RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PUS3Q9BZE2 481 aaKnown RBP15.43■□□□□ 0.06
VPS16-208ENST00000487461 JAG2Q9Y219 1238 aa15.43■□□□□ 0.06
VPS16-208ENST00000487461 PCDHAC2Q9Y5I4 1007 aa15.43■□□□□ 0.06
VPS16-208ENST00000487461 F8W031 263 aaPredicted RBP15.42■□□□□ 0.06
VPS16-208ENST00000487461 NF2P35240 595 aa15.42■□□□□ 0.06
VPS16-208ENST00000487461 PRKG1Q13976 671 aa15.42■□□□□ 0.06
VPS16-208ENST00000487461 APOBEC3FQ8IUX4 373 aaKnown RBP15.42■□□□□ 0.06
VPS16-208ENST00000487461 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
VPS16-208ENST00000487461 MTMR14Q8NCE2 650 aa15.42■□□□□ 0.06
VPS16-208ENST00000487461 UTYO14607 1347 aa15.42■□□□□ 0.06
VPS16-208ENST00000487461 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
VPS16-208ENST00000487461 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
VPS16-208ENST00000487461 PRMT6Q96LA8 375 aaPredicted RBP15.41■□□□□ 0.06
VPS16-208ENST00000487461 DEFB129Q9H1M3 183 aa15.41■□□□□ 0.06
VPS16-208ENST00000487461 RIPOR2Q9Y4F9 1068 aa15.41■□□□□ 0.06
VPS16-208ENST00000487461 PAPPA2Q9BXP8 1791 aa15.41■□□□□ 0.06
VPS16-208ENST00000487461 E9PSI1 815 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 SLFN5Q08AF3 891 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 UBE4AQ14139 1066 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 CFAP100Q494V2 611 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 ARMC9Q7Z3E5 817 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 TDRD7Q8NHU6 1098 aaKnown RBP15.4■□□□□ 0.06
VPS16-208ENST00000487461 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 FAM84BQ96KN1 310 aaPredicted RBP15.4■□□□□ 0.06
VPS16-208ENST00000487461 BICC1Q9H694 974 aaKnown RBP15.4■□□□□ 0.06
VPS16-208ENST00000487461 FZD1Q9UP38 647 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 AOX1Q06278 1338 aa15.4■□□□□ 0.06
VPS16-208ENST00000487461 HIBADHP31937 336 aaKnown RBP15.39■□□□□ 0.05
VPS16-208ENST00000487461 GYG1P46976 350 aa15.39■□□□□ 0.05
VPS16-208ENST00000487461 TM4SF4P48230 202 aa15.39■□□□□ 0.05
VPS16-208ENST00000487461 RGS19P49795 217 aa15.39■□□□□ 0.05
VPS16-208ENST00000487461 MKRN3Q13064 507 aaKnown RBP15.39■□□□□ 0.05
VPS16-208ENST00000487461 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
VPS16-208ENST00000487461 LDLRAD1Q5T700 205 aa15.39■□□□□ 0.05
VPS16-208ENST00000487461 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
VPS16-208ENST00000487461 FAM205AQ6ZU69 1335 aa15.39■□□□□ 0.05
VPS16-208ENST00000487461 CLRN2A0PK11 232 aa15.38■□□□□ 0.05
VPS16-208ENST00000487461 SPDYE2BA6NHP3 402 aa15.38■□□□□ 0.05
VPS16-208ENST00000487461 SPDYE6P0CI01 402 aa15.38■□□□□ 0.05
VPS16-208ENST00000487461 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
VPS16-208ENST00000487461 ANGEL1Q9UNK9 670 aaKnown RBP15.38■□□□□ 0.05
VPS16-208ENST00000487461 TBC1D8O95759 1140 aa15.37■□□□□ 0.05
VPS16-208ENST00000487461 CDCA7LQ96GN5 454 aa15.37■□□□□ 0.05
VPS16-208ENST00000487461 USP44Q9H0E7 712 aa15.37■□□□□ 0.05
VPS16-208ENST00000487461 PTPRCP08575 1304 aa15.37■□□□□ 0.05
VPS16-208ENST00000487461 MROH5Q6ZUA9 1318 aa15.37■□□□□ 0.05
VPS16-208ENST00000487461 AKAP11Q9UKA4 1901 aa15.37■□□□□ 0.05
VPS16-208ENST00000487461 MYO1BO43795 1136 aa15.36■□□□□ 0.05
VPS16-208ENST00000487461 RBM5P52756 815 aaKnown RBP eCLIP15.36■□□□□ 0.05
VPS16-208ENST00000487461 MFSD14BQ5SR56 506 aa15.36■□□□□ 0.05
VPS16-208ENST00000487461 SPRYD7Q5W111 196 aa15.36■□□□□ 0.05
VPS16-208ENST00000487461 FBXO33Q7Z6M2 555 aa15.36■□□□□ 0.05
VPS16-208ENST00000487461 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
VPS16-208ENST00000487461 PPP2R3BQ9Y5P8 575 aa15.36■□□□□ 0.05
VPS16-208ENST00000487461 A0A1B0GUL6 1792 aa15.35■□□□□ 0.05
VPS16-208ENST00000487461 MAP3K11Q16584 847 aa15.35■□□□□ 0.05
VPS16-208ENST00000487461 NBPF12Q5TAG4 269 aaPredicted RBP15.35■□□□□ 0.05
VPS16-208ENST00000487461 KLHDC4Q8TBB5 520 aa15.35■□□□□ 0.05
VPS16-208ENST00000487461 SLC10A4Q96EP9 437 aa15.35■□□□□ 0.05
VPS16-208ENST00000487461 TTF2Q9UNY4 1162 aaKnown RBP15.35■□□□□ 0.05
VPS16-208ENST00000487461 MLLT1Q03111 559 aaPredicted RBP15.34■□□□□ 0.05
VPS16-208ENST00000487461 RASA3Q14644 834 aa15.34■□□□□ 0.05
VPS16-208ENST00000487461 GRIK5Q16478 980 aa15.34■□□□□ 0.05
VPS16-208ENST00000487461 SUPT20HL1Q3ZLR7 823 aa15.34■□□□□ 0.05
VPS16-208ENST00000487461 METTL24Q5JXM2 366 aa15.34■□□□□ 0.05
VPS16-208ENST00000487461 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
VPS16-208ENST00000487461 TRMT2AQ8IZ69 625 aaKnown RBP15.34■□□□□ 0.05
VPS16-208ENST00000487461 VGLL2Q8N8G2 317 aa15.34■□□□□ 0.05
VPS16-208ENST00000487461 ZNF296Q8WUU4 475 aaPredicted RBP15.34■□□□□ 0.05
VPS16-208ENST00000487461 CLMNQ96JQ2 1002 aa15.34■□□□□ 0.05
VPS16-208ENST00000487461 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
VPS16-208ENST00000487461 ZNF70Q9UC06 446 aaPredicted RBP15.34■□□□□ 0.05
VPS16-208ENST00000487461 SERPINA10Q9UK55 444 aa15.34■□□□□ 0.05
VPS16-208ENST00000487461 IQSEC3Q9UPP2 1182 aaPredicted RBP15.34■□□□□ 0.05
VPS16-208ENST00000487461 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.05
VPS16-208ENST00000487461 PPP1R12BO60237 982 aaPredicted RBP15.33■□□□□ 0.04
VPS16-208ENST00000487461 USP2O75604 605 aaPredicted RBP15.33■□□□□ 0.04
VPS16-208ENST00000487461 PDE8BO95263 885 aa15.33■□□□□ 0.04
VPS16-208ENST00000487461 SREBF2Q12772 1141 aa15.33■□□□□ 0.04
VPS16-208ENST00000487461 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
VPS16-208ENST00000487461 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
VPS16-208ENST00000487461 R3HDMLQ9H3Y0 253 aa15.33■□□□□ 0.04
VPS16-208ENST00000487461 TDRD3Q9H7E2 651 aaKnown RBP15.33■□□□□ 0.04
VPS16-208ENST00000487461 SSC5DA1L4H1 1573 aa15.32■□□□□ 0.04
VPS16-208ENST00000487461 GPR25O00155 361 aa15.32■□□□□ 0.04
VPS16-208ENST00000487461 BCAMP50895 628 aa15.32■□□□□ 0.04
VPS16-208ENST00000487461 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
VPS16-208ENST00000487461 DZIP1LQ8IYY4 767 aaKnown RBP15.32■□□□□ 0.04
VPS16-208ENST00000487461 CRKP46108 304 aa15.31■□□□□ 0.04
VPS16-208ENST00000487461 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
VPS16-208ENST00000487461 CHAF1AQ13111 956 aaPredicted RBP15.31■□□□□ 0.04
VPS16-208ENST00000487461 CAVIN4Q5BKX8 364 aa15.31■□□□□ 0.04
VPS16-208ENST00000487461 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
VPS16-208ENST00000487461 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
VPS16-208ENST00000487461 MANSC4A6NHS7 340 aaPredicted RBP15.3■□□□□ 0.04
VPS16-208ENST00000487461 UNCXA6NJT0 531 aa15.3■□□□□ 0.04
VPS16-208ENST00000487461 FGFR2P21802 821 aa15.3■□□□□ 0.04
VPS16-208ENST00000487461 NOM1Q5C9Z4 860 aaKnown RBP15.3■□□□□ 0.04
VPS16-208ENST00000487461 CDAN1Q8IWY9 1227 aa15.3■□□□□ 0.04
VPS16-208ENST00000487461 TEPSINQ96N21 525 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms