81□□□□□ -1.32
CSTF1-205ENST00000490539 HOXB4P17483 251 aaPredicted RBP6.81□□□□□ -1.32
CSTF1-205ENST00000490539 ITGB7P26010 798 aa6.81□□□□□ -1.32
CSTF1-205ENST00000490539 CHRNA4P43681 627 aa6.81□□□□□ -1.32
CSTF1-205ENST00000490539 ELOA3BQ3SY89 546 aa6.81□□□□□ -1.32
CSTF1-205ENST00000490539 TTC16Q8NEE8 873 aa6.81□□□□□ -1.32
CSTF1-205ENST00000490539 ELOA3Q8NG57 546 aa6.81□□□□□ -1.32
CSTF1-205ENST00000490539 PIK3R5Q8WYR1 880 aa6.81□□□□□ -1.32
CSTF1-205ENST00000490539 FNDC3AQ9Y2H6 1198 aaKnown RBP6.81□□□□□ -1.32
CSTF1-205ENST00000490539 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.81□□□□□ -1.32
CSTF1-205ENST00000490539 C3P01024 1663 aa6.81□□□□□ -1.32
CSTF1-205ENST00000490539 PZPP20742 1482 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 CDK12Q9NYV4 1490 aaPredicted RBP6.8□□□□□ -1.32
CSTF1-205ENST00000490539 C1QTNF8P60827 252 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 TBC1D8BQ0IIM8 1120 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 DOC2BQ14184 412 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 RGL4Q8IZJ4 473 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 CMTR1Q8N1G2 835 aaKnown RBP6.8□□□□□ -1.32
CSTF1-205ENST00000490539 BTBD6Q96KE9 485 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 GSX2Q9BZM3 304 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 UBE2OQ9C0C9 1292 aaKnown RBP6.8□□□□□ -1.32
CSTF1-205ENST00000490539 SAP130Q9H0E3 1048 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 IGFLR1Q9H665 355 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 RTCBQ9Y3I0 505 aaKnown RBP6.8□□□□□ -1.32
CSTF1-205ENST00000490539 NUP155O75694 1391 aa6.8□□□□□ -1.32
CSTF1-205ENST00000490539 NLRP1Q9C000 1473 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 ADARB2-AS1A8MUL3 147 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 PCSK2P16519 638 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 CHSY3Q70JA7 882 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 RAB44Q7Z6P3 723 aaPredicted RBP6.79□□□□□ -1.32
CSTF1-205ENST00000490539 FCHSD1Q86WN1 690 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 TNFRSF25Q93038 417 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 SLC52A1Q9NWF4 448 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 EID1Q9Y6B2 187 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 ABCC3O15438 1527 aa6.79□□□□□ -1.32
CSTF1-205ENST00000490539 PRDM15P57071 1507 aaPredicted RBP6.79□□□□□ -1.32
CSTF1-205ENST00000490539 ARHGAP31Q2M1Z3 1444 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 RPLP1P05386 114 aaKnown RBP6.78□□□□□ -1.32
CSTF1-205ENST00000490539 NFKB1P19838 968 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 CAPN12Q6ZSI9 719 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 ANKLE2Q86XL3 938 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 ETFBKMTQ8IXQ9 262 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 HELQQ8TDG4 1101 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 SLAIN2Q9P270 581 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 SEPT3Q9UH03 358 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 KLF15Q9UIH9 416 aa6.78□□□□□ -1.32
CSTF1-205ENST00000490539 RPRD2Q5VT52 1461 aaKnown RBP6.78□□□□□ -1.32
CSTF1-205ENST00000490539 HFM1A2PYH4 1435 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 DEPDC5O75140 1603 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 SCO2A0A1W2PP80 73 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 OPLAHO14841 1288 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 XYLBO75191 536 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 RARAP10276 462 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 ADH7P40394 386 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 ZAP70P43403 619 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 DGKGP49619 791 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 AAMPQ13685 434 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 ALKBH2Q6NS38 261 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 GTF3C2Q8WUA4 911 aaPredicted RBP6.77□□□□□ -1.33
CSTF1-205ENST00000490539 A2ML1A8K2U0 1454 aa6.77□□□□□ -1.33
CSTF1-205ENST00000490539 SPDYE3A6NKU9 549 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 EGFRP00533 1210 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 RXRBP28702 533 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 GATA4P43694 442 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 SF3B2Q13435 895 aaKnown RBP6.76□□□□□ -1.33
CSTF1-205ENST00000490539 KRT25Q7Z3Z0 450 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 RETREG2Q8NC44 543 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 LMTK2Q8IWU2 1503 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 NAIPQ13075 1403 aa6.76□□□□□ -1.33
CSTF1-205ENST00000490539 UGGT1Q9NYU2 1555 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 CEP170BQ9Y4F5 1589 aaPredicted RBP6.75□□□□□ -1.33
CSTF1-205ENST00000490539 ERVK-7P63135 1459 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 PLA2R1Q13018 1463 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 SASH3O75995 380 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 FAM13AO94988 1023 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 ABL1P00519 1130 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 PSAPP07602 524 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 NOM1Q5C9Z4 860 aaKnown RBP6.75□□□□□ -1.33
CSTF1-205ENST00000490539 ZNF772Q68DY9 489 aaPredicted RBP6.75□□□□□ -1.33
CSTF1-205ENST00000490539 CEP152O94986 1710 aa6.75□□□□□ -1.33
CSTF1-205ENST00000490539 CFAP65Q6ZU64 1925 aaKnown RBP6.74□□□□□ -1.33
CSTF1-205ENST00000490539 CARNS1A5YM72 827 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 TARSP26639 723 aaKnown RBP6.74□□□□□ -1.33
CSTF1-205ENST00000490539 DHX32Q7L7V1 743 aaKnown RBP6.74□□□□□ -1.33
CSTF1-205ENST00000490539 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.74□□□□□ -1.33
CSTF1-205ENST00000490539 GPR152Q8TDT2 470 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 KRTAP4-12Q9BQ66 201 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 RBSNQ9H1K0 784 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 DNAJB12Q9NXW2 375 aaKnown RBP6.74□□□□□ -1.33
CSTF1-205ENST00000490539 NHSL1Q5SYE7 1610 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 MROH1Q8NDA8 1641 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 MYO3AQ8NEV4 1616 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 EFCAB6Q5THR3 1501 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 SETD5Q9C0A6 1442 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 TET3O43151 1660 aa6.74□□□□□ -1.33
CSTF1-205ENST00000490539 UNC13BO14795 1591 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms