RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 FGFR2P21802 821 aa23.69■■□□□ 1.38
MRPL55-230ENST00000489430 GYG1P46976 350 aa23.69■■□□□ 1.38
MRPL55-230ENST00000489430 ATG9AQ7Z3C6 839 aa23.69■■□□□ 1.38
MRPL55-230ENST00000489430 CERS5Q8N5B7 392 aa23.69■■□□□ 1.38
MRPL55-230ENST00000489430 ADM5C9JUS6 153 aa23.68■■□□□ 1.38
MRPL55-230ENST00000489430 IL15P40933 162 aaPredicted RBP23.68■■□□□ 1.38
MRPL55-230ENST00000489430 LPIN2Q92539 896 aa23.68■■□□□ 1.38
MRPL55-230ENST00000489430 ZBED3Q96IU2 234 aaPredicted RBP23.68■■□□□ 1.38
MRPL55-230ENST00000489430 TRPM7Q96QT4 1865 aa23.68■■□□□ 1.38
MRPL55-230ENST00000489430 ZNF646O15015 1829 aaPredicted RBP23.68■■□□□ 1.38
MRPL55-230ENST00000489430 ASTN2O75129 1339 aaPredicted RBP23.67■■□□□ 1.38
MRPL55-230ENST00000489430 GNAI2P04899 355 aa23.67■■□□□ 1.38
MRPL55-230ENST00000489430 NBPF9Q3BBW0 867 aa23.67■■□□□ 1.38
MRPL55-230ENST00000489430 ZNF408Q9H9D4 720 aa23.67■■□□□ 1.38
MRPL55-230ENST00000489430 C2orf69Q8N8R5 385 aa23.66■■□□□ 1.38
MRPL55-230ENST00000489430 TBC1D22AQ8WUA7 517 aa23.66■■□□□ 1.38
MRPL55-230ENST00000489430 CLUAP1Q96AJ1 413 aa23.66■■□□□ 1.38
MRPL55-230ENST00000489430 CAPNS2Q96L46 248 aa23.66■■□□□ 1.38
MRPL55-230ENST00000489430 CEP126Q9P2H0 1117 aa23.66■■□□□ 1.38
MRPL55-230ENST00000489430 HSPA1AP0DMV8 641 aaKnown RBP23.65■■□□□ 1.38
MRPL55-230ENST00000489430 HSPA1BP0DMV9 641 aaKnown RBP23.65■■□□□ 1.38
MRPL55-230ENST00000489430 SLC5A1P13866 664 aa23.65■■□□□ 1.38
MRPL55-230ENST00000489430 FKBP1BP68106 108 aa23.65■■□□□ 1.38
MRPL55-230ENST00000489430 DLGAP5Q15398 846 aa23.65■■□□□ 1.38
MRPL55-230ENST00000489430 MFSD14BQ5SR56 506 aa23.65■■□□□ 1.38
MRPL55-230ENST00000489430 CDCA5Q96FF9 252 aa23.65■■□□□ 1.38
MRPL55-230ENST00000489430 GBA2Q9HCG7 927 aaPredicted RBP23.65■■□□□ 1.38
MRPL55-230ENST00000489430 ZBTB22O15209 634 aa23.64■■□□□ 1.37
MRPL55-230ENST00000489430 SRGAP3O43295 1099 aa23.64■■□□□ 1.37
MRPL55-230ENST00000489430 MAP2K2P36507 400 aa23.64■■□□□ 1.37
MRPL55-230ENST00000489430 MAP2K1Q02750 393 aaPredicted RBP23.64■■□□□ 1.37
MRPL55-230ENST00000489430 APOBEC3FQ8IUX4 373 aaKnown RBP23.64■■□□□ 1.37
MRPL55-230ENST00000489430 FTSJ3Q8IY81 847 aaKnown RBP23.64■■□□□ 1.37
MRPL55-230ENST00000489430 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.37
MRPL55-230ENST00000489430 TMEM57Q8N5G2 664 aa23.64■■□□□ 1.37
MRPL55-230ENST00000489430 SIL1Q9H173 461 aa23.63■■□□□ 1.37
MRPL55-230ENST00000489430 SERPINA10Q9UK55 444 aa23.63■■□□□ 1.37
MRPL55-230ENST00000489430 SUGT1Q9Y2Z0 365 aa23.63■■□□□ 1.37
MRPL55-230ENST00000489430 MYO1BO43795 1136 aa23.62■■□□□ 1.37
MRPL55-230ENST00000489430 FRAT2O75474 233 aaPredicted RBP23.62■■□□□ 1.37
MRPL55-230ENST00000489430 HUNKP57058 714 aa23.62■■□□□ 1.37
MRPL55-230ENST00000489430 CYP4F22Q6NT55 531 aa23.62■■□□□ 1.37
MRPL55-230ENST00000489430 WBP1LQ9NX94 342 aa23.62■■□□□ 1.37
MRPL55-230ENST00000489430 TNNQ9UQP3 1299 aa23.62■■□□□ 1.37
MRPL55-230ENST00000489430 SPDYE2BA6NHP3 402 aa23.61■■□□□ 1.37
MRPL55-230ENST00000489430 SPDYE6P0CI01 402 aa23.61■■□□□ 1.37
MRPL55-230ENST00000489430 BCAMP50895 628 aa23.61■■□□□ 1.37
MRPL55-230ENST00000489430 DLK2Q6UY11 383 aa23.61■■□□□ 1.37
MRPL55-230ENST00000489430 PAXIP1Q6ZW49 1069 aaPredicted RBP23.61■■□□□ 1.37
MRPL55-230ENST00000489430 MS4A1P11836 297 aa23.6■■□□□ 1.37
MRPL55-230ENST00000489430 HDLBPQ00341 1268 aaKnown RBP23.6■■□□□ 1.37
MRPL55-230ENST00000489430 ATP2B3Q16720 1220 aa23.6■■□□□ 1.37
MRPL55-230ENST00000489430 CFAP100Q494V2 611 aa23.6■■□□□ 1.37
MRPL55-230ENST00000489430 AIDAQ96BJ3 306 aa23.6■■□□□ 1.37
MRPL55-230ENST00000489430 MRIQ9BWK5 157 aa23.6■■□□□ 1.37
MRPL55-230ENST00000489430 PPP2R3BQ9Y5P8 575 aa23.6■■□□□ 1.37
MRPL55-230ENST00000489430 COL1A1P02452 1464 aaPredicted RBP23.6■■□□□ 1.37
MRPL55-230ENST00000489430 F8W031 263 aaPredicted RBP23.59■■□□□ 1.37
MRPL55-230ENST00000489430 NF2P35240 595 aa23.59■■□□□ 1.37
MRPL55-230ENST00000489430 CCDC102AQ96A19 550 aa23.59■■□□□ 1.37
MRPL55-230ENST00000489430 GNL3LQ9NVN8 582 aaKnown RBP23.59■■□□□ 1.37
MRPL55-230ENST00000489430 TTF2Q9UNY4 1162 aaKnown RBP23.59■■□□□ 1.37
MRPL55-230ENST00000489430 PA2G4Q9UQ80 394 aaKnown RBP23.59■■□□□ 1.37
MRPL55-230ENST00000489430 JAG2Q9Y219 1238 aa23.59■■□□□ 1.37
MRPL55-230ENST00000489430 NOGQ13253 232 aa23.58■■□□□ 1.37
MRPL55-230ENST00000489430 RGMBQ6NW40 437 aa23.58■■□□□ 1.37
MRPL55-230ENST00000489430 AKAP2Q9Y2D5 859 aa23.58■■□□□ 1.37
MRPL55-230ENST00000489430 SEMA3EO15041 775 aa23.57■■□□□ 1.36
MRPL55-230ENST00000489430 WDR66Q8TBY9 1149 aa23.57■■□□□ 1.36
MRPL55-230ENST00000489430 PRMT6Q96LA8 375 aaPredicted RBP23.57■■□□□ 1.36
MRPL55-230ENST00000489430 THSD7BQ9C0I4 1608 aa23.57■■□□□ 1.36
MRPL55-230ENST00000489430 MAST3O60307 1309 aa23.57■■□□□ 1.36
MRPL55-230ENST00000489430 ZBTB7BO15156 539 aaPredicted RBP23.56■■□□□ 1.36
MRPL55-230ENST00000489430 ITPRIPQ8IWB1 547 aa23.56■■□□□ 1.36
MRPL55-230ENST00000489430 DEFB129Q9H1M3 183 aa23.56■■□□□ 1.36
MRPL55-230ENST00000489430 IQSEC3Q9UPP2 1182 aaPredicted RBP23.56■■□□□ 1.36
MRPL55-230ENST00000489430 CTCFP49711 727 aaPredicted RBP23.55■■□□□ 1.36
MRPL55-230ENST00000489430 RBM5P52756 815 aaKnown RBP eCLIP23.55■■□□□ 1.36
MRPL55-230ENST00000489430 CHAF1AQ13111 956 aaPredicted RBP23.55■■□□□ 1.36
MRPL55-230ENST00000489430 POLR2AP24928 1970 aaKnown RBP23.54■■□□□ 1.36
MRPL55-230ENST00000489430 RLBP1P12271 317 aa23.54■■□□□ 1.36
MRPL55-230ENST00000489430 GRM1Q13255 1194 aa23.54■■□□□ 1.36
MRPL55-230ENST00000489430 TNFAIP1Q13829 316 aa23.54■■□□□ 1.36
MRPL55-230ENST00000489430 BEGAINQ9BUH8 593 aa23.54■■□□□ 1.36
MRPL55-230ENST00000489430 PNMA6EA0A0J9YXQ4 647 aa23.53■■□□□ 1.36
MRPL55-230ENST00000489430 CA12O43570 354 aa23.53■■□□□ 1.36
MRPL55-230ENST00000489430 CRKP46108 304 aa23.53■■□□□ 1.36
MRPL55-230ENST00000489430 ZNF157P51786 506 aaPredicted RBP23.53■■□□□ 1.36
MRPL55-230ENST00000489430 ATP8B2P98198 1209 aa23.53■■□□□ 1.36
MRPL55-230ENST00000489430 POLA2Q14181 598 aa23.53■■□□□ 1.36
MRPL55-230ENST00000489430 SSH3Q8TE77 659 aa23.53■■□□□ 1.36
MRPL55-230ENST00000489430 DENND2AQ9ULE3 1009 aa23.53■■□□□ 1.36
MRPL55-230ENST00000489430 PAPPA2Q9BXP8 1791 aa23.52■■□□□ 1.36
MRPL55-230ENST00000489430 FAM155AB1AL88 458 aaPredicted RBP23.52■■□□□ 1.36
MRPL55-230ENST00000489430 FOXN1O15353 648 aa23.52■■□□□ 1.36
MRPL55-230ENST00000489430 G3BP1Q13283 466 aaKnown RBP eCLIP23.52■■□□□ 1.36
MRPL55-230ENST00000489430 SPDYE2Q495Y8 402 aa23.52■■□□□ 1.36
MRPL55-230ENST00000489430 TEKT1Q969V4 418 aa23.52■■□□□ 1.36
MRPL55-230ENST00000489430 PRDM10Q9NQV6 1147 aa23.52■■□□□ 1.36
MRPL55-230ENST00000489430 SCAF8Q9UPN6 1271 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms