RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 STRIP1Q5VSL9 837 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 PI16Q6UXB8 463 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 SAMD7Q7Z3H4 446 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 MICALL2Q8IY33 904 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 HACL1Q9UJ83 578 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 DBNLQ9UJU6 430 aaKnown RBP21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 PCDHAC2Q9Y5I4 1007 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 ZNF646O15015 1829 aaPredicted RBP21.15■□□□□ 0.98
SHROOM1-205ENST00000488072 HIRAP54198 1017 aaPredicted RBP21.15■□□□□ 0.98
SHROOM1-205ENST00000488072 EAPPQ56P03 285 aaPredicted RBP21.15■□□□□ 0.98
SHROOM1-205ENST00000488072 DCTPP1Q9H773 170 aa21.15■□□□□ 0.98
SHROOM1-205ENST00000488072 AKAP2Q9Y2D5 859 aa21.15■□□□□ 0.98
SHROOM1-205ENST00000488072 ASTN2O75129 1339 aaPredicted RBP21.14■□□□□ 0.97
SHROOM1-205ENST00000488072 TBC1D10BQ4KMP7 808 aaPredicted RBP21.14■□□□□ 0.97
SHROOM1-205ENST00000488072 AACSQ86V21 672 aa21.14■□□□□ 0.97
SHROOM1-205ENST00000488072 KIAA0825Q8IV33 1275 aa21.14■□□□□ 0.97
SHROOM1-205ENST00000488072 FAM205AQ6ZU69 1335 aa21.13■□□□□ 0.97
SHROOM1-205ENST00000488072 GPR108Q9NPR9 543 aa21.13■□□□□ 0.97
SHROOM1-205ENST00000488072 AOX1Q06278 1338 aa21.12■□□□□ 0.97
SHROOM1-205ENST00000488072 FRAT2O75474 233 aaPredicted RBP21.12■□□□□ 0.97
SHROOM1-205ENST00000488072 LMOD1P29536 600 aaPredicted RBP21.12■□□□□ 0.97
SHROOM1-205ENST00000488072 RASGRF1Q13972 1273 aa21.12■□□□□ 0.97
SHROOM1-205ENST00000488072 DLK2Q6UY11 383 aa21.12■□□□□ 0.97
SHROOM1-205ENST00000488072 SNRKQ9NRH2 765 aa21.12■□□□□ 0.97
SHROOM1-205ENST00000488072 NDUFB9Q9Y6M9 179 aa21.12■□□□□ 0.97
SHROOM1-205ENST00000488072 MFSD14BQ5SR56 506 aa21.11■□□□□ 0.97
SHROOM1-205ENST00000488072 ERC1Q8IUD2 1116 aa21.11■□□□□ 0.97
SHROOM1-205ENST00000488072 C16orf71Q8IYS4 520 aaPredicted RBP21.11■□□□□ 0.97
SHROOM1-205ENST00000488072 DPF2Q92785 391 aa21.11■□□□□ 0.97
SHROOM1-205ENST00000488072 KIF1BPQ96EK5 621 aa21.11■□□□□ 0.97
SHROOM1-205ENST00000488072 SCAF8Q9UPN6 1271 aaKnown RBP21.11■□□□□ 0.97
SHROOM1-205ENST00000488072 RAB11FIP3O75154 756 aa21.1■□□□□ 0.97
SHROOM1-205ENST00000488072 HSP90AB4PQ58FF6 505 aa21.1■□□□□ 0.97
SHROOM1-205ENST00000488072 GORABQ5T7V8 394 aa21.1■□□□□ 0.97
SHROOM1-205ENST00000488072 AGBL3Q8NEM8 1001 aa21.1■□□□□ 0.97
SHROOM1-205ENST00000488072 OTUD7AQ8TE49 926 aaPredicted RBP21.1■□□□□ 0.97
SHROOM1-205ENST00000488072 HMG20BQ9P0W2 317 aa21.1■□□□□ 0.97
SHROOM1-205ENST00000488072 ARAP2Q8WZ64 1704 aa21.09■□□□□ 0.97
SHROOM1-205ENST00000488072 IQCA1LA6NCM1 817 aa21.09■□□□□ 0.97
SHROOM1-205ENST00000488072 USP17L8P0C7I0 530 aa21.09■□□□□ 0.97
SHROOM1-205ENST00000488072 RPS12P25398 132 aaKnown RBP21.09■□□□□ 0.97
SHROOM1-205ENST00000488072 MCAMP43121 646 aa21.09■□□□□ 0.97
SHROOM1-205ENST00000488072 FMR1Q06787 632 aaKnown RBP eCLIP21.09■□□□□ 0.97
SHROOM1-205ENST00000488072 TBC1D9Q6ZT07 1266 aa21.09■□□□□ 0.97
SHROOM1-205ENST00000488072 PSME4Q14997 1843 aa21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 ZNF280AP59817 542 aaPredicted RBP21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 TTC39AQ5SRH9 613 aa21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 TSHZ3Q63HK5 1081 aa21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 LRRCC1Q9C099 1032 aa21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 ADARB2Q9NS39 739 aaKnown RBP21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 CLEC11AQ9Y240 323 aa21.08■□□□□ 0.97
SHROOM1-205ENST00000488072 H7C1D1 291 aa21.07■□□□□ 0.96
SHROOM1-205ENST00000488072 MAP1SQ66K74 1059 aaPredicted RBP21.07■□□□□ 0.96
SHROOM1-205ENST00000488072 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
SHROOM1-205ENST00000488072 ARID4AP29374 1257 aaPredicted RBP21.06■□□□□ 0.96
SHROOM1-205ENST00000488072 NBPF9Q3BBW0 867 aa21.06■□□□□ 0.96
SHROOM1-205ENST00000488072 CLASRPQ8N2M8 674 aaKnown RBP21.06■□□□□ 0.96
SHROOM1-205ENST00000488072 MYOZ2Q9NPC6 264 aa21.06■□□□□ 0.96
SHROOM1-205ENST00000488072 GNL3LQ9NVN8 582 aaKnown RBP21.06■□□□□ 0.96
SHROOM1-205ENST00000488072 TTF2Q9UNY4 1162 aaKnown RBP21.06■□□□□ 0.96
SHROOM1-205ENST00000488072 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
SHROOM1-205ENST00000488072 PRDX5P30044 214 aa21.05■□□□□ 0.96
SHROOM1-205ENST00000488072 ZAP70P43403 619 aa21.05■□□□□ 0.96
SHROOM1-205ENST00000488072 KIF4BQ2VIQ3 1234 aa21.05■□□□□ 0.96
SHROOM1-205ENST00000488072 DENND2AQ9ULE3 1009 aa21.05■□□□□ 0.96
SHROOM1-205ENST00000488072 SCN4AP35499 1836 aa21.04■□□□□ 0.96
SHROOM1-205ENST00000488072 TOMM70O94826 608 aa21.04■□□□□ 0.96
SHROOM1-205ENST00000488072 IFIT2P09913 472 aaKnown RBP21.04■□□□□ 0.96
SHROOM1-205ENST00000488072 ANKRD45Q5TZF3 282 aa21.04■□□□□ 0.96
SHROOM1-205ENST00000488072 SPATA5Q8NB90 893 aa21.04■□□□□ 0.96
SHROOM1-205ENST00000488072 ADAMTSL1Q8N6G6 1762 aa21.04■□□□□ 0.96
SHROOM1-205ENST00000488072 FKBP1AP62942 108 aaKnown RBP21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 DIXDC1Q155Q3 683 aa21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 CFAP100Q494V2 611 aa21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 CCDC158Q5M9N0 1113 aa21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 USP50Q70EL3 339 aaPredicted RBP21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 EDC3Q96F86 508 aaKnown RBP21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 ANTXR1Q9H6X2 564 aa21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 ABCF2Q9UG63 623 aa21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 MYO3BQ8WXR4 1341 aa21.03■□□□□ 0.96
SHROOM1-205ENST00000488072 TRAF5O00463 557 aa21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 CYP2E1P05181 493 aaPredicted RBP21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 AAMPQ13685 434 aa21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 CHADLQ6NUI6 762 aa21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 LDHDQ86WU2 507 aa21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 WDR66Q8TBY9 1149 aa21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 ZNF384Q8TF68 577 aa21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 ZBED3Q96IU2 234 aaPredicted RBP21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 PRMT6Q96LA8 375 aaPredicted RBP21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 RWDD1Q9H446 243 aaPredicted RBP21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 PIH1D3Q9NQM4 214 aaKnown RBP21.02■□□□□ 0.96
SHROOM1-205ENST00000488072 WNT10BO00744 389 aa21.01■□□□□ 0.95
SHROOM1-205ENST00000488072 SEMA3EO15041 775 aa21.01■□□□□ 0.95
SHROOM1-205ENST00000488072 UQCRFS1P1P0C7P4 283 aa21.01■□□□□ 0.95
SHROOM1-205ENST00000488072 PNMA8AQ86V59 439 aaPredicted RBP21.01■□□□□ 0.95
SHROOM1-205ENST00000488072 SMC5Q8IY18 1101 aa21.01■□□□□ 0.95
SHROOM1-205ENST00000488072 RBM46Q8TBY0 533 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-205ENST00000488072 GLIS2Q9BZE0 524 aaPredicted RBP21.01■□□□□ 0.95
SHROOM1-205ENST00000488072 CRKP46108 304 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms