RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 USP50Q70EL3 339 aaPredicted RBP10.94□□□□□ -0.66
SMKR1-202ENST00000488846 CERS5Q8N5B7 392 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 EXOC6Q8TAG9 804 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 RHPN1Q8TCX5 695 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 KIF1BPQ96EK5 621 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
SMKR1-202ENST00000488846 CNOT7Q9UIV1 285 aaKnown RBP10.94□□□□□ -0.66
SMKR1-202ENST00000488846 FPGT-TNNI3KV9GXZ4 949 aa10.94□□□□□ -0.66
SMKR1-202ENST00000488846 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 PHKA1P46020 1223 aa10.93□□□□□ -0.66
SMKR1-202ENST00000488846 OS9Q13438 667 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 HDAC1Q13547 482 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 CCDC102BQ68D86 513 aa10.93□□□□□ -0.66
SMKR1-202ENST00000488846 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 VPS37DQ86XT2 251 aa10.93□□□□□ -0.66
SMKR1-202ENST00000488846 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
SMKR1-202ENST00000488846 RBM46Q8TBY0 533 aaKnown RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 EAF2Q96CJ1 260 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 ZNF512BQ96KM6 892 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
SMKR1-202ENST00000488846 COL1A1P02452 1464 aaPredicted RBP10.93□□□□□ -0.66
SMKR1-202ENST00000488846 SALL1Q9NSC2 1324 aa10.92□□□□□ -0.66
SMKR1-202ENST00000488846 SHTN1A0MZ66 631 aa10.92□□□□□ -0.66
SMKR1-202ENST00000488846 USP17L8P0C7I0 530 aa10.92□□□□□ -0.66
SMKR1-202ENST00000488846 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
SMKR1-202ENST00000488846 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
SMKR1-202ENST00000488846 GNL3LQ9NVN8 582 aaKnown RBP10.92□□□□□ -0.66
SMKR1-202ENST00000488846 DBNLQ9UJU6 430 aaKnown RBP10.92□□□□□ -0.66
SMKR1-202ENST00000488846 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
SMKR1-202ENST00000488846 H7C1D1 291 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 HIRAP54198 1017 aaPredicted RBP10.91□□□□□ -0.66
SMKR1-202ENST00000488846 LDHDQ86WU2 507 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 WDR66Q8TBY9 1149 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 TBC1D22AQ8WUA7 517 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 ZBED3Q96IU2 234 aaPredicted RBP10.91□□□□□ -0.66
SMKR1-202ENST00000488846 NEUROD6Q96NK8 337 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 DBNDD2Q9BQY9 259 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 MRIQ9BWK5 157 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 DENND2AQ9ULE3 1009 aa10.91□□□□□ -0.66
SMKR1-202ENST00000488846 EGFRP00533 1210 aa10.9□□□□□ -0.66
SMKR1-202ENST00000488846 FSTL1Q12841 308 aa10.9□□□□□ -0.66
SMKR1-202ENST00000488846 RASGRF1Q13972 1273 aa10.9□□□□□ -0.66
SMKR1-202ENST00000488846 MFSD14BQ5SR56 506 aa10.9□□□□□ -0.66
SMKR1-202ENST00000488846 CLASRPQ8N2M8 674 aaKnown RBP10.9□□□□□ -0.66
SMKR1-202ENST00000488846 TRPM4Q8TD43 1214 aa10.9□□□□□ -0.66
SMKR1-202ENST00000488846 LRRCC1Q9C099 1032 aa10.9□□□□□ -0.66
SMKR1-202ENST00000488846 TLR7Q9NYK1 1049 aaKnown RBP10.9□□□□□ -0.66
SMKR1-202ENST00000488846 IQSEC3Q9UPP2 1182 aaPredicted RBP10.9□□□□□ -0.66
SMKR1-202ENST00000488846 AKAP11Q9UKA4 1901 aa10.9□□□□□ -0.67
SMKR1-202ENST00000488846 MYH13Q9UKX3 1938 aa10.9□□□□□ -0.67
SMKR1-202ENST00000488846 UQCRFS1P1P0C7P4 283 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 MCAMP43121 646 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 HDLBPQ00341 1268 aaKnown RBP10.89□□□□□ -0.67
SMKR1-202ENST00000488846 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 KIAA0825Q8IV33 1275 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 C16orf71Q8IYS4 520 aaPredicted RBP10.89□□□□□ -0.67
SMKR1-202ENST00000488846 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 GCC1Q96CN9 775 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 CCDC8Q9H0W5 538 aaPredicted RBP10.89□□□□□ -0.67
SMKR1-202ENST00000488846 IL1RAPL2Q9NP60 686 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 MYOZ2Q9NPC6 264 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 HMG20BQ9P0W2 317 aa10.89□□□□□ -0.67
SMKR1-202ENST00000488846 IGSF3O75054 1194 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 FRAT2O75474 233 aaPredicted RBP10.88□□□□□ -0.67
SMKR1-202ENST00000488846 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
SMKR1-202ENST00000488846 SCARF1Q14162 830 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 GRIK5Q16478 980 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 KIF4BQ2VIQ3 1234 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 CCDC158Q5M9N0 1113 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 GORABQ5T7V8 394 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 AACSQ86V21 672 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMKR1-202ENST00000488846 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 SERPINA10Q9UK55 444 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 HDAC9Q9UKV0 1011 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
SMKR1-202ENST00000488846 PITPNM2Q9BZ72 1349 aa10.87□□□□□ -0.67
SMKR1-202ENST00000488846 WNT10BO00744 389 aa10.87□□□□□ -0.67
SMKR1-202ENST00000488846 ITGBL1O95965 494 aaPredicted RBP10.87□□□□□ -0.67
SMKR1-202ENST00000488846 IGHDP01880 384 aa10.87□□□□□ -0.67
SMKR1-202ENST00000488846 C1QTNF8P60827 252 aa10.87□□□□□ -0.67
SMKR1-202ENST00000488846 IRX6P78412 446 aaPredicted RBP10.87□□□□□ -0.67
SMKR1-202ENST00000488846 TBC1D10BQ4KMP7 808 aaPredicted RBP10.87□□□□□ -0.67
SMKR1-202ENST00000488846 EAPPQ56P03 285 aaPredicted RBP10.87□□□□□ -0.67
SMKR1-202ENST00000488846 ZGPATQ8N5A5 531 aaKnown RBP10.87□□□□□ -0.67
SMKR1-202ENST00000488846 SPATA5Q8NB90 893 aa10.87□□□□□ -0.67
SMKR1-202ENST00000488846 RWDD1Q9H446 243 aaPredicted RBP10.87□□□□□ -0.67
SMKR1-202ENST00000488846 MAST3O60307 1309 aa10.86□□□□□ -0.67
SMKR1-202ENST00000488846 PASKQ96RG2 1323 aa10.86□□□□□ -0.67
SMKR1-202ENST00000488846 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
SMKR1-202ENST00000488846 APBB1O00213 710 aa10.86□□□□□ -0.67
SMKR1-202ENST00000488846 SMARCA5O60264 1052 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms