RNA–Protein interactions for RNA: ENST00000488359.1

WIPI2-213, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 3

Gene WIPI2, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-213ENST00000488359 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
WIPI2-213ENST00000488359 WNT10BO00744 389 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 IPO8O15397 1037 aaKnown RBP11.33□□□□□ -0.6
WIPI2-213ENST00000488359 PDE8BO95263 885 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
WIPI2-213ENST00000488359 RFX5P48382 616 aaPredicted RBP11.33□□□□□ -0.6
WIPI2-213ENST00000488359 HUNKP57058 714 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
WIPI2-213ENST00000488359 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 METTL24Q5JXM2 366 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.6
WIPI2-213ENST00000488359 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 FAM205AQ6ZU69 1335 aa11.33□□□□□ -0.6
WIPI2-213ENST00000488359 PSME4Q14997 1843 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 TRPM7Q96QT4 1865 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 FOXN1O15353 648 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 GYG1P46976 350 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
WIPI2-213ENST00000488359 GRM1Q13255 1194 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 INTS3Q68E01 1043 aaKnown RBP11.32□□□□□ -0.6
WIPI2-213ENST00000488359 FBXO33Q7Z6M2 555 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 MTMR14Q8NCE2 650 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 KLHDC4Q8TBB5 520 aa11.32□□□□□ -0.6
WIPI2-213ENST00000488359 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
WIPI2-213ENST00000488359 EYA2O00167 538 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 AOC2O75106 756 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 BCAR3O75815 825 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 FKBP1BP68106 108 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 PTPN12Q05209 780 aaKnown RBP11.31□□□□□ -0.6
WIPI2-213ENST00000488359 DLGAP5Q15398 846 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 VPS37DQ86XT2 251 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
WIPI2-213ENST00000488359 GNAI3P08754 354 aa11.3□□□□□ -0.6
WIPI2-213ENST00000488359 NOGQ13253 232 aa11.3□□□□□ -0.6
WIPI2-213ENST00000488359 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
WIPI2-213ENST00000488359 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
WIPI2-213ENST00000488359 APOBEC3FQ8IUX4 373 aaKnown RBP11.3□□□□□ -0.6
WIPI2-213ENST00000488359 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
WIPI2-213ENST00000488359 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
WIPI2-213ENST00000488359 JAG2Q9Y219 1238 aa11.3□□□□□ -0.6
WIPI2-213ENST00000488359 LRRFIP2Q9Y608 721 aaKnown RBP11.3□□□□□ -0.6
WIPI2-213ENST00000488359 F8W031 263 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-213ENST00000488359 CIAO1O76071 339 aa11.29□□□□□ -0.6
WIPI2-213ENST00000488359 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
WIPI2-213ENST00000488359 TRIM27P14373 513 aa11.29□□□□□ -0.6
WIPI2-213ENST00000488359 FGFR2P21802 821 aa11.29□□□□□ -0.6
WIPI2-213ENST00000488359 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-213ENST00000488359 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
WIPI2-213ENST00000488359 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
WIPI2-213ENST00000488359 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
WIPI2-213ENST00000488359 ATG9AQ7Z3C6 839 aa11.29□□□□□ -0.6
WIPI2-213ENST00000488359 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
WIPI2-213ENST00000488359 MEIS3Q99687 375 aa11.29□□□□□ -0.6
WIPI2-213ENST00000488359 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
WIPI2-213ENST00000488359 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
WIPI2-213ENST00000488359 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 FAM155AB1AL88 458 aaPredicted RBP11.28□□□□□ -0.6
WIPI2-213ENST00000488359 MYO1BO43795 1136 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 BCAMP50895 628 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 PRAMEF18Q5VWM3 479 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 LPIN2Q92539 896 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 PRMT6Q96LA8 375 aaPredicted RBP11.28□□□□□ -0.6
WIPI2-213ENST00000488359 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 ZBED9Q6R2W3 1325 aa11.28□□□□□ -0.6
WIPI2-213ENST00000488359 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
WIPI2-213ENST00000488359 A0A1B0GUL6 1792 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 CA12O43570 354 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 FRAT2O75474 233 aaPredicted RBP11.27□□□□□ -0.61
WIPI2-213ENST00000488359 HSPA8P11142 646 aaKnown RBP11.27□□□□□ -0.61
WIPI2-213ENST00000488359 SLC5A1P13866 664 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 NF2P35240 595 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
WIPI2-213ENST00000488359 LBX1P52954 281 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 TBC1D22AQ8WUA7 517 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 SIL1Q9H173 461 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 DEFB129Q9H1M3 183 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 CEP126Q9P2H0 1117 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 SERPINA10Q9UK55 444 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 TTF2Q9UNY4 1162 aaKnown RBP11.27□□□□□ -0.61
WIPI2-213ENST00000488359 PCDHAC2Q9Y5I4 1007 aa11.27□□□□□ -0.61
WIPI2-213ENST00000488359 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 GNAI2P04899 355 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 RBM5P52756 815 aaKnown RBP eCLIP11.26□□□□□ -0.61
WIPI2-213ENST00000488359 MTX1Q13505 466 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 ZIC5Q96T25 663 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 IQSEC3Q9UPP2 1182 aaPredicted RBP11.26□□□□□ -0.61
WIPI2-213ENST00000488359 TNNQ9UQP3 1299 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 PPP2R3BQ9Y5P8 575 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
WIPI2-213ENST00000488359 CLRN2A0PK11 232 aa11.25□□□□□ -0.61
WIPI2-213ENST00000488359 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
WIPI2-213ENST00000488359 SLC10A3P09131 477 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms