RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ZMYM1Q5SVZ6 1142 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 PAG1Q9NWQ8 432 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 KIAA1468Q9P260 1216 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 PSDA5PKW4 1024 aaPredicted RBP22.68■■□□□ 1.22
HMG20B-213ENST00000488973 TUBB4AP04350 444 aa22.68■■□□□ 1.22
HMG20B-213ENST00000488973 L2HGDHQ9H9P8 463 aa22.68■■□□□ 1.22
HMG20B-213ENST00000488973 HSPD1P10809 573 aaKnown RBP22.67■■□□□ 1.22
HMG20B-213ENST00000488973 EVCP57679 992 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 GUCY1B3Q02153 619 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 FBXO38Q6PIJ6 1188 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 KDM6AO15550 1401 aaPredicted RBP22.67■■□□□ 1.22
HMG20B-213ENST00000488973 CCDC66A2RUB6 948 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 ZRSR1Q15695 479 aaKnown RBP22.67■■□□□ 1.22
HMG20B-213ENST00000488973 ELF2Q15723 593 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 LINC00301Q8NCQ3 95 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 KCNG4Q8TDN1 519 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 GPR108Q9NPR9 543 aa22.67■■□□□ 1.22
HMG20B-213ENST00000488973 RNF216Q9NWF9 866 aaPredicted RBP22.67■■□□□ 1.22
HMG20B-213ENST00000488973 ALS2Q96Q42 1657 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 A0A1B0GVL5 298 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 GOLIM4O00461 696 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 FDPSP14324 419 aaKnown RBP22.66■■□□□ 1.22
HMG20B-213ENST00000488973 NDUFA8P51970 172 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 E4F1Q66K89 784 aaPredicted RBP22.66■■□□□ 1.22
HMG20B-213ENST00000488973 LMOD2Q6P5Q4 547 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 ERCC4Q92889 916 aaPredicted RBP22.66■■□□□ 1.22
HMG20B-213ENST00000488973 ERBB3P21860 1342 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 A0A087WZG4 1122 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 YEATS4O95619 227 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 CASP7P55210 303 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.66■■□□□ 1.22
HMG20B-213ENST00000488973 AXIN2Q9Y2T1 843 aa22.66■■□□□ 1.22
HMG20B-213ENST00000488973 V9GYY5 206 aaPredicted RBP22.66■■□□□ 1.22
HMG20B-213ENST00000488973 TERF2Q15554 542 aa22.65■■□□□ 1.22
HMG20B-213ENST00000488973 ZNF496Q96IT1 587 aaPredicted RBP22.65■■□□□ 1.22
HMG20B-213ENST00000488973 XPO4Q9C0E2 1151 aaKnown RBP22.65■■□□□ 1.22
HMG20B-213ENST00000488973 POLR3EQ9NVU0 708 aa22.65■■□□□ 1.22
HMG20B-213ENST00000488973 SNRPA1P09661 255 aaKnown RBP22.65■■□□□ 1.22
HMG20B-213ENST00000488973 TPM4P67936 248 aa22.65■■□□□ 1.22
HMG20B-213ENST00000488973 STK38Q15208 465 aa22.65■■□□□ 1.22
HMG20B-213ENST00000488973 DPCR1Q3MIW9 517 aa22.65■■□□□ 1.22
HMG20B-213ENST00000488973 NFATC2IPQ8NCF5 419 aa22.65■■□□□ 1.22
HMG20B-213ENST00000488973 PPP1R13BQ96KQ4 1090 aa22.65■■□□□ 1.22
HMG20B-213ENST00000488973 NEDD4P46934 1319 aa22.64■■□□□ 1.21
HMG20B-213ENST00000488973 MMP14P50281 582 aa22.64■■□□□ 1.21
HMG20B-213ENST00000488973 SF3A1Q15459 793 aaKnown RBP22.64■■□□□ 1.21
HMG20B-213ENST00000488973 NRDCO43847 1150 aa22.63■■□□□ 1.21
HMG20B-213ENST00000488973 ARMCX5Q6P1M9 558 aa22.63■■□□□ 1.21
HMG20B-213ENST00000488973 MAST3O60307 1309 aa22.63■■□□□ 1.21
HMG20B-213ENST00000488973 SFPQP23246 707 aaKnown RBP eCLIP22.63■■□□□ 1.21
HMG20B-213ENST00000488973 LMBR1LQ6UX01 489 aa22.63■■□□□ 1.21
HMG20B-213ENST00000488973 TMC6Q7Z403 805 aa22.63■■□□□ 1.21
HMG20B-213ENST00000488973 FBXW7Q969H0 707 aa22.63■■□□□ 1.21
HMG20B-213ENST00000488973 IFNKQ9P0W0 207 aa22.63■■□□□ 1.21
HMG20B-213ENST00000488973 DDX60Q8IY21 1712 aaKnown RBP22.63■■□□□ 1.21
HMG20B-213ENST00000488973 SMC2O95347 1197 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 NLRP12P59046 1061 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 FAM193AP78312 1265 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 CCDC93Q567U6 631 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 NEUROD6Q96NK8 337 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 STRCQ7RTU9 1775 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 A0A0G2JLW4 131 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 RNF113AO15541 343 aaKnown RBP22.62■■□□□ 1.21
HMG20B-213ENST00000488973 ATG9AQ7Z3C6 839 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 BRAPQ7Z569 592 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 CLIC4Q9Y696 253 aa22.62■■□□□ 1.21
HMG20B-213ENST00000488973 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 SPTLC2O15270 562 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 SLC3A2P08195 630 aaKnown RBP22.61■■□□□ 1.21
HMG20B-213ENST00000488973 PHKG2P15735 406 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 RAPGEF4Q8WZA2 1011 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 TSPYL1Q9H0U9 437 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 NWD2Q9ULI1 1742 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 ATP5J2-PTCD1G3V325 749 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 PTCD1O75127 700 aaKnown RBP22.61■■□□□ 1.21
HMG20B-213ENST00000488973 H2AFXP16104 143 aaPredicted RBP22.61■■□□□ 1.21
HMG20B-213ENST00000488973 CHST3Q7LGC8 479 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 C8orf76Q96K31 380 aa22.61■■□□□ 1.21
HMG20B-213ENST00000488973 DHX16O60231 1041 aaKnown RBP22.6■■□□□ 1.21
HMG20B-213ENST00000488973 FOXO4P98177 505 aa22.6■■□□□ 1.21
HMG20B-213ENST00000488973 DHX37Q8IY37 1157 aaKnown RBP22.6■■□□□ 1.21
HMG20B-213ENST00000488973 PLBD2Q8NHP8 589 aa22.6■■□□□ 1.21
HMG20B-213ENST00000488973 PPFIA3O75145 1194 aa22.6■■□□□ 1.21
HMG20B-213ENST00000488973 NCAPHQ15003 741 aa22.6■■□□□ 1.21
HMG20B-213ENST00000488973 FBXO18Q8NFZ0 1043 aa22.6■■□□□ 1.21
HMG20B-213ENST00000488973 TIGD1Q96MW7 591 aa22.6■■□□□ 1.21
HMG20B-213ENST00000488973 CCDC9Q9Y3X0 531 aaKnown RBP22.6■■□□□ 1.21
HMG20B-213ENST00000488973 IKBKBO14920 756 aa22.59■■□□□ 1.21
HMG20B-213ENST00000488973 CCP110O43303 1012 aa22.59■■□□□ 1.21
HMG20B-213ENST00000488973 ZNF202O95125 648 aa22.59■■□□□ 1.21
HMG20B-213ENST00000488973 IL15P40933 162 aaPredicted RBP22.59■■□□□ 1.21
HMG20B-213ENST00000488973 MYSM1Q5VVJ2 828 aa22.59■■□□□ 1.21
HMG20B-213ENST00000488973 TTC5Q8N0Z6 440 aa22.59■■□□□ 1.21
HMG20B-213ENST00000488973 BCCIPQ9P287 314 aaKnown RBP eCLIP22.59■■□□□ 1.21
HMG20B-213ENST00000488973 SYT10Q6XYQ8 523 aa22.59■■□□□ 1.21
HMG20B-213ENST00000488973 TNS3Q68CZ2 1445 aa22.59■■□□□ 1.21
HMG20B-213ENST00000488973 H7C1W4 665 aa22.58■■□□□ 1.21
HMG20B-213ENST00000488973 TULP2O00295 520 aa22.58■■□□□ 1.21
HMG20B-213ENST00000488973 IFIT1P09914 478 aaKnown RBP22.58■■□□□ 1.21
HMG20B-213ENST00000488973 TIMM10P62072 90 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms