RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 POTEIP0CG38 1075 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 POTEJP0CG39 1038 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 RHPN1Q8TCX5 695 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 DPF2Q92785 391 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 GPR108Q9NPR9 543 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 ADARB2Q9NS39 739 aaKnown RBP14.59□□□□□ -0.07
HPS4-214ENST00000485842 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
HPS4-214ENST00000485842 FAM205AQ6ZU69 1335 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
HPS4-214ENST00000485842 COL1A1P02452 1464 aaPredicted RBP14.58□□□□□ -0.08
HPS4-214ENST00000485842 TOMM70O94826 608 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
HPS4-214ENST00000485842 CCDC102BQ68D86 513 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
HPS4-214ENST00000485842 KIAA0825Q8IV33 1275 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 CERS5Q8N5B7 392 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 TRPM4Q8TD43 1214 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 GMLQ99445 158 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
HPS4-214ENST00000485842 F8W031 263 aaPredicted RBP14.57□□□□□ -0.08
HPS4-214ENST00000485842 RAB11FIP3O75154 756 aa14.57□□□□□ -0.08
HPS4-214ENST00000485842 USP17L8P0C7I0 530 aa14.57□□□□□ -0.08
HPS4-214ENST00000485842 TBC1D10BQ4KMP7 808 aaPredicted RBP14.57□□□□□ -0.08
HPS4-214ENST00000485842 SAMD7Q7Z3H4 446 aa14.57□□□□□ -0.08
HPS4-214ENST00000485842 AACSQ86V21 672 aa14.57□□□□□ -0.08
HPS4-214ENST00000485842 DBNDD2Q9BQY9 259 aa14.57□□□□□ -0.08
HPS4-214ENST00000485842 CCDC8Q9H0W5 538 aaPredicted RBP14.57□□□□□ -0.08
HPS4-214ENST00000485842 TLR7Q9NYK1 1049 aaKnown RBP14.57□□□□□ -0.08
HPS4-214ENST00000485842 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
HPS4-214ENST00000485842 AAMPQ13685 434 aa14.56□□□□□ -0.08
HPS4-214ENST00000485842 KIF4BQ2VIQ3 1234 aa14.56□□□□□ -0.08
HPS4-214ENST00000485842 USP50Q70EL3 339 aaPredicted RBP14.56□□□□□ -0.08
HPS4-214ENST00000485842 LDHDQ86WU2 507 aa14.56□□□□□ -0.08
HPS4-214ENST00000485842 RBM46Q8TBY0 533 aaKnown RBP14.56□□□□□ -0.08
HPS4-214ENST00000485842 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
HPS4-214ENST00000485842 EGFRP00533 1210 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 FKBP1AP62942 108 aaKnown RBP14.55□□□□□ -0.08
HPS4-214ENST00000485842 RASGRF1Q13972 1273 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 TTC39AQ5SRH9 613 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 CLASRPQ8N2M8 674 aaKnown RBP14.55□□□□□ -0.08
HPS4-214ENST00000485842 OGFOD1Q8N543 542 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 SMC1BQ8NDV3 1235 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 TBC1D22AQ8WUA7 517 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 DCTPP1Q9H773 170 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 DBNLQ9UJU6 430 aaKnown RBP14.55□□□□□ -0.08
HPS4-214ENST00000485842 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 DENND2AQ9ULE3 1009 aa14.55□□□□□ -0.08
HPS4-214ENST00000485842 SEMA3EO15041 775 aa14.54□□□□□ -0.08
HPS4-214ENST00000485842 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
HPS4-214ENST00000485842 HIRAP54198 1017 aaPredicted RBP14.54□□□□□ -0.08
HPS4-214ENST00000485842 ZNF280AP59817 542 aaPredicted RBP14.54□□□□□ -0.08
HPS4-214ENST00000485842 GRIK5Q16478 980 aa14.54□□□□□ -0.08
HPS4-214ENST00000485842 CCDC158Q5M9N0 1113 aa14.54□□□□□ -0.08
HPS4-214ENST00000485842 WDR66Q8TBY9 1149 aa14.54□□□□□ -0.08
HPS4-214ENST00000485842 LRRCC1Q9C099 1032 aa14.54□□□□□ -0.08
HPS4-214ENST00000485842 MYOZ2Q9NPC6 264 aa14.54□□□□□ -0.08
HPS4-214ENST00000485842 SMARCA5O60264 1052 aaPredicted RBP14.53□□□□□ -0.08
HPS4-214ENST00000485842 IFIT2P09913 472 aaKnown RBP14.53□□□□□ -0.08
HPS4-214ENST00000485842 UQCRFS1P1P0C7P4 283 aa14.53□□□□□ -0.08
HPS4-214ENST00000485842 ARID4AP29374 1257 aaPredicted RBP14.53□□□□□ -0.08
HPS4-214ENST00000485842 C1QTNF8P60827 252 aa14.53□□□□□ -0.08
HPS4-214ENST00000485842 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
HPS4-214ENST00000485842 PI16Q6UXB8 463 aa14.53□□□□□ -0.08
HPS4-214ENST00000485842 TTF2Q9UNY4 1162 aaKnown RBP14.53□□□□□ -0.08
HPS4-214ENST00000485842 RBM5P52756 815 aaKnown RBP eCLIP14.52□□□□□ -0.09
HPS4-214ENST00000485842 SCARF1Q14162 830 aa14.52□□□□□ -0.09
HPS4-214ENST00000485842 HMG20BQ9P0W2 317 aa14.52□□□□□ -0.09
HPS4-214ENST00000485842 ASTN2O75129 1339 aaPredicted RBP14.51□□□□□ -0.09
HPS4-214ENST00000485842 MCAMP43121 646 aa14.51□□□□□ -0.09
HPS4-214ENST00000485842 FSTL1Q12841 308 aa14.51□□□□□ -0.09
HPS4-214ENST00000485842 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
HPS4-214ENST00000485842 SPATA5Q8NB90 893 aa14.51□□□□□ -0.09
HPS4-214ENST00000485842 SNRKQ9NRH2 765 aa14.51□□□□□ -0.09
HPS4-214ENST00000485842 GGA3Q9NZ52 723 aa14.51□□□□□ -0.09
HPS4-214ENST00000485842 ABCF2Q9UG63 623 aa14.51□□□□□ -0.09
HPS4-214ENST00000485842 AKAP11Q9UKA4 1901 aa14.51□□□□□ -0.09
HPS4-214ENST00000485842 PDS5AQ29RF7 1337 aaKnown RBP14.5□□□□□ -0.09
HPS4-214ENST00000485842 PRDX5P30044 214 aa14.5□□□□□ -0.09
HPS4-214ENST00000485842 DLGAP5Q15398 846 aa14.5□□□□□ -0.09
HPS4-214ENST00000485842 NBPF9Q3BBW0 867 aa14.5□□□□□ -0.09
HPS4-214ENST00000485842 CFAP100Q494V2 611 aa14.5□□□□□ -0.09
HPS4-214ENST00000485842 RWDD1Q9H446 243 aaPredicted RBP14.5□□□□□ -0.09
HPS4-214ENST00000485842 PCDHAC2Q9Y5I4 1007 aa14.5□□□□□ -0.09
HPS4-214ENST00000485842 MAST3O60307 1309 aa14.49□□□□□ -0.09
HPS4-214ENST00000485842 SALL1Q9NSC2 1324 aa14.49□□□□□ -0.09
HPS4-214ENST00000485842 WNT10BO00744 389 aa14.49□□□□□ -0.09
HPS4-214ENST00000485842 LDHBP07195 334 aaKnown RBP14.49□□□□□ -0.09
HPS4-214ENST00000485842 MMP14P50281 582 aa14.49□□□□□ -0.09
HPS4-214ENST00000485842 ANGEL2Q5VTE6 544 aaKnown RBP14.49□□□□□ -0.09
HPS4-214ENST00000485842 CNTROBQ8N137 903 aa14.49□□□□□ -0.09
HPS4-214ENST00000485842 ZGPATQ8N5A5 531 aaKnown RBP14.49□□□□□ -0.09
HPS4-214ENST00000485842 ZC3H15Q8WU90 426 aaKnown RBP14.49□□□□□ -0.09
HPS4-214ENST00000485842 DCPSQ96C86 337 aaKnown RBP14.49□□□□□ -0.09
HPS4-214ENST00000485842 GLIS2Q9BZE0 524 aaPredicted RBP14.49□□□□□ -0.09
HPS4-214ENST00000485842 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
HPS4-214ENST00000485842 SUGT1Q9Y2Z0 365 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms