RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CES1P23141 567 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 ARL4DP49703 201 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 C19orf57Q0VDD7 668 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 NUTM2GQ5VZR2 741 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 OGFOD2Q6N063 350 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 C1orf127Q8N9H9 656 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 C12orf50Q8NA57 414 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 CCDC97Q96F63 343 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 DZANK1Q9NVP4 752 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 SALL4Q9UJQ4 1053 aa7.16□□□□□ -1.26
HMGB1P36-201ENST00000487709 NFKBIEO00221 500 aa7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 FOSL1P15407 271 aa7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 ELOAQ14241 798 aaKnown RBP7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 MSMPQ1L6U9 139 aa7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 SHISA5Q8N114 240 aa7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 CCDC39Q9UFE4 941 aa7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 SOX13Q9UN79 622 aa7.15□□□□□ -1.26
HMGB1P36-201ENST00000487709 A6NHS1 94 aa7.14□□□□□ -1.27
HMGB1P36-201ENST00000487709 NFKBIBQ15653 356 aa7.14□□□□□ -1.27
HMGB1P36-201ENST00000487709 TMEM164Q5U3C3 297 aa7.14□□□□□ -1.27
HMGB1P36-201ENST00000487709 TP53INP2Q8IXH6 220 aa7.14□□□□□ -1.27
HMGB1P36-201ENST00000487709 FAM95CA0A1B0GW59 222 aa7.13□□□□□ -1.27
HMGB1P36-201ENST00000487709 MEGF11A6BM72 1044 aa7.13□□□□□ -1.27
HMGB1P36-201ENST00000487709 EDEM1Q92611 657 aa7.13□□□□□ -1.27
HMGB1P36-201ENST00000487709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 SOX1O00570 391 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 DRD2P14416 443 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 USP11P51784 963 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 JAG1P78504 1218 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 DNM1Q05193 864 aaKnown RBP7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 IKBKEQ14164 716 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 C8orf34Q49A92 452 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 VSIG10LQ86VR7 867 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 FBLIM1Q8WUP2 373 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 TMPRSS13Q9BYE2 586 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 CYP4F12Q9HCS2 524 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 SEPT3Q9UH03 358 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
HMGB1P36-201ENST00000487709 LOC100289279A0A1B0GTE1 492 aa7.11□□□□□ -1.27
HMGB1P36-201ENST00000487709 TIAF1O95411 115 aa7.11□□□□□ -1.27
HMGB1P36-201ENST00000487709 CDPF1Q6NVV7 123 aa7.11□□□□□ -1.27
HMGB1P36-201ENST00000487709 NFXL1Q6ZNB6 911 aa7.11□□□□□ -1.27
HMGB1P36-201ENST00000487709 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
HMGB1P36-201ENST00000487709 FBXL18Q96ME1 805 aa7.11□□□□□ -1.27
HMGB1P36-201ENST00000487709 ARID1BQ8NFD5 2236 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P36-201ENST00000487709 ARID3CA6NKF2 412 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 CYP26A1O43174 497 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 DLGAP3O95886 979 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 CPSF6Q16630 551 aaKnown RBP eCLIP7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 VN1R5Q7Z5H4 357 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 TMEM102Q8N9M5 508 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 TTC16Q8NEE8 873 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 FLCNQ8NFG4 579 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 BSNDQ8WZ55 320 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 TBC1D32Q96NH3 1257 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 OSMRQ99650 979 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 ZKSCAN3Q9BRR0 538 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 METTL22Q9BUU2 404 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 CHRDQ9H2X0 955 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 GGNBP2Q9H3C7 697 aa7.1□□□□□ -1.27
HMGB1P36-201ENST00000487709 PRNPP04156 253 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 RPLP1P05386 114 aaKnown RBP7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 C8AP07357 584 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 PCSK2P16519 638 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 ADMP35318 185 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 CBLL1Q75N03 491 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 ASAP3Q8TDY4 903 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 ASIC4Q96FT7 647 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 ARID3AQ99856 593 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 SUGCTQ9HAC7 445 aa7.09□□□□□ -1.27
HMGB1P36-201ENST00000487709 FAM170BA6NMN3 283 aa7.08□□□□□ -1.28
HMGB1P36-201ENST00000487709 PDGFAP04085 211 aa7.08□□□□□ -1.28
HMGB1P36-201ENST00000487709 XKR5Q6UX68 686 aa7.08□□□□□ -1.28
HMGB1P36-201ENST00000487709 NXPE3Q969Y0 559 aa7.08□□□□□ -1.28
HMGB1P36-201ENST00000487709 BSDC1Q9NW68 430 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P36-201ENST00000487709 SLAIN2Q9P270 581 aa7.08□□□□□ -1.28
HMGB1P36-201ENST00000487709 EREGO14944 169 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 ATP2B4P23634 1241 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 COL19A1Q14993 1142 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 ZAR1Q86SH2 424 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 CCDC82Q8N4S0 544 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 C2CD4AQ8NCU7 369 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 PMEPA1Q969W9 287 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 LRRC4CQ9HCJ2 640 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 PRKAG2Q9UGJ0 569 aa7.07□□□□□ -1.28
HMGB1P36-201ENST00000487709 ATG7O95352 703 aa7.06□□□□□ -1.28
HMGB1P36-201ENST00000487709 GSTM4Q03013 218 aa7.06□□□□□ -1.28
HMGB1P36-201ENST00000487709 EXOSC6Q5RKV6 272 aaKnown RBP7.06□□□□□ -1.28
HMGB1P36-201ENST00000487709 HOMEZQ8IX15 550 aa7.06□□□□□ -1.28
HMGB1P36-201ENST00000487709 YIPF2Q9BWQ6 316 aa7.06□□□□□ -1.28
HMGB1P36-201ENST00000487709 ESRRAP11474 423 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 ITGB5P18084 799 aa7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 RAB6AP20340 208 aa7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 SRPK2P78362 688 aaKnown RBP7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 NOM1Q5C9Z4 860 aaKnown RBP7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 POU5F2Q8N7G0 328 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms