RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PTMAP06454 111 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 NAA30Q147X3 362 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 MTFR1Q15390 333 aa5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 MCTP1Q6DN14 999 aa5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 FOXR1Q6PIV2 292 aa5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 AGBL1Q96MI9 1066 aa5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 POLMQ9NP87 494 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 RAD54L2Q9Y4B4 1467 aa5.73□□□□□ -1.49
CDC42BPA-213ENST00000488131 CFAP65Q6ZU64 1925 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 UNC13BO14795 1591 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 POLR3AO14802 1390 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 RAD50Q92878 1312 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 A6NJY4 79 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 BACH1O14867 736 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 ADH1AP07327 375 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 CT47B1P0C2W7 299 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 BAG6P46379 1132 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 SMTNP53814 917 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 SRSF11Q05519 484 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 CHAF1AQ13111 956 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 RABEP1Q15276 862 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 DNAJC14Q6Y2X3 702 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 BEND7Q8N7W2 519 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 GMCL1Q96IK5 515 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 TSPY26PQ9H489 355 aa5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 SCHIP1Q9P0W5 487 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 IQSEC3Q9UPP2 1182 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-213ENST00000488131 KDM5AP29375 1690 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-213ENST00000488131 MADDQ8WXG6 1647 aa5.71□□□□□ -1.49
CDC42BPA-213ENST00000488131 MED14O60244 1454 aa5.71□□□□□ -1.49
CDC42BPA-213ENST00000488131 SYCE3A1L190 88 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 ICMTO60725 284 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 TPM3P06753 285 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 NUCB1Q02818 461 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 RNFT1Q5M7Z0 435 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 SLC9A9Q8IVB4 645 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 KIAA1524Q8TCG1 905 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 CNKSR1Q969H4 720 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 SAP130Q9H0E3 1048 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 NUP155O75694 1391 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 ADAMTS2O95450 1211 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 PODNQ7Z5L7 613 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 WDR63Q8IWG1 891 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZNF295-AS1Q8N0V1 137 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 KRT222Q8N1A0 295 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 KIF18AQ8NI77 898 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 CHMP7Q8WUX9 453 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 SYAP1Q96A49 352 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 ESYT1Q9BSJ8 1104 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 FHDC1Q9C0D6 1143 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 EGFL7Q9UHF1 273 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 FEZ2Q9UHY8 353 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 KNSTRNQ9Y448 316 aa5.71□□□□□ -1.5
CDC42BPA-213ENST00000488131 ARHGEF5Q12774 1597 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 TTC37Q6PGP7 1564 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 GPATCH8Q9UKJ3 1502 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 NUP153P49790 1475 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 MYOM2P54296 1465 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 TROQ12816 1431 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 H3BRB1 525 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 FOXO3O43524 673 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 IGSF3O75054 1194 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 PTGIRP43119 386 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 RELBQ01201 579 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 ESCO1Q5FWF5 840 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 AXDND1Q5T1B0 1012 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 SH3PXD2AQ5TCZ1 1133 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 CCDC146Q8IYE0 955 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 COL26A1Q96A83 441 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 C2orf49Q9BVC5 232 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 TUT1Q9H6E5 874 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 USP32Q8NFA0 1604 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 RAPGEF6Q8TEU7 1601 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 DUOX2Q9NRD8 1548 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 FANCD2Q9BXW9 1451 aa5.7□□□□□ -1.5
CDC42BPA-213ENST00000488131 NOS1P29475 1434 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZNF644Q9H582 1327 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 SMTNL1A8MU46 457 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 CLGNO14967 610 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 PRPF40AO75400 957 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 ARHGAP4P98171 946 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 CENPCQ03188 943 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 CLN3Q13286 438 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 MUM1L1Q5H9M0 696 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZKSCAN2Q63HK3 967 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 CTR9Q6PD62 1173 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZDHHC1Q8WTX9 485 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZNF395Q9H8N7 513 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 DDX19BQ9UMR2 479 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 TNNQ9UQP3 1299 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZDHHC9Q9Y397 364 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 PLA2R1Q13018 1463 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 C9orf84Q5VXU9 1444 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 IQGAP3Q86VI3 1631 aa5.69□□□□□ -1.5
CDC42BPA-213ENST00000488131 FAM177BA6PVY3 158 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 PPP1R12BO60237 982 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 PTCD1O75127 700 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 REC8O95072 547 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 CYP2C19P33261 490 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 CTSOP43234 321 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms