RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 MROH5Q6ZUA9 1318 aa14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 CT47B1P0C2W7 299 aaPredicted RBP14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 HIBADHP31937 336 aaKnown RBP14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 DLGAP5Q15398 846 aa14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 METTL24Q5JXM2 366 aa14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
CCHCR1-215ENST00000488920 POLR2AP24928 1970 aaKnown RBP14.98□□□□□ -0.01
CCHCR1-215ENST00000488920 UBE2Q2LH0YL09 131 aa14.98□□□□□ -0.01
CCHCR1-215ENST00000488920 KIF23Q02241 960 aaPredicted RBP14.98□□□□□ -0.01
CCHCR1-215ENST00000488920 TDRD7Q8NHU6 1098 aaKnown RBP14.98□□□□□ -0.01
CCHCR1-215ENST00000488920 PSME4Q14997 1843 aa14.97□□□□□ -0.01
CCHCR1-215ENST00000488920 CA12O43570 354 aa14.97□□□□□ -0.01
CCHCR1-215ENST00000488920 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
CCHCR1-215ENST00000488920 FKBP1AP62942 108 aaKnown RBP14.97□□□□□ -0.01
CCHCR1-215ENST00000488920 FKBP1BP68106 108 aa14.97□□□□□ -0.01
CCHCR1-215ENST00000488920 TTLL12Q14166 644 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-215ENST00000488920 MIER1Q8N108 512 aa14.97□□□□□ -0.01
CCHCR1-215ENST00000488920 FAM205AQ6ZU69 1335 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 THSD7BQ9C0I4 1608 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 PDE8BO95263 885 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 SLC10A3P09131 477 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 CFAP100Q494V2 611 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 FBXO33Q7Z6M2 555 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 VPS37DQ86XT2 251 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 APOBEC3FQ8IUX4 373 aaKnown RBP14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 MTMR14Q8NCE2 650 aa14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 PRMT6Q96LA8 375 aaPredicted RBP14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 API5Q9BZZ5 524 aaKnown RBP14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 IQSEC3Q9UPP2 1182 aaPredicted RBP14.96□□□□□ -0.01
CCHCR1-215ENST00000488920 CLRN2A0PK11 232 aa14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 UBTFL1P0CB47 393 aaPredicted RBP14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 NF2P35240 595 aa14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 RFX5P48382 616 aaPredicted RBP14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 RBM5P52756 815 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 PRKG1Q13976 671 aa14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 MFSD14BQ5SR56 506 aa14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 RASAL3Q86YV0 1011 aa14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 VGLL2Q8N8G2 317 aa14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 DEFB129Q9H1M3 183 aa14.95□□□□□ -0.02
CCHCR1-215ENST00000488920 AOX1Q06278 1338 aa14.94□□□□□ -0.02
CCHCR1-215ENST00000488920 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
CCHCR1-215ENST00000488920 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
CCHCR1-215ENST00000488920 BCAMP50895 628 aa14.94□□□□□ -0.02
CCHCR1-215ENST00000488920 CHAF1AQ13111 956 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-215ENST00000488920 CAVIN4Q5BKX8 364 aa14.94□□□□□ -0.02
CCHCR1-215ENST00000488920 CSRNP1Q96S65 589 aa14.94□□□□□ -0.02
CCHCR1-215ENST00000488920 EYA2O00167 538 aa14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 MYO1BO43795 1136 aa14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 PTPN12Q05209 780 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 VEZTQ9HBM0 779 aa14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 TTF2Q9UNY4 1162 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 ZNF646O15015 1829 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-215ENST00000488920 TRPA1O75762 1119 aa14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 PUM3Q15397 648 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 GRIK5Q16478 980 aa14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 ARMC9Q7Z3E5 817 aa14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 SIL1Q9H173 461 aa14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 RNF186Q9NXI6 227 aa14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 FZD1Q9UP38 647 aa14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 LRRFIP2Q9Y608 721 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-215ENST00000488920 BCAR3O75815 825 aa14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 IFIT1P09914 478 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 FGFR2P21802 821 aa14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 ATG9AQ7Z3C6 839 aa14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 ARHGAP45Q92619 1136 aa14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 MEIS3Q99687 375 aa14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 SERPINA10Q9UK55 444 aa14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 ANGEL1Q9UNK9 670 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-215ENST00000488920 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 FRAT1Q92837 279 aaPredicted RBP14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 ABHD8Q96I13 439 aa14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 TDRD3Q9H7E2 651 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 ZNF70Q9UC06 446 aaPredicted RBP14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 A0A1B0GUL6 1792 aa14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
CCHCR1-215ENST00000488920 PAPPA2Q9BXP8 1791 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 IPO8O15397 1037 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 SLC5A1P13866 664 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 CRKP46108 304 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 HNRNPUQ00839 825 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 RASA3Q14644 834 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 LDLRAD1Q5T700 205 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 NBPF12Q5TAG4 269 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 REM2Q8IYK8 340 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 LPIN2Q92539 896 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 SAGE1Q9NXZ1 904 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 CEP126Q9P2H0 1117 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 PA2G4Q9UQ80 394 aaKnown RBP14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 TNNQ9UQP3 1299 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 PPP2R3BQ9Y5P8 575 aa14.89□□□□□ -0.03
CCHCR1-215ENST00000488920 CIAO1O76071 339 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms