RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MSMPQ1L6U9 139 aa6.4□□□□□ -1.38
CCDC93-209ENST00000488908 C12orf50Q8NA57 414 aaPredicted RBP6.4□□□□□ -1.38
CCDC93-209ENST00000488908 FBXL18Q96ME1 805 aa6.4□□□□□ -1.38
CCDC93-209ENST00000488908 METTL22Q9BUU2 404 aaPredicted RBP6.4□□□□□ -1.38
CCDC93-209ENST00000488908 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.38
CCDC93-209ENST00000488908 CCDC39Q9UFE4 941 aa6.4□□□□□ -1.38
CCDC93-209ENST00000488908 SOX13Q9UN79 622 aa6.4□□□□□ -1.38
CCDC93-209ENST00000488908 ACPPP15309 386 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 PCSK2P16519 638 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 XKR5Q6UX68 686 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 VSIG10LQ86VR7 867 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 C1orf127Q8N9H9 656 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 SMG8Q8ND04 991 aaKnown RBP6.39□□□□□ -1.39
CCDC93-209ENST00000488908 PMEPA1Q969W9 287 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 TMPRSS13Q9BYE2 586 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 SUGCTQ9HAC7 445 aa6.39□□□□□ -1.39
CCDC93-209ENST00000488908 FAM95CA0A1B0GW59 222 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 PRNPP04156 253 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 IKBKEQ14164 716 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 OGFOD2Q6N063 350 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 PAOXQ6QHF9 649 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 TP53INP2Q8IXH6 220 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 TMEM102Q8N9M5 508 aaPredicted RBP6.38□□□□□ -1.39
CCDC93-209ENST00000488908 TTC16Q8NEE8 873 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 ASIC4Q96FT7 647 aa6.38□□□□□ -1.39
CCDC93-209ENST00000488908 TIAF1O95411 115 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 USP11P51784 963 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 NFKBIBQ15653 356 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 CBLL1Q75N03 491 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 ATCAYQ86WG3 371 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 BSNDQ8WZ55 320 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 CLP1Q92989 425 aaKnown RBP6.37□□□□□ -1.39
CCDC93-209ENST00000488908 USP26Q9BXU7 913 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
CCDC93-209ENST00000488908 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.37□□□□□ -1.39
CCDC93-209ENST00000488908 LOC100289279A0A1B0GTE1 492 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 SOX1O00570 391 aaPredicted RBP6.36□□□□□ -1.39
CCDC93-209ENST00000488908 TRPA1O75762 1119 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 ATG7O95352 703 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 JAG1P78504 1218 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 TMEM132AQ24JP5 1023 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 TMEM164Q5U3C3 297 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 HGSNATQ68CP4 663 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 HHIPQ96QV1 700 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 YIPF2Q9BWQ6 316 aa6.36□□□□□ -1.39
CCDC93-209ENST00000488908 BSDC1Q9NW68 430 aaPredicted RBP6.36□□□□□ -1.39
CCDC93-209ENST00000488908 CYP26A1O43174 497 aa6.35□□□□□ -1.39
CCDC93-209ENST00000488908 JUNBP17275 347 aaPredicted RBP6.35□□□□□ -1.39
CCDC93-209ENST00000488908 DNM1Q05193 864 aaKnown RBP6.35□□□□□ -1.39
CCDC93-209ENST00000488908 C8orf34Q49A92 452 aa6.35□□□□□ -1.39
CCDC93-209ENST00000488908 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
CCDC93-209ENST00000488908 FBLIM1Q8WUP2 373 aa6.35□□□□□ -1.39
CCDC93-209ENST00000488908 EDEM1Q92611 657 aa6.35□□□□□ -1.39
CCDC93-209ENST00000488908 NXPE3Q969Y0 559 aa6.35□□□□□ -1.39
CCDC93-209ENST00000488908 OSMRQ99650 979 aa6.35□□□□□ -1.39
CCDC93-209ENST00000488908 SOX17Q9H6I2 414 aaPredicted RBP6.35□□□□□ -1.39
CCDC93-209ENST00000488908 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.34□□□□□ -1.39
CCDC93-209ENST00000488908 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
CCDC93-209ENST00000488908 VN1R5Q7Z5H4 357 aa6.34□□□□□ -1.39
CCDC93-209ENST00000488908 ZAR1Q86SH2 424 aa6.34□□□□□ -1.39
CCDC93-209ENST00000488908 POU5F2Q8N7G0 328 aa6.34□□□□□ -1.39
CCDC93-209ENST00000488908 AGBL5Q8NDL9 886 aa6.34□□□□□ -1.39
CCDC93-209ENST00000488908 TBC1D32Q96NH3 1257 aa6.34□□□□□ -1.39
CCDC93-209ENST00000488908 ZKSCAN3Q9BRR0 538 aa6.34□□□□□ -1.39
CCDC93-209ENST00000488908 CHRDQ9H2X0 955 aa6.34□□□□□ -1.39
CCDC93-209ENST00000488908 PDGFAP04085 211 aa6.33□□□□□ -1.4
CCDC93-209ENST00000488908 DRD2P14416 443 aa6.33□□□□□ -1.4
CCDC93-209ENST00000488908 SRPK2P78362 688 aaKnown RBP6.33□□□□□ -1.4
CCDC93-209ENST00000488908 CDPF1Q6NVV7 123 aa6.33□□□□□ -1.4
CCDC93-209ENST00000488908 NFXL1Q6ZNB6 911 aa6.33□□□□□ -1.4
CCDC93-209ENST00000488908 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
CCDC93-209ENST00000488908 GGNBP2Q9H3C7 697 aa6.33□□□□□ -1.4
CCDC93-209ENST00000488908 SEPT3Q9UH03 358 aa6.33□□□□□ -1.4
CCDC93-209ENST00000488908 A6NHS1 94 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 DLGAP3O95886 979 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 C8AP07357 584 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 EDN3P14138 238 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 ITGB5P18084 799 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 MZF1P28698 734 aaPredicted RBP6.32□□□□□ -1.4
CCDC93-209ENST00000488908 NOM1Q5C9Z4 860 aaKnown RBP6.32□□□□□ -1.4
CCDC93-209ENST00000488908 SHISA5Q8N114 240 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 FLCNQ8NFG4 579 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 HELQQ8TDG4 1101 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 ASAP3Q8TDY4 903 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 EZH1Q92800 747 aaPredicted RBP6.32□□□□□ -1.4
CCDC93-209ENST00000488908 PRKAG2Q9UGJ0 569 aa6.32□□□□□ -1.4
CCDC93-209ENST00000488908 ATP2B4P23634 1241 aa6.31□□□□□ -1.4
CCDC93-209ENST00000488908 ADMP35318 185 aa6.31□□□□□ -1.4
CCDC93-209ENST00000488908 SOX4Q06945 474 aaPredicted RBP6.31□□□□□ -1.4
CCDC93-209ENST00000488908 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
CCDC93-209ENST00000488908 EREGO14944 169 aa6.3□□□□□ -1.4
CCDC93-209ENST00000488908 PHACTR2O75167 634 aa6.3□□□□□ -1.4
CCDC93-209ENST00000488908 ESRRAP11474 423 aaPredicted RBP6.3□□□□□ -1.4
CCDC93-209ENST00000488908 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
CCDC93-209ENST00000488908 GSTM4Q03013 218 aa6.3□□□□□ -1.4
CCDC93-209ENST00000488908 DUSP27Q5VZP5 1158 aa6.3□□□□□ -1.4
CCDC93-209ENST00000488908 FAM170BA6NMN3 283 aa6.29□□□□□ -1.4
CCDC93-209ENST00000488908 EIF1AXP47813 144 aaKnown RBP6.29□□□□□ -1.4
CCDC93-209ENST00000488908 MAP7Q14244 749 aa6.29□□□□□ -1.4
CCDC93-209ENST00000488908 COL19A1Q14993 1142 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms