RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 NEFLP07196 543 aa17.75■□□□□ 0.43
GABBR1-215ENST00000488334 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
GABBR1-215ENST00000488334 SCNN1DP51172 638 aa17.75■□□□□ 0.43
GABBR1-215ENST00000488334 OGFOD1Q8N543 542 aa17.75■□□□□ 0.43
GABBR1-215ENST00000488334 ZGPATQ8N5A5 531 aaKnown RBP17.75■□□□□ 0.43
GABBR1-215ENST00000488334 GMLQ99445 158 aa17.75■□□□□ 0.43
GABBR1-215ENST00000488334 KCNQ5Q9NR82 932 aa17.75■□□□□ 0.43
GABBR1-215ENST00000488334 PSME4Q14997 1843 aa17.75■□□□□ 0.43
GABBR1-215ENST00000488334 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
GABBR1-215ENST00000488334 USP50Q70EL3 339 aaPredicted RBP17.74■□□□□ 0.43
GABBR1-215ENST00000488334 AACSQ86V21 672 aa17.74■□□□□ 0.43
GABBR1-215ENST00000488334 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
GABBR1-215ENST00000488334 ZNF526Q8TF50 670 aaPredicted RBP17.74■□□□□ 0.43
GABBR1-215ENST00000488334 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
GABBR1-215ENST00000488334 ADARB2Q9NS39 739 aaKnown RBP17.74■□□□□ 0.43
GABBR1-215ENST00000488334 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
GABBR1-215ENST00000488334 HDAC9Q9UKV0 1011 aa17.74■□□□□ 0.43
GABBR1-215ENST00000488334 ARAP2Q8WZ64 1704 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 POTECB2RU33 542 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 USP17L8P0C7I0 530 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 ARID4AP29374 1257 aaPredicted RBP17.73■□□□□ 0.43
GABBR1-215ENST00000488334 ADORA1P30542 326 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 FBXW7Q969H0 707 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 MRIQ9BWK5 157 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 TAF1DQ9H5J8 278 aaPredicted RBP17.73■□□□□ 0.43
GABBR1-215ENST00000488334 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 SCN9AQ15858 1988 aa17.73■□□□□ 0.43
GABBR1-215ENST00000488334 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
GABBR1-215ENST00000488334 EPHX2P34913 555 aa17.72■□□□□ 0.43
GABBR1-215ENST00000488334 PHKA1P46020 1223 aa17.72■□□□□ 0.43
GABBR1-215ENST00000488334 ZNF280AP59817 542 aaPredicted RBP17.72■□□□□ 0.43
GABBR1-215ENST00000488334 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
GABBR1-215ENST00000488334 TTC39AQ5SRH9 613 aa17.72■□□□□ 0.43
GABBR1-215ENST00000488334 ERICH6BQ5W0A0 696 aa17.72■□□□□ 0.43
GABBR1-215ENST00000488334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.72■□□□□ 0.43
GABBR1-215ENST00000488334 MAST3O60307 1309 aa17.72■□□□□ 0.43
GABBR1-215ENST00000488334 APBB1O00213 710 aa17.71■□□□□ 0.43
GABBR1-215ENST00000488334 SPTY2D1Q68D10 685 aaPredicted RBP17.71■□□□□ 0.43
GABBR1-215ENST00000488334 SMC5Q8IY18 1101 aa17.71■□□□□ 0.43
GABBR1-215ENST00000488334 MICALL2Q8IY33 904 aa17.71■□□□□ 0.43
GABBR1-215ENST00000488334 ZC3H15Q8WU90 426 aaKnown RBP17.71■□□□□ 0.43
GABBR1-215ENST00000488334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
GABBR1-215ENST00000488334 DBNDD2Q9BQY9 259 aa17.71■□□□□ 0.43
GABBR1-215ENST00000488334 IL1RAPL2Q9NP60 686 aa17.71■□□□□ 0.43
GABBR1-215ENST00000488334 DBNLQ9UJU6 430 aaKnown RBP17.71■□□□□ 0.43
GABBR1-215ENST00000488334 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
GABBR1-215ENST00000488334 KIF3CO14782 793 aa17.7■□□□□ 0.42
GABBR1-215ENST00000488334 TOMM70O94826 608 aa17.7■□□□□ 0.42
GABBR1-215ENST00000488334 EPS15P42566 896 aa17.7■□□□□ 0.42
GABBR1-215ENST00000488334 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
GABBR1-215ENST00000488334 HDLBPQ00341 1268 aaKnown RBP17.7■□□□□ 0.42
GABBR1-215ENST00000488334 TMED8Q6PL24 325 aaPredicted RBP17.7■□□□□ 0.42
GABBR1-215ENST00000488334 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
GABBR1-215ENST00000488334 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
GABBR1-215ENST00000488334 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
GABBR1-215ENST00000488334 RASGRF1Q13972 1273 aa17.69■□□□□ 0.42
GABBR1-215ENST00000488334 SPATA5Q8NB90 893 aa17.69■□□□□ 0.42
GABBR1-215ENST00000488334 RBM46Q8TBY0 533 aaKnown RBP17.69■□□□□ 0.42
GABBR1-215ENST00000488334 SERPINA10Q9UK55 444 aa17.69■□□□□ 0.42
GABBR1-215ENST00000488334 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
GABBR1-215ENST00000488334 MTMR14Q8NCE2 650 aa17.68■□□□□ 0.42
GABBR1-215ENST00000488334 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
GABBR1-215ENST00000488334 SLF2Q8IX21 1173 aa17.67■□□□□ 0.42
GABBR1-215ENST00000488334 CERS5Q8N5B7 392 aa17.67■□□□□ 0.42
GABBR1-215ENST00000488334 MYOZ2Q9NPC6 264 aa17.67■□□□□ 0.42
GABBR1-215ENST00000488334 HMG20BQ9P0W2 317 aa17.67■□□□□ 0.42
GABBR1-215ENST00000488334 LDHBP07195 334 aaKnown RBP17.66■□□□□ 0.42
GABBR1-215ENST00000488334 ATP5JP18859 108 aa17.66■□□□□ 0.42
GABBR1-215ENST00000488334 FSTL1Q12841 308 aa17.66■□□□□ 0.42
GABBR1-215ENST00000488334 ANKRD45Q5TZF3 282 aa17.66■□□□□ 0.42
GABBR1-215ENST00000488334 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
GABBR1-215ENST00000488334 SMC1BQ8NDV3 1235 aa17.66■□□□□ 0.42
GABBR1-215ENST00000488334 PGAP2Q9UHJ9 254 aa17.66■□□□□ 0.42
GABBR1-215ENST00000488334 TTF2Q9UNY4 1162 aaKnown RBP17.66■□□□□ 0.42
GABBR1-215ENST00000488334 IGHDP01880 384 aa17.65■□□□□ 0.42
GABBR1-215ENST00000488334 MCAMP43121 646 aa17.65■□□□□ 0.42
GABBR1-215ENST00000488334 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
GABBR1-215ENST00000488334 KIF4BQ2VIQ3 1234 aa17.65■□□□□ 0.42
GABBR1-215ENST00000488334 HHIPL2Q6UWX4 724 aa17.65■□□□□ 0.42
GABBR1-215ENST00000488334 MXD3Q9BW11 206 aa17.65■□□□□ 0.42
GABBR1-215ENST00000488334 ECHDC1Q9NTX5 307 aa17.65■□□□□ 0.42
GABBR1-215ENST00000488334 TLR7Q9NYK1 1049 aaKnown RBP17.65■□□□□ 0.42
GABBR1-215ENST00000488334 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
GABBR1-215ENST00000488334 ZNF646O15015 1829 aaPredicted RBP17.64■□□□□ 0.41
GABBR1-215ENST00000488334 ERC2O15083 957 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 MYO1BO43795 1136 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 DLGAP5Q15398 846 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
GABBR1-215ENST00000488334 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 TEKT1Q969V4 418 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 JAG2Q9Y219 1238 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 MYH13Q9UKX3 1938 aa17.64■□□□□ 0.41
GABBR1-215ENST00000488334 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
GABBR1-215ENST00000488334 GSTO1P78417 241 aa17.63■□□□□ 0.41
GABBR1-215ENST00000488334 NUCB1Q02818 461 aa17.63■□□□□ 0.41
GABBR1-215ENST00000488334 SAMD7Q7Z3H4 446 aa17.63■□□□□ 0.41
GABBR1-215ENST00000488334 ABCF2Q9UG63 623 aa17.63■□□□□ 0.41
GABBR1-215ENST00000488334 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
GABBR1-215ENST00000488334 PITPNM2Q9BZ72 1349 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms