RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TDRD7Q8NHU6 1098 aaKnown RBP23.95■■□□□ 1.42
CLIP2-206ENST00000487091 FAM205AQ6ZU69 1335 aa23.94■■□□□ 1.42
CLIP2-206ENST00000487091 CA12O43570 354 aa23.94■■□□□ 1.42
CLIP2-206ENST00000487091 LRRC24Q50LG9 513 aa23.94■■□□□ 1.42
CLIP2-206ENST00000487091 MTMR14Q8NCE2 650 aa23.94■■□□□ 1.42
CLIP2-206ENST00000487091 FAM84BQ96KN1 310 aaPredicted RBP23.94■■□□□ 1.42
CLIP2-206ENST00000487091 ZNF157P51786 506 aaPredicted RBP23.93■■□□□ 1.42
CLIP2-206ENST00000487091 DLGAP5Q15398 846 aa23.93■■□□□ 1.42
CLIP2-206ENST00000487091 METTL24Q5JXM2 366 aa23.93■■□□□ 1.42
CLIP2-206ENST00000487091 ARHGAP45Q92619 1136 aa23.93■■□□□ 1.42
CLIP2-206ENST00000487091 FAM155AB1AL88 458 aaPredicted RBP23.92■■□□□ 1.42
CLIP2-206ENST00000487091 PDE8BO95263 885 aa23.92■■□□□ 1.42
CLIP2-206ENST00000487091 GYG1P46976 350 aa23.92■■□□□ 1.42
CLIP2-206ENST00000487091 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
CLIP2-206ENST00000487091 APOBEC3FQ8IUX4 373 aaKnown RBP23.92■■□□□ 1.42
CLIP2-206ENST00000487091 VGLL2Q8N8G2 317 aa23.92■■□□□ 1.42
CLIP2-206ENST00000487091 SCAF8Q9UPN6 1271 aaKnown RBP23.92■■□□□ 1.42
CLIP2-206ENST00000487091 HDAC5Q9UQL6 1122 aa23.92■■□□□ 1.42
CLIP2-206ENST00000487091 PAPPA2Q9BXP8 1791 aa23.91■■□□□ 1.42
CLIP2-206ENST00000487091 UBTFL1P0CB47 393 aaPredicted RBP23.91■■□□□ 1.42
CLIP2-206ENST00000487091 FBXO33Q7Z6M2 555 aa23.91■■□□□ 1.42
CLIP2-206ENST00000487091 MIER1Q8N108 512 aa23.91■■□□□ 1.42
CLIP2-206ENST00000487091 KLHDC4Q8TBB5 520 aa23.91■■□□□ 1.42
CLIP2-206ENST00000487091 KIF16BQ96L93 1317 aa23.9■■□□□ 1.42
CLIP2-206ENST00000487091 RFX5P48382 616 aaPredicted RBP23.9■■□□□ 1.42
CLIP2-206ENST00000487091 SLC10A3P09131 477 aa23.89■■□□□ 1.41
CLIP2-206ENST00000487091 NF2P35240 595 aa23.89■■□□□ 1.41
CLIP2-206ENST00000487091 CAVIN4Q5BKX8 364 aa23.89■■□□□ 1.41
CLIP2-206ENST00000487091 PRAMEF18Q5VWM3 479 aa23.89■■□□□ 1.41
CLIP2-206ENST00000487091 ZIC5Q96T25 663 aa23.89■■□□□ 1.41
CLIP2-206ENST00000487091 JAG2Q9Y219 1238 aa23.89■■□□□ 1.41
CLIP2-206ENST00000487091 F8W031 263 aaPredicted RBP23.88■■□□□ 1.41
CLIP2-206ENST00000487091 EYA2O00167 538 aa23.88■■□□□ 1.41
CLIP2-206ENST00000487091 PTPN12Q05209 780 aaKnown RBP23.88■■□□□ 1.41
CLIP2-206ENST00000487091 CFAP100Q494V2 611 aa23.88■■□□□ 1.41
CLIP2-206ENST00000487091 MFSD14BQ5SR56 506 aa23.88■■□□□ 1.41
CLIP2-206ENST00000487091 VPS37DQ86XT2 251 aa23.88■■□□□ 1.41
CLIP2-206ENST00000487091 FBXO3Q9UK99 471 aa23.88■■□□□ 1.41
CLIP2-206ENST00000487091 SPDYE2BA6NHP3 402 aa23.87■■□□□ 1.41
CLIP2-206ENST00000487091 MYO1BO43795 1136 aa23.87■■□□□ 1.41
CLIP2-206ENST00000487091 SPDYE6P0CI01 402 aa23.87■■□□□ 1.41
CLIP2-206ENST00000487091 INTS3Q68E01 1043 aaKnown RBP23.87■■□□□ 1.41
CLIP2-206ENST00000487091 ECM29Q5VYK3 1845 aa23.87■■□□□ 1.41
CLIP2-206ENST00000487091 FGFR2P21802 821 aa23.86■■□□□ 1.41
CLIP2-206ENST00000487091 KIF23Q02241 960 aaPredicted RBP23.86■■□□□ 1.41
CLIP2-206ENST00000487091 PUM3Q15397 648 aaKnown RBP23.86■■□□□ 1.41
CLIP2-206ENST00000487091 PRMT6Q96LA8 375 aaPredicted RBP23.86■■□□□ 1.41
CLIP2-206ENST00000487091 COL1A1P02452 1464 aaPredicted RBP23.86■■□□□ 1.41
CLIP2-206ENST00000487091 IPO8O15397 1037 aaKnown RBP23.85■■□□□ 1.41
CLIP2-206ENST00000487091 IFIT1P09914 478 aaKnown RBP23.85■■□□□ 1.41
CLIP2-206ENST00000487091 MOB2Q70IA6 237 aa23.85■■□□□ 1.41
CLIP2-206ENST00000487091 REM2Q8IYK8 340 aaPredicted RBP23.85■■□□□ 1.41
CLIP2-206ENST00000487091 DEFB129Q9H1M3 183 aa23.85■■□□□ 1.41
CLIP2-206ENST00000487091 PCDHAC2Q9Y5I4 1007 aa23.85■■□□□ 1.41
CLIP2-206ENST00000487091 PPP2R3BQ9Y5P8 575 aa23.85■■□□□ 1.41
CLIP2-206ENST00000487091 UBE2Q2LH0YL09 131 aa23.84■■□□□ 1.41
CLIP2-206ENST00000487091 CIAO1O76071 339 aa23.84■■□□□ 1.41
CLIP2-206ENST00000487091 RASAL3Q86YV0 1011 aa23.84■■□□□ 1.41
CLIP2-206ENST00000487091 SERPINA10Q9UK55 444 aa23.84■■□□□ 1.41
CLIP2-206ENST00000487091 TTF2Q9UNY4 1162 aaKnown RBP23.84■■□□□ 1.41
CLIP2-206ENST00000487091 LRRFIP2Q9Y608 721 aaKnown RBP23.84■■□□□ 1.41
CLIP2-206ENST00000487091 FRAT2O75474 233 aaPredicted RBP23.83■■□□□ 1.41
CLIP2-206ENST00000487091 TTLL12Q14166 644 aaPredicted RBP23.83■■□□□ 1.41
CLIP2-206ENST00000487091 ATG9AQ7Z3C6 839 aa23.83■■□□□ 1.41
CLIP2-206ENST00000487091 TBC1D22AQ8WUA7 517 aa23.83■■□□□ 1.41
CLIP2-206ENST00000487091 MEIS3Q99687 375 aa23.83■■□□□ 1.41
CLIP2-206ENST00000487091 TSKSQ9UJT2 592 aa23.83■■□□□ 1.41
CLIP2-206ENST00000487091 GNAI3P08754 354 aa23.82■■□□□ 1.4
CLIP2-206ENST00000487091 BCAMP50895 628 aa23.82■■□□□ 1.4
CLIP2-206ENST00000487091 RBM5P52756 815 aaKnown RBP eCLIP23.82■■□□□ 1.4
CLIP2-206ENST00000487091 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
CLIP2-206ENST00000487091 ARMC9Q7Z3E5 817 aa23.82■■□□□ 1.4
CLIP2-206ENST00000487091 LPIN2Q92539 896 aa23.82■■□□□ 1.4
CLIP2-206ENST00000487091 SAGE1Q9NXZ1 904 aa23.82■■□□□ 1.4
CLIP2-206ENST00000487091 ARAP2Q8WZ64 1704 aa23.81■■□□□ 1.4
CLIP2-206ENST00000487091 SLC5A1P13866 664 aa23.81■■□□□ 1.4
CLIP2-206ENST00000487091 ATF7IPQ6VMQ6 1270 aa23.81■■□□□ 1.4
CLIP2-206ENST00000487091 CSRNP1Q96S65 589 aa23.81■■□□□ 1.4
CLIP2-206ENST00000487091 IQSEC3Q9UPP2 1182 aaPredicted RBP23.81■■□□□ 1.4
CLIP2-206ENST00000487091 CLRN2A0PK11 232 aa23.8■■□□□ 1.4
CLIP2-206ENST00000487091 CAPN15O75808 1086 aa23.8■■□□□ 1.4
CLIP2-206ENST00000487091 BCAR3O75815 825 aa23.8■■□□□ 1.4
CLIP2-206ENST00000487091 CHAF1AQ13111 956 aaPredicted RBP23.8■■□□□ 1.4
CLIP2-206ENST00000487091 CEP126Q9P2H0 1117 aa23.8■■□□□ 1.4
CLIP2-206ENST00000487091 AKAP11Q9UKA4 1901 aa23.8■■□□□ 1.4
CLIP2-206ENST00000487091 TRIM27P14373 513 aa23.79■■□□□ 1.4
CLIP2-206ENST00000487091 HDLBPQ00341 1268 aaKnown RBP23.79■■□□□ 1.4
CLIP2-206ENST00000487091 SIL1Q9H173 461 aa23.79■■□□□ 1.4
CLIP2-206ENST00000487091 VEZTQ9HBM0 779 aa23.79■■□□□ 1.4
CLIP2-206ENST00000487091 COPRSQ9NQ92 184 aa23.79■■□□□ 1.4
CLIP2-206ENST00000487091 SUGT1Q9Y2Z0 365 aa23.79■■□□□ 1.4
CLIP2-206ENST00000487091 AOX1Q06278 1338 aa23.79■■□□□ 1.4
CLIP2-206ENST00000487091 IL15P40933 162 aaPredicted RBP23.78■■□□□ 1.4
CLIP2-206ENST00000487091 CRKP46108 304 aa23.78■■□□□ 1.4
CLIP2-206ENST00000487091 SUPT20HL1Q3ZLR7 823 aa23.78■■□□□ 1.4
CLIP2-206ENST00000487091 SPDYE2Q495Y8 402 aa23.78■■□□□ 1.4
CLIP2-206ENST00000487091 LDLRAD1Q5T700 205 aa23.78■■□□□ 1.4
CLIP2-206ENST00000487091 DZIP1LQ8IYY4 767 aaKnown RBP23.78■■□□□ 1.4
CLIP2-206ENST00000487091 MRIQ9BWK5 157 aa23.78■■□□□ 1.4
CLIP2-206ENST00000487091 CASP8AP2Q9UKL3 1982 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms