RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 HSPA1AP0DMV8 641 aaKnown RBP29.57■■■□□ 2.32
RNF38-208ENST00000488058 HSPA1BP0DMV9 641 aaKnown RBP29.57■■■□□ 2.32
RNF38-208ENST00000488058 PUM3Q15397 648 aaKnown RBP29.57■■■□□ 2.32
RNF38-208ENST00000488058 TDRD7Q8NHU6 1098 aaKnown RBP29.57■■■□□ 2.32
RNF38-208ENST00000488058 SCAF8Q9UPN6 1271 aaKnown RBP29.57■■■□□ 2.32
RNF38-208ENST00000488058 PA2G4Q9UQ80 394 aaKnown RBP29.57■■■□□ 2.32
RNF38-208ENST00000488058 WDR33Q9C0J8 1336 aaKnown RBP29.56■■■□□ 2.32
RNF38-208ENST00000488058 WNT10BO00744 389 aa29.56■■■□□ 2.32
RNF38-208ENST00000488058 CYP4F22Q6NT55 531 aa29.56■■■□□ 2.32
RNF38-208ENST00000488058 FTSJ3Q8IY81 847 aaKnown RBP29.56■■■□□ 2.32
RNF38-208ENST00000488058 FRAT2O75474 233 aaPredicted RBP29.55■■■□□ 2.32
RNF38-208ENST00000488058 IFIT1P09914 478 aaKnown RBP29.55■■■□□ 2.32
RNF38-208ENST00000488058 MMP14P50281 582 aa29.55■■■□□ 2.32
RNF38-208ENST00000488058 ATG9AQ7Z3C6 839 aa29.55■■■□□ 2.32
RNF38-208ENST00000488058 SAPCD2Q86UD0 394 aa29.55■■■□□ 2.32
RNF38-208ENST00000488058 CDCA5Q96FF9 252 aa29.55■■■□□ 2.32
RNF38-208ENST00000488058 CAPNS2Q96L46 248 aa29.55■■■□□ 2.32
RNF38-208ENST00000488058 PITPNM2Q9BZ72 1349 aa29.54■■■□□ 2.32
RNF38-208ENST00000488058 FKBP1AP62942 108 aaKnown RBP29.54■■■□□ 2.32
RNF38-208ENST00000488058 FAM205AQ6ZU69 1335 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 SRGAP3O43295 1099 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 CIAO1O76071 339 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 GNAI2P04899 355 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 SLC5A1P13866 664 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 ECE1P42892 770 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 CHAF1AQ13111 956 aaPredicted RBP29.53■■■□□ 2.32
RNF38-208ENST00000488058 DLGAP5Q15398 846 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 MFSD14BQ5SR56 506 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 FBXO33Q7Z6M2 555 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 FBXO3Q9UK99 471 aa29.53■■■□□ 2.32
RNF38-208ENST00000488058 FGFR2P21802 821 aa29.52■■■□□ 2.32
RNF38-208ENST00000488058 BCAMP50895 628 aa29.52■■■□□ 2.32
RNF38-208ENST00000488058 DZIP1LQ8IYY4 767 aaKnown RBP29.52■■■□□ 2.32
RNF38-208ENST00000488058 C2orf69Q8N8R5 385 aa29.52■■■□□ 2.32
RNF38-208ENST00000488058 GBA2Q9HCG7 927 aaPredicted RBP29.52■■■□□ 2.32
RNF38-208ENST00000488058 CEP126Q9P2H0 1117 aa29.52■■■□□ 2.32
RNF38-208ENST00000488058 ARAP2Q8WZ64 1704 aa29.51■■■□□ 2.31
RNF38-208ENST00000488058 IL15P40933 162 aaPredicted RBP29.5■■■□□ 2.31
RNF38-208ENST00000488058 HUNKP57058 714 aa29.5■■■□□ 2.31
RNF38-208ENST00000488058 ITPRIPQ8IWB1 547 aa29.5■■■□□ 2.31
RNF38-208ENST00000488058 LPIN2Q92539 896 aa29.5■■■□□ 2.31
RNF38-208ENST00000488058 COPRSQ9NQ92 184 aa29.5■■■□□ 2.31
RNF38-208ENST00000488058 RBM5P52756 815 aaKnown RBP eCLIP29.49■■■□□ 2.31
RNF38-208ENST00000488058 ATP2B3Q16720 1220 aa29.49■■■□□ 2.31
RNF38-208ENST00000488058 CFAP100Q494V2 611 aa29.49■■■□□ 2.31
RNF38-208ENST00000488058 PCDHAC2Q9Y5I4 1007 aa29.49■■■□□ 2.31
RNF38-208ENST00000488058 MYH13Q9UKX3 1938 aa29.48■■■□□ 2.31
RNF38-208ENST00000488058 PRAMEF18Q5VWM3 479 aa29.48■■■□□ 2.31
RNF38-208ENST00000488058 TTF2Q9UNY4 1162 aaKnown RBP29.48■■■□□ 2.31
RNF38-208ENST00000488058 RLBP1P12271 317 aa29.47■■■□□ 2.31
RNF38-208ENST00000488058 MTX1Q13505 466 aa29.47■■■□□ 2.31
RNF38-208ENST00000488058 ZBED3Q96IU2 234 aaPredicted RBP29.47■■■□□ 2.31
RNF38-208ENST00000488058 ECM29Q5VYK3 1845 aa29.47■■■□□ 2.31
RNF38-208ENST00000488058 APOBEC3FQ8IUX4 373 aaKnown RBP29.46■■■□□ 2.31
RNF38-208ENST00000488058 AIDAQ96BJ3 306 aa29.46■■■□□ 2.31
RNF38-208ENST00000488058 HHIPL1Q96JK4 782 aa29.46■■■□□ 2.31
RNF38-208ENST00000488058 AOC2O75106 756 aa29.45■■■□□ 2.31
RNF38-208ENST00000488058 MYO1BO43795 1136 aa29.44■■■□□ 2.3
RNF38-208ENST00000488058 MTMR14Q8NCE2 650 aa29.44■■■□□ 2.3
RNF38-208ENST00000488058 TBC1D22AQ8WUA7 517 aa29.44■■■□□ 2.3
RNF38-208ENST00000488058 C1orf115Q9H7X2 142 aa29.44■■■□□ 2.3
RNF38-208ENST00000488058 THSD7BQ9C0I4 1608 aa29.44■■■□□ 2.3
RNF38-208ENST00000488058 PNMA6EA0A0J9YXQ4 647 aa29.43■■■□□ 2.3
RNF38-208ENST00000488058 CLRN2A0PK11 232 aa29.43■■■□□ 2.3
RNF38-208ENST00000488058 SPDYE2BA6NHP3 402 aa29.43■■■□□ 2.3
RNF38-208ENST00000488058 SPDYE6P0CI01 402 aa29.43■■■□□ 2.3
RNF38-208ENST00000488058 PRMT6Q96LA8 375 aaPredicted RBP29.43■■■□□ 2.3
RNF38-208ENST00000488058 GRIK5Q16478 980 aa29.42■■■□□ 2.3
RNF38-208ENST00000488058 RGMBQ6NW40 437 aa29.42■■■□□ 2.3
RNF38-208ENST00000488058 VEZTQ9HBM0 779 aa29.42■■■□□ 2.3
RNF38-208ENST00000488058 FOXN1O15353 648 aa29.41■■■□□ 2.3
RNF38-208ENST00000488058 NF2P35240 595 aa29.41■■■□□ 2.3
RNF38-208ENST00000488058 MAP2K1Q02750 393 aaPredicted RBP29.41■■■□□ 2.3
RNF38-208ENST00000488058 TTLL12Q14166 644 aaPredicted RBP29.41■■■□□ 2.3
RNF38-208ENST00000488058 PANK1Q8TE04 598 aa29.41■■■□□ 2.3
RNF38-208ENST00000488058 WBP1LQ9NX94 342 aa29.41■■■□□ 2.3
RNF38-208ENST00000488058 PAPPA2Q9BXP8 1791 aa29.41■■■□□ 2.3
RNF38-208ENST00000488058 TFCP2Q12800 502 aa29.4■■■□□ 2.3
RNF38-208ENST00000488058 SERPINA10Q9UK55 444 aa29.4■■■□□ 2.3
RNF38-208ENST00000488058 AOX1Q06278 1338 aa29.4■■■□□ 2.3
RNF38-208ENST00000488058 ZNF157P51786 506 aaPredicted RBP29.39■■■□□ 2.3
RNF38-208ENST00000488058 MOB2Q70IA6 237 aa29.39■■■□□ 2.3
RNF38-208ENST00000488058 GNL3LQ9NVN8 582 aaKnown RBP29.39■■■□□ 2.3
RNF38-208ENST00000488058 ADORA1P30542 326 aa29.38■■■□□ 2.29
RNF38-208ENST00000488058 MAP2K2P36507 400 aa29.38■■■□□ 2.29
RNF38-208ENST00000488058 CRKP46108 304 aa29.38■■■□□ 2.29
RNF38-208ENST00000488058 G3BP1Q13283 466 aaKnown RBP eCLIP29.38■■■□□ 2.29
RNF38-208ENST00000488058 RCAN3Q9UKA8 241 aa29.38■■■□□ 2.29
RNF38-208ENST00000488058 ZBTB7BO15156 539 aaPredicted RBP29.37■■■□□ 2.29
RNF38-208ENST00000488058 PHKA1P46020 1223 aa29.37■■■□□ 2.29
RNF38-208ENST00000488058 TIMM10P62072 90 aa29.37■■■□□ 2.29
RNF38-208ENST00000488058 FKBP1BP68106 108 aa29.37■■■□□ 2.29
RNF38-208ENST00000488058 PRKG1Q13976 671 aa29.37■■■□□ 2.29
RNF38-208ENST00000488058 BEGAINQ9BUH8 593 aa29.37■■■□□ 2.29
RNF38-208ENST00000488058 DEFB129Q9H1M3 183 aa29.37■■■□□ 2.29
RNF38-208ENST00000488058 TDRD3Q9H7E2 651 aaKnown RBP29.37■■■□□ 2.29
RNF38-208ENST00000488058 AKAP2Q9Y2D5 859 aa29.37■■■□□ 2.29
RNF38-208ENST00000488058 COL1A1P02452 1464 aaPredicted RBP29.36■■■□□ 2.29
RNF38-208ENST00000488058 A0A1B0GUL7 405 aa29.36■■■□□ 2.29
RNF38-208ENST00000488058 WDR66Q8TBY9 1149 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms