RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
COL4A6-207ENST00000487645 PDS5AQ29RF7 1337 aaKnown RBP16.3■□□□□ 0.2
COL4A6-207ENST00000487645 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
COL4A6-207ENST00000487645 PSMD14O00487 310 aa16.3■□□□□ 0.2
COL4A6-207ENST00000487645 TTC39AQ5SRH9 613 aa16.3■□□□□ 0.2
COL4A6-207ENST00000487645 DACT2Q5SW24 774 aa16.3■□□□□ 0.2
COL4A6-207ENST00000487645 CHD1LQ86WJ1 897 aa16.3■□□□□ 0.2
COL4A6-207ENST00000487645 KDM2BQ8NHM5 1336 aa16.29■□□□□ 0.2
COL4A6-207ENST00000487645 DDNO94850 711 aaPredicted RBP16.29■□□□□ 0.2
COL4A6-207ENST00000487645 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
COL4A6-207ENST00000487645 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
COL4A6-207ENST00000487645 AGBL3Q8NEM8 1001 aa16.29■□□□□ 0.2
COL4A6-207ENST00000487645 WDR66Q8TBY9 1149 aa16.29■□□□□ 0.2
COL4A6-207ENST00000487645 TBC1D22AQ8WUA7 517 aa16.29■□□□□ 0.2
COL4A6-207ENST00000487645 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
COL4A6-207ENST00000487645 IQSEC3Q9UPP2 1182 aaPredicted RBP16.29■□□□□ 0.2
COL4A6-207ENST00000487645 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
COL4A6-207ENST00000487645 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
COL4A6-207ENST00000487645 MMP14P50281 582 aa16.28■□□□□ 0.2
COL4A6-207ENST00000487645 RSBN1LQ6PCB5 846 aaPredicted RBP16.28■□□□□ 0.2
COL4A6-207ENST00000487645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL4A6-207ENST00000487645 DPF2Q92785 391 aa16.28■□□□□ 0.2
COL4A6-207ENST00000487645 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
COL4A6-207ENST00000487645 SCN4AP35499 1836 aa16.28■□□□□ 0.2
COL4A6-207ENST00000487645 ATP5JP18859 108 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 RASGRF1Q13972 1273 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 SPATA5Q8NB90 893 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 FBXW7Q969H0 707 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
COL4A6-207ENST00000487645 GMLQ99445 158 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 LNPKQ9C0E8 428 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 SUGT1Q9Y2Z0 365 aa16.27■□□□□ 0.2
COL4A6-207ENST00000487645 WDR90Q96KV7 1748 aa16.27■□□□□ 0.19
COL4A6-207ENST00000487645 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
COL4A6-207ENST00000487645 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
COL4A6-207ENST00000487645 MCAMP43121 646 aa16.26■□□□□ 0.19
COL4A6-207ENST00000487645 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
COL4A6-207ENST00000487645 ZGPATQ8N5A5 531 aaKnown RBP16.26■□□□□ 0.19
COL4A6-207ENST00000487645 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
COL4A6-207ENST00000487645 SALL3Q9BXA9 1300 aa16.25■□□□□ 0.19
COL4A6-207ENST00000487645 MYO5AQ9Y4I1 1855 aaKnown RBP16.25■□□□□ 0.19
COL4A6-207ENST00000487645 YY1P25490 414 aa16.25■□□□□ 0.19
COL4A6-207ENST00000487645 GMPSP49915 693 aaPredicted RBP16.25■□□□□ 0.19
COL4A6-207ENST00000487645 SCARF1Q14162 830 aa16.25■□□□□ 0.19
COL4A6-207ENST00000487645 MFSD14BQ5SR56 506 aa16.25■□□□□ 0.19
COL4A6-207ENST00000487645 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
COL4A6-207ENST00000487645 ERC2O15083 957 aa16.24■□□□□ 0.19
COL4A6-207ENST00000487645 IGSF3O75054 1194 aa16.24■□□□□ 0.19
COL4A6-207ENST00000487645 MX1P20591 662 aa16.24■□□□□ 0.19
COL4A6-207ENST00000487645 SPTY2D1Q68D10 685 aaPredicted RBP16.24■□□□□ 0.19
COL4A6-207ENST00000487645 CERS5Q8N5B7 392 aa16.24■□□□□ 0.19
COL4A6-207ENST00000487645 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
COL4A6-207ENST00000487645 GPRC5DQ9NZD1 345 aa16.24■□□□□ 0.19
COL4A6-207ENST00000487645 CNOT7Q9UIV1 285 aaKnown RBP16.24■□□□□ 0.19
COL4A6-207ENST00000487645 COL1A1P02452 1464 aaPredicted RBP16.23■□□□□ 0.19
COL4A6-207ENST00000487645 IQCA1LA6NCM1 817 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 H7C1D1 291 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 USP17L8P0C7I0 530 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 SCNN1DP51172 638 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 PDE1AP54750 535 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 OGFOD1Q8N543 542 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
COL4A6-207ENST00000487645 HAUS7Q99871 368 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 MRIQ9BWK5 157 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 OSBPL3Q9H4L5 887 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
COL4A6-207ENST00000487645 MYH2Q9UKX2 1941 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 POTECB2RU33 542 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 GLRX3O76003 335 aaKnown RBP16.22■□□□□ 0.19
COL4A6-207ENST00000487645 CYP2E1P05181 493 aaPredicted RBP16.22■□□□□ 0.19
COL4A6-207ENST00000487645 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
COL4A6-207ENST00000487645 LMOD1P29536 600 aaPredicted RBP16.22■□□□□ 0.19
COL4A6-207ENST00000487645 ZAP70P43403 619 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 ZNF280AP59817 542 aaPredicted RBP16.22■□□□□ 0.19
COL4A6-207ENST00000487645 PI16Q6UXB8 463 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 PLEKHM2Q8IWE5 1019 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 BOLA2Q9H3K6 86 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 HACL1Q9UJ83 578 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 HDAC9Q9UKV0 1011 aa16.22■□□□□ 0.19
COL4A6-207ENST00000487645 AOX1Q06278 1338 aa16.21■□□□□ 0.19
COL4A6-207ENST00000487645 LDHBP07195 334 aaKnown RBP16.21■□□□□ 0.19
COL4A6-207ENST00000487645 HDLBPQ00341 1268 aaKnown RBP16.21■□□□□ 0.19
COL4A6-207ENST00000487645 TTF1Q15361 905 aaPredicted RBP16.21■□□□□ 0.19
COL4A6-207ENST00000487645 PI4K2BQ8TCG2 481 aa16.21■□□□□ 0.19
COL4A6-207ENST00000487645 RRAGCQ9HB90 399 aa16.21■□□□□ 0.19
COL4A6-207ENST00000487645 ABCF2Q9UG63 623 aa16.21■□□□□ 0.19
COL4A6-207ENST00000487645 MAST3O60307 1309 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 DOCK2Q92608 1830 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 MYH7P12883 1935 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 EPS15P42566 896 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 TMED8Q6PL24 325 aaPredicted RBP16.2■□□□□ 0.18
COL4A6-207ENST00000487645 TBC1D9Q6ZT07 1266 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 KIAA0825Q8IV33 1275 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 MICALL2Q8IY33 904 aa16.2■□□□□ 0.18
COL4A6-207ENST00000487645 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
COL4A6-207ENST00000487645 TTF2Q9UNY4 1162 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms