RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 CELF2O95319 508 aaKnown RBP19.87■□□□□ 0.77
HDAC8-218ENST00000486704 IFIT1P09914 478 aaKnown RBP19.87■□□□□ 0.77
HDAC8-218ENST00000486704 IL15P40933 162 aaPredicted RBP19.87■□□□□ 0.77
HDAC8-218ENST00000486704 CAVIN4Q5BKX8 364 aa19.87■□□□□ 0.77
HDAC8-218ENST00000486704 USP48Q86UV5 1035 aa19.87■□□□□ 0.77
HDAC8-218ENST00000486704 SULF1Q8IWU6 871 aa19.87■□□□□ 0.77
HDAC8-218ENST00000486704 SIL1Q9H173 461 aa19.87■□□□□ 0.77
HDAC8-218ENST00000486704 ABT1Q9ULW3 272 aaKnown RBP19.87■□□□□ 0.77
HDAC8-218ENST00000486704 TLL2Q9Y6L7 1015 aa19.87■□□□□ 0.77
HDAC8-218ENST00000486704 PCNTO95613 3336 aa19.86■□□□□ 0.77
HDAC8-218ENST00000486704 PAPPA2Q9BXP8 1791 aa19.86■□□□□ 0.77
HDAC8-218ENST00000486704 ADM5C9JUS6 153 aa19.86■□□□□ 0.77
HDAC8-218ENST00000486704 WNT10BO00744 389 aa19.86■□□□□ 0.77
HDAC8-218ENST00000486704 SRGAP3O43295 1099 aa19.86■□□□□ 0.77
HDAC8-218ENST00000486704 RLBP1P12271 317 aa19.86■□□□□ 0.77
HDAC8-218ENST00000486704 ANGEL2Q5VTE6 544 aaKnown RBP19.86■□□□□ 0.77
HDAC8-218ENST00000486704 LPIN2Q92539 896 aa19.86■□□□□ 0.77
HDAC8-218ENST00000486704 ZBED3Q96IU2 234 aaPredicted RBP19.86■□□□□ 0.77
HDAC8-218ENST00000486704 SLC5A1P13866 664 aa19.85■□□□□ 0.77
HDAC8-218ENST00000486704 NBPF9Q3BBW0 867 aa19.85■□□□□ 0.77
HDAC8-218ENST00000486704 VPS37DQ86XT2 251 aa19.85■□□□□ 0.77
HDAC8-218ENST00000486704 MTMR14Q8NCE2 650 aa19.85■□□□□ 0.77
HDAC8-218ENST00000486704 HHIPL1Q96JK4 782 aa19.85■□□□□ 0.77
HDAC8-218ENST00000486704 CEP126Q9P2H0 1117 aa19.85■□□□□ 0.77
HDAC8-218ENST00000486704 PA2G4Q9UQ80 394 aaKnown RBP19.85■□□□□ 0.77
HDAC8-218ENST00000486704 COL1A1P02452 1464 aaPredicted RBP19.85■□□□□ 0.77
HDAC8-218ENST00000486704 DEFB115Q30KQ5 88 aa19.84■□□□□ 0.77
HDAC8-218ENST00000486704 SAPCD2Q86UD0 394 aa19.84■□□□□ 0.77
HDAC8-218ENST00000486704 VEGFBP49765 207 aa19.83■□□□□ 0.77
HDAC8-218ENST00000486704 ATP2B3Q16720 1220 aa19.83■□□□□ 0.77
HDAC8-218ENST00000486704 MFSD14BQ5SR56 506 aa19.83■□□□□ 0.77
HDAC8-218ENST00000486704 ITPRIPQ8IWB1 547 aa19.83■□□□□ 0.77
HDAC8-218ENST00000486704 ZBTB22O15209 634 aa19.82■□□□□ 0.76
HDAC8-218ENST00000486704 MS4A1P11836 297 aa19.82■□□□□ 0.76
HDAC8-218ENST00000486704 BCAMP50895 628 aa19.82■□□□□ 0.76
HDAC8-218ENST00000486704 TBC1D22AQ8WUA7 517 aa19.82■□□□□ 0.76
HDAC8-218ENST00000486704 CDCA5Q96FF9 252 aa19.82■□□□□ 0.76
HDAC8-218ENST00000486704 ZNF408Q9H9D4 720 aa19.82■□□□□ 0.76
HDAC8-218ENST00000486704 JAG2Q9Y219 1238 aa19.82■□□□□ 0.76
HDAC8-218ENST00000486704 PNMA6EA0A0J9YXQ4 647 aa19.81■□□□□ 0.76
HDAC8-218ENST00000486704 ZBTB7BO15156 539 aaPredicted RBP19.81■□□□□ 0.76
HDAC8-218ENST00000486704 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
HDAC8-218ENST00000486704 DLK2Q6UY11 383 aa19.81■□□□□ 0.76
HDAC8-218ENST00000486704 APOBEC3FQ8IUX4 373 aaKnown RBP19.81■□□□□ 0.76
HDAC8-218ENST00000486704 RCAN3Q9UKA8 241 aa19.81■□□□□ 0.76
HDAC8-218ENST00000486704 SPDYE2BA6NHP3 402 aa19.8■□□□□ 0.76
HDAC8-218ENST00000486704 SPDYE6P0CI01 402 aa19.8■□□□□ 0.76
HDAC8-218ENST00000486704 ECE1P42892 770 aa19.8■□□□□ 0.76
HDAC8-218ENST00000486704 IQSEC3Q9UPP2 1182 aaPredicted RBP19.8■□□□□ 0.76
HDAC8-218ENST00000486704 WDR33Q9C0J8 1336 aaKnown RBP19.79■□□□□ 0.76
HDAC8-218ENST00000486704 F8W031 263 aaPredicted RBP19.79■□□□□ 0.76
HDAC8-218ENST00000486704 FRAT2O75474 233 aaPredicted RBP19.79■□□□□ 0.76
HDAC8-218ENST00000486704 POLA2Q14181 598 aa19.79■□□□□ 0.76
HDAC8-218ENST00000486704 CFAP100Q494V2 611 aa19.79■□□□□ 0.76
HDAC8-218ENST00000486704 CAPNS2Q96L46 248 aa19.79■□□□□ 0.76
HDAC8-218ENST00000486704 GBA2Q9HCG7 927 aaPredicted RBP19.79■□□□□ 0.76
HDAC8-218ENST00000486704 SERPINA10Q9UK55 444 aa19.79■□□□□ 0.76
HDAC8-218ENST00000486704 PANK1Q8TE04 598 aa19.78■□□□□ 0.76
HDAC8-218ENST00000486704 SSH3Q8TE77 659 aa19.78■□□□□ 0.76
HDAC8-218ENST00000486704 TTF2Q9UNY4 1162 aaKnown RBP19.78■□□□□ 0.76
HDAC8-218ENST00000486704 SUGT1Q9Y2Z0 365 aa19.78■□□□□ 0.76
HDAC8-218ENST00000486704 SEMA3EO15041 775 aa19.77■□□□□ 0.76
HDAC8-218ENST00000486704 HSPA1AP0DMV8 641 aaKnown RBP19.77■□□□□ 0.76
HDAC8-218ENST00000486704 HSPA1BP0DMV9 641 aaKnown RBP19.77■□□□□ 0.76
HDAC8-218ENST00000486704 FKBP1BP68106 108 aa19.77■□□□□ 0.76
HDAC8-218ENST00000486704 ATP8B2P98198 1209 aa19.77■□□□□ 0.76
HDAC8-218ENST00000486704 HDLBPQ00341 1268 aaKnown RBP19.77■□□□□ 0.76
HDAC8-218ENST00000486704 CHAF1AQ13111 956 aaPredicted RBP19.77■□□□□ 0.76
HDAC8-218ENST00000486704 C2orf69Q8N8R5 385 aa19.77■□□□□ 0.76
HDAC8-218ENST00000486704 AKAP2Q9Y2D5 859 aa19.77■□□□□ 0.76
HDAC8-218ENST00000486704 MAST3O60307 1309 aa19.76■□□□□ 0.75
HDAC8-218ENST00000486704 MYO1BO43795 1136 aa19.76■□□□□ 0.75
HDAC8-218ENST00000486704 HUNKP57058 714 aa19.76■□□□□ 0.75
HDAC8-218ENST00000486704 TFCP2Q12800 502 aa19.76■□□□□ 0.75
HDAC8-218ENST00000486704 CYP4F22Q6NT55 531 aa19.76■□□□□ 0.75
HDAC8-218ENST00000486704 C1orf115Q9H7X2 142 aa19.76■□□□□ 0.75
HDAC8-218ENST00000486704 GNL3LQ9NVN8 582 aaKnown RBP19.76■□□□□ 0.75
HDAC8-218ENST00000486704 A0A1B0GUL7 405 aa19.75■□□□□ 0.75
HDAC8-218ENST00000486704 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
HDAC8-218ENST00000486704 PAXIP1Q6ZW49 1069 aaPredicted RBP19.75■□□□□ 0.75
HDAC8-218ENST00000486704 WDR66Q8TBY9 1149 aa19.75■□□□□ 0.75
HDAC8-218ENST00000486704 PRMT6Q96LA8 375 aaPredicted RBP19.75■□□□□ 0.75
HDAC8-218ENST00000486704 PCDHAC2Q9Y5I4 1007 aa19.75■□□□□ 0.75
HDAC8-218ENST00000486704 PPP2R3BQ9Y5P8 575 aa19.75■□□□□ 0.75
HDAC8-218ENST00000486704 LAMB1P07942 1786 aa19.75■□□□□ 0.75
HDAC8-218ENST00000486704 PDS5AQ29RF7 1337 aaKnown RBP19.75■□□□□ 0.75
HDAC8-218ENST00000486704 MYH2Q9UKX2 1941 aa19.74■□□□□ 0.75
HDAC8-218ENST00000486704 ADORA1P30542 326 aa19.74■□□□□ 0.75
HDAC8-218ENST00000486704 PHKA1P46020 1223 aa19.74■□□□□ 0.75
HDAC8-218ENST00000486704 G3BP1Q13283 466 aaKnown RBP eCLIP19.74■□□□□ 0.75
HDAC8-218ENST00000486704 GRIK5Q16478 980 aa19.74■□□□□ 0.75
HDAC8-218ENST00000486704 CCDC102BQ68D86 513 aa19.74■□□□□ 0.75
HDAC8-218ENST00000486704 MRIQ9BWK5 157 aa19.74■□□□□ 0.75
HDAC8-218ENST00000486704 SCAF8Q9UPN6 1271 aaKnown RBP19.74■□□□□ 0.75
HDAC8-218ENST00000486704 SALL1Q9NSC2 1324 aa19.74■□□□□ 0.75
HDAC8-218ENST00000486704 MAP2K2P36507 400 aa19.73■□□□□ 0.75
HDAC8-218ENST00000486704 CRKP46108 304 aa19.73■□□□□ 0.75
HDAC8-218ENST00000486704 RBM5P52756 815 aaKnown RBP eCLIP19.73■□□□□ 0.75
HDAC8-218ENST00000486704 SPDYE2Q495Y8 402 aa19.73■□□□□ 0.75
HDAC8-218ENST00000486704 CEP85Q6P2H3 762 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms