RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
LINC00173-204ENST00000489452 ZBED3Q96IU2 234 aaPredicted RBP16.94■□□□□ 0.3
LINC00173-204ENST00000489452 DEFB129Q9H1M3 183 aa16.94■□□□□ 0.3
LINC00173-204ENST00000489452 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
LINC00173-204ENST00000489452 IRS2Q9Y4H2 1338 aa16.94■□□□□ 0.3
LINC00173-204ENST00000489452 CLRN2A0PK11 232 aa16.93■□□□□ 0.3
LINC00173-204ENST00000489452 RBM5P52756 815 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC00173-204ENST00000489452 C15orf52Q6ZUT6 534 aaKnown RBP16.93■□□□□ 0.3
LINC00173-204ENST00000489452 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
LINC00173-204ENST00000489452 AKAP11Q9UKA4 1901 aa16.93■□□□□ 0.3
LINC00173-204ENST00000489452 PAPPA2Q9BXP8 1791 aa16.92■□□□□ 0.3
LINC00173-204ENST00000489452 CACNA1FO60840 1977 aa16.92■□□□□ 0.3
LINC00173-204ENST00000489452 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
LINC00173-204ENST00000489452 IL1R1P14778 569 aa16.92■□□□□ 0.3
LINC00173-204ENST00000489452 CFAP100Q494V2 611 aa16.92■□□□□ 0.3
LINC00173-204ENST00000489452 SUCLG2Q96I99 432 aa16.92■□□□□ 0.3
LINC00173-204ENST00000489452 PRMT6Q96LA8 375 aaPredicted RBP16.92■□□□□ 0.3
LINC00173-204ENST00000489452 PUS3Q9BZE2 481 aaKnown RBP16.92■□□□□ 0.3
LINC00173-204ENST00000489452 VEZTQ9HBM0 779 aa16.92■□□□□ 0.3
LINC00173-204ENST00000489452 TM4SF4P48230 202 aa16.91■□□□□ 0.3
LINC00173-204ENST00000489452 CTU1Q7Z7A3 348 aaKnown RBP16.91■□□□□ 0.3
LINC00173-204ENST00000489452 SLC10A4Q96EP9 437 aa16.91■□□□□ 0.3
LINC00173-204ENST00000489452 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
LINC00173-204ENST00000489452 GYG1P46976 350 aa16.9■□□□□ 0.3
LINC00173-204ENST00000489452 SOX10P56693 466 aa16.9■□□□□ 0.3
LINC00173-204ENST00000489452 LDLRAD1Q5T700 205 aa16.9■□□□□ 0.3
LINC00173-204ENST00000489452 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
LINC00173-204ENST00000489452 AOX1Q06278 1338 aa16.9■□□□□ 0.3
LINC00173-204ENST00000489452 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.3
LINC00173-204ENST00000489452 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
LINC00173-204ENST00000489452 MYO1BO43795 1136 aa16.89■□□□□ 0.29
LINC00173-204ENST00000489452 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
LINC00173-204ENST00000489452 HIBADHP31937 336 aaKnown RBP16.89■□□□□ 0.29
LINC00173-204ENST00000489452 MTMR14Q8NCE2 650 aa16.89■□□□□ 0.29
LINC00173-204ENST00000489452 KAZALD1Q96I82 304 aa16.89■□□□□ 0.29
LINC00173-204ENST00000489452 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
LINC00173-204ENST00000489452 NBPF12Q5TAG4 269 aaPredicted RBP16.88■□□□□ 0.29
LINC00173-204ENST00000489452 SPRYD7Q5W111 196 aa16.88■□□□□ 0.29
LINC00173-204ENST00000489452 CLMNQ96JQ2 1002 aa16.88■□□□□ 0.29
LINC00173-204ENST00000489452 FAM84BQ96KN1 310 aaPredicted RBP16.88■□□□□ 0.29
LINC00173-204ENST00000489452 R3HDMLQ9H3Y0 253 aa16.88■□□□□ 0.29
LINC00173-204ENST00000489452 ZNF646O15015 1829 aaPredicted RBP16.88■□□□□ 0.29
LINC00173-204ENST00000489452 GPR25O00155 361 aa16.87■□□□□ 0.29
LINC00173-204ENST00000489452 PPP1R12BO60237 982 aaPredicted RBP16.87■□□□□ 0.29
LINC00173-204ENST00000489452 FKBP1AP62942 108 aaKnown RBP16.87■□□□□ 0.29
LINC00173-204ENST00000489452 SREBF2Q12772 1141 aa16.87■□□□□ 0.29
LINC00173-204ENST00000489452 SUPT20HL1Q3ZLR7 823 aa16.87■□□□□ 0.29
LINC00173-204ENST00000489452 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
LINC00173-204ENST00000489452 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
LINC00173-204ENST00000489452 TDRD7Q8NHU6 1098 aaKnown RBP16.87■□□□□ 0.29
LINC00173-204ENST00000489452 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
LINC00173-204ENST00000489452 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
LINC00173-204ENST00000489452 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
LINC00173-204ENST00000489452 RASA3Q14644 834 aa16.86■□□□□ 0.29
LINC00173-204ENST00000489452 RIPOR2Q9Y4F9 1068 aa16.86■□□□□ 0.29
LINC00173-204ENST00000489452 FAM205AQ6ZU69 1335 aa16.86■□□□□ 0.29
LINC00173-204ENST00000489452 CHAF1AQ13111 956 aaPredicted RBP16.85■□□□□ 0.29
LINC00173-204ENST00000489452 LRRC24Q50LG9 513 aa16.85■□□□□ 0.29
LINC00173-204ENST00000489452 VPS37DQ86XT2 251 aa16.85■□□□□ 0.29
LINC00173-204ENST00000489452 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
LINC00173-204ENST00000489452 HPS5Q9UPZ3 1129 aa16.85■□□□□ 0.29
LINC00173-204ENST00000489452 FRAT2O75474 233 aaPredicted RBP16.84■□□□□ 0.29
LINC00173-204ENST00000489452 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
LINC00173-204ENST00000489452 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
LINC00173-204ENST00000489452 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
LINC00173-204ENST00000489452 ZNF70Q9UC06 446 aaPredicted RBP16.84■□□□□ 0.29
LINC00173-204ENST00000489452 PPP2R3BQ9Y5P8 575 aa16.84■□□□□ 0.29
LINC00173-204ENST00000489452 ZNF521Q96K83 1311 aa16.84■□□□□ 0.29
LINC00173-204ENST00000489452 MANSC4A6NHS7 340 aaPredicted RBP16.83■□□□□ 0.28
LINC00173-204ENST00000489452 FKTNO75072 461 aa16.83■□□□□ 0.28
LINC00173-204ENST00000489452 IREB2P48200 963 aaKnown RBP16.83■□□□□ 0.28
LINC00173-204ENST00000489452 GRIK5Q16478 980 aa16.83■□□□□ 0.28
LINC00173-204ENST00000489452 MROH5Q6ZUA9 1318 aa16.83■□□□□ 0.28
LINC00173-204ENST00000489452 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
LINC00173-204ENST00000489452 ANKRD44Q8N8A2 993 aa16.83■□□□□ 0.28
LINC00173-204ENST00000489452 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
LINC00173-204ENST00000489452 WNK4Q96J92 1243 aa16.83■□□□□ 0.28
LINC00173-204ENST00000489452 UTYO14607 1347 aa16.82■□□□□ 0.28
LINC00173-204ENST00000489452 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
LINC00173-204ENST00000489452 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
LINC00173-204ENST00000489452 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
LINC00173-204ENST00000489452 FBXO33Q7Z6M2 555 aa16.82■□□□□ 0.28
LINC00173-204ENST00000489452 IFNL1Q8IU54 200 aa16.82■□□□□ 0.28
LINC00173-204ENST00000489452 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
LINC00173-204ENST00000489452 SSC5DA1L4H1 1573 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 CRKP46108 304 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 BCAMP50895 628 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 INHBEP58166 350 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
LINC00173-204ENST00000489452 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 CAVIN4Q5BKX8 364 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 USP44Q9H0E7 712 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 PDE4DIPQ5VU43 2346 aa16.81■□□□□ 0.28
LINC00173-204ENST00000489452 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
LINC00173-204ENST00000489452 E9PSI1 815 aa16.8■□□□□ 0.28
LINC00173-204ENST00000489452 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC00173-204ENST00000489452 PDE8BO95263 885 aa16.8■□□□□ 0.28
LINC00173-204ENST00000489452 ALDH1A1P00352 501 aa16.8■□□□□ 0.28
LINC00173-204ENST00000489452 GJA5P36382 358 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms