RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 PSDA5PKW4 1024 aaPredicted RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 SMAPO00193 183 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 CDC45O75419 566 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 RNF8O76064 485 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 UBE2HP62256 183 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 PABPC4Q13310 644 aaKnown RBP eCLIP7.28□□□□□ -1.24
SIK3-212ENST00000488337 PLCB4Q15147 1175 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 YTHDF3Q7Z739 585 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 CNNM3Q8NE01 707 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 MMADHCQ9H3L0 296 aaPredicted RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 ARFGAP3Q9NP61 516 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 UTP6Q9NYH9 597 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 ZC3H4Q9UPT8 1303 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 MYO1FO00160 1098 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 NPHP1O15259 732 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 EIF4BP23588 611 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 HOXA10P31260 410 aaPredicted RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 GET4Q7L5D6 327 aaPredicted RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 FAM71BQ8TC56 605 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 PPP1R13BQ96KQ4 1090 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 PDE11AQ9HCR9 933 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.28□□□□□ -1.24
SIK3-212ENST00000488337 LIN7AO14910 233 aaPredicted RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 GNAI3P08754 354 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 AARSP49588 968 aaKnown RBP eCLIP7.28□□□□□ -1.24
SIK3-212ENST00000488337 TMEM62Q0P6H9 643 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 ARID5BQ14865 1188 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 MEX3CQ5U5Q3 659 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 OGFOD1Q8N543 542 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 UBXN4Q92575 508 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 MRFAP1L1Q96HT8 127 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 RBM41Q96IZ5 413 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 ANKIB1Q9P2G1 1089 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 CORO1CQ9ULV4 474 aaPredicted RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 L1RE1Q9UN81 338 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 MAST1Q9Y2H9 1570 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 ERICH2A1L162 156 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 TMEM221A6NGB7 291 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 RDXP35241 583 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 CLNS1AP54105 237 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 ROR2Q01974 943 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 SPDL1Q96EA4 605 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 PARD6BQ9BYG5 372 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 PLEKHA4Q9H4M7 779 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 C14orf93Q9H972 538 aaKnown RBP7.28□□□□□ -1.24
SIK3-212ENST00000488337 ABCC11Q96J66 1382 aa7.28□□□□□ -1.24
SIK3-212ENST00000488337 PTPRTO14522 1441 aa7.27□□□□□ -1.24
SIK3-212ENST00000488337 A6NHS1 94 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 NAP1L1P55209 391 aaKnown RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 BRD3Q15059 726 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 LRRFIP1Q32MZ4 808 aaKnown RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 ALDH1L2Q3SY69 923 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 CACTIN-AS1Q8N1I8 211 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 ACSBG1Q96GR2 724 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 BIN2Q9UBW5 565 aaPredicted RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 DNAI1Q9UI46 699 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 MYOM2P54296 1465 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 ERVK-7P63135 1459 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 ZC3H13Q5T200 1668 aaKnown RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 PABPC1LQ4VXU2 614 aaKnown RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 AKNAD1Q5T1N1 836 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 ARHGAP22Q7Z5H3 698 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 RABGGTAQ92696 567 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 KLC4Q9NSK0 619 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 TMOD4Q9NZQ9 345 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 G3BP2Q9UN86 482 aaKnown RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 SETD1AO15047 1707 aaKnown RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 GRIN2DO15399 1336 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 BIN1O00499 593 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 MYBPC3Q14896 1274 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 GIMAP6Q6P9H5 292 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 IFNLR1Q8IU57 520 aaPredicted RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 SMCR8Q8TEV9 937 aaPredicted RBP7.27□□□□□ -1.25
SIK3-212ENST00000488337 TMEM165Q9HC07 324 aa7.27□□□□□ -1.25
SIK3-212ENST00000488337 SBNO2Q9Y2G9 1366 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 CYP11B2P19099 503 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 PRKAR2BP31323 418 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 ALS2CR12Q96Q35 445 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 DNAAF2Q9NVR5 837 aaKnown RBP7.26□□□□□ -1.25
SIK3-212ENST00000488337 SPATA7Q9P0W8 599 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 IQGAP3Q86VI3 1631 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 SASH1O94885 1247 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 LINGO3P0C6S8 592 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 FAM200BP0CF97 657 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 TMED1Q13445 227 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 HOOK2Q96ED9 719 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 API5Q9BZZ5 524 aaKnown RBP7.26□□□□□ -1.25
SIK3-212ENST00000488337 EPC1Q9H2F5 836 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 EBF2Q9HAK2 575 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 CBX8Q9HC52 389 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 BARX2Q9UMQ3 279 aaPredicted RBP7.26□□□□□ -1.25
SIK3-212ENST00000488337 UNC13BO14795 1591 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 MINK1Q8N4C8 1332 aaPredicted RBP7.26□□□□□ -1.25
SIK3-212ENST00000488337 ABCA9Q8IUA7 1624 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 NOS1P29475 1434 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 MGRN1O60291 552 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 INPP5BP32019 993 aa7.26□□□□□ -1.25
SIK3-212ENST00000488337 SNW1Q13573 536 aaKnown RBP7.26□□□□□ -1.25
SIK3-212ENST00000488337 BTG3Q14201 252 aaPredicted RBP7.26□□□□□ -1.25
SIK3-212ENST00000488337 PUS10Q3MIT2 529 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms