RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 SERPINB4P48594 390 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 NKAPLQ5M9Q1 402 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 B4GALNT3Q6L9W6 998 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 BIVM-ERCC5R4GMW8 1640 aa8.39□□□□□ -1.07
BRCA1-217ENST00000487825 TRPA1O75762 1119 aa8.38□□□□□ -1.07
BRCA1-217ENST00000487825 ITGB7P26010 798 aa8.38□□□□□ -1.07
BRCA1-217ENST00000487825 NOS3P29474 1203 aa8.38□□□□□ -1.07
BRCA1-217ENST00000487825 CACTIN-AS1Q8N1I8 211 aa8.38□□□□□ -1.07
BRCA1-217ENST00000487825 POP1Q99575 1024 aaKnown RBP8.38□□□□□ -1.07
BRCA1-217ENST00000487825 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
BRCA1-217ENST00000487825 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
BRCA1-217ENST00000487825 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-217ENST00000487825 SALL4Q9UJQ4 1053 aa8.38□□□□□ -1.07
BRCA1-217ENST00000487825 EPRSP07814 1512 aaKnown RBP8.38□□□□□ -1.07
BRCA1-217ENST00000487825 TP53INP1Q96A56 240 aa8.37□□□□□ -1.07
BRCA1-217ENST00000487825 FOXD3Q9UJU5 478 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-217ENST00000487825 H3BRB1 525 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 EREGO14944 169 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 DYRK3O43781 588 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 ICMTO60725 284 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 PHACTR2O75167 634 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 TNFRSF21O75509 655 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 ALX3O95076 343 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 USP5P45974 858 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 GALNT11Q8NCW6 608 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 PMEPA1Q969W9 287 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 TUT1Q9H6E5 874 aaKnown RBP8.36□□□□□ -1.07
BRCA1-217ENST00000487825 SRA1Q9HD15 236 aaKnown RBP8.36□□□□□ -1.07
BRCA1-217ENST00000487825 BCORL1Q5H9F3 1711 aa8.36□□□□□ -1.07
BRCA1-217ENST00000487825 WRNQ14191 1432 aaPredicted RBP eCLIP8.36□□□□□ -1.07
BRCA1-217ENST00000487825 CFAP43Q8NDM7 1665 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 PTPRAP18433 802 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 EPHA1P21709 976 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 MAP4K3Q8IVH8 894 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 GLYCTKQ8IVS8 523 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 HHIPQ96QV1 700 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
BRCA1-217ENST00000487825 AKTIPQ9H8T0 292 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 DZANK1Q9NVP4 752 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 EGFL7Q9UHF1 273 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 ZCCHC11Q5TAX3 1644 aaKnown RBP8.35□□□□□ -1.07
BRCA1-217ENST00000487825 MADDQ8WXG6 1647 aa8.35□□□□□ -1.07
BRCA1-217ENST00000487825 UHRF1BP1LA0JNW5 1464 aa8.34□□□□□ -1.07
BRCA1-217ENST00000487825 EHHADHQ08426 723 aa8.34□□□□□ -1.07
BRCA1-217ENST00000487825 GJD3Q8N144 294 aa8.34□□□□□ -1.07
BRCA1-217ENST00000487825 SNX29Q8TEQ0 813 aa8.34□□□□□ -1.07
BRCA1-217ENST00000487825 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-217ENST00000487825 NFKBIEO00221 500 aa8.33□□□□□ -1.08
BRCA1-217ENST00000487825 PDE2AO00408 941 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-217ENST00000487825 FSCN2O14926 492 aa8.33□□□□□ -1.08
BRCA1-217ENST00000487825 FAM117BQ6P1L5 589 aa8.33□□□□□ -1.08
BRCA1-217ENST00000487825 MEGF10Q96KG7 1140 aa8.33□□□□□ -1.08
BRCA1-217ENST00000487825 KCNK4Q9NYG8 393 aa8.33□□□□□ -1.08
BRCA1-217ENST00000487825 F8W735 103 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-217ENST00000487825 CD68P34810 354 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-217ENST00000487825 ECM1Q16610 540 aa8.32□□□□□ -1.08
BRCA1-217ENST00000487825 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-217ENST00000487825 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-217ENST00000487825 AGGF1Q8N302 714 aaeCLIP8.32□□□□□ -1.08
BRCA1-217ENST00000487825 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
BRCA1-217ENST00000487825 OSMRQ99650 979 aa8.32□□□□□ -1.08
BRCA1-217ENST00000487825 ZKSCAN3Q9BRR0 538 aa8.32□□□□□ -1.08
BRCA1-217ENST00000487825 ADAM19Q9H013 955 aa8.32□□□□□ -1.08
BRCA1-217ENST00000487825 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
BRCA1-217ENST00000487825 RIMS1Q86UR5 1692 aaKnown RBP8.31□□□□□ -1.08
BRCA1-217ENST00000487825 PTPRGP23470 1445 aa8.31□□□□□ -1.08
BRCA1-217ENST00000487825 KDM5BQ9UGL1 1544 aa8.31□□□□□ -1.08
BRCA1-217ENST00000487825 DDX3YO15523 660 aaKnown RBP8.31□□□□□ -1.08
BRCA1-217ENST00000487825 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
BRCA1-217ENST00000487825 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
BRCA1-217ENST00000487825 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
BRCA1-217ENST00000487825 TMEM130Q8N3G9 435 aa8.31□□□□□ -1.08
BRCA1-217ENST00000487825 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
BRCA1-217ENST00000487825 MAGI3Q5TCQ9 1506 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 WISP1O95388 367 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-217ENST00000487825 EDN3P14138 238 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 CABP4P57796 275 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 ARHGAP4P98171 946 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 NXPE3Q969Y0 559 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 KLHDC7BQ96G42 594 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 ZFYVE28Q9HCC9 887 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 AMOTL2Q9Y2J4 779 aa8.3□□□□□ -1.08
BRCA1-217ENST00000487825 H3BRJ5 948 aa8.29□□□□□ -1.08
BRCA1-217ENST00000487825 GLB1P16278 677 aa8.29□□□□□ -1.08
BRCA1-217ENST00000487825 PDE4CQ08493 712 aa8.29□□□□□ -1.08
BRCA1-217ENST00000487825 ZMYM1Q5SVZ6 1142 aa8.29□□□□□ -1.08
BRCA1-217ENST00000487825 TXNDC2Q86VQ3 553 aa8.29□□□□□ -1.08
BRCA1-217ENST00000487825 TMEM102Q8N9M5 508 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-217ENST00000487825 SLC7A3Q8WY07 619 aa8.29□□□□□ -1.08
BRCA1-217ENST00000487825 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
BRCA1-217ENST00000487825 TM4SF5O14894 197 aa8.28□□□□□ -1.08
BRCA1-217ENST00000487825 ACAD11Q709F0 780 aa8.28□□□□□ -1.08
BRCA1-217ENST00000487825 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.28□□□□□ -1.08
BRCA1-217ENST00000487825 DZIP1LQ8IYY4 767 aaKnown RBP8.28□□□□□ -1.08
BRCA1-217ENST00000487825 KLHL23Q8NBE8 558 aa8.28□□□□□ -1.08
BRCA1-217ENST00000487825 ASAP3Q8TDY4 903 aa8.28□□□□□ -1.08
BRCA1-217ENST00000487825 NDUFB5O43674 189 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms