RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 UBE2Q2LH0YL09 131 aa32.39■■■□□ 2.78
HLA-F-227ENST00000485513 TTLL12Q14166 644 aaPredicted RBP32.39■■■□□ 2.78
HLA-F-227ENST00000485513 DLGAP5Q15398 846 aa32.39■■■□□ 2.78
HLA-F-227ENST00000485513 PUS3Q9BZE2 481 aaKnown RBP32.39■■■□□ 2.78
HLA-F-227ENST00000485513 BICC1Q9H694 974 aaKnown RBP32.39■■■□□ 2.78
HLA-F-227ENST00000485513 FKBP1AP62942 108 aaKnown RBP32.38■■■□□ 2.77
HLA-F-227ENST00000485513 UBE4AQ14139 1066 aa32.38■■■□□ 2.77
HLA-F-227ENST00000485513 CSRNP1Q96S65 589 aa32.38■■■□□ 2.77
HLA-F-227ENST00000485513 RABL6Q3YEC7 729 aaPredicted RBP32.37■■■□□ 2.77
HLA-F-227ENST00000485513 MTMR14Q8NCE2 650 aa32.37■■■□□ 2.77
HLA-F-227ENST00000485513 RNF186Q9NXI6 227 aa32.37■■■□□ 2.77
HLA-F-227ENST00000485513 JAG2Q9Y219 1238 aa32.37■■■□□ 2.77
HLA-F-227ENST00000485513 F8W031 263 aaPredicted RBP32.36■■■□□ 2.77
HLA-F-227ENST00000485513 REM2Q8IYK8 340 aaPredicted RBP32.36■■■□□ 2.77
HLA-F-227ENST00000485513 TRPA1O75762 1119 aa32.35■■■□□ 2.77
HLA-F-227ENST00000485513 CDCA7LQ96GN5 454 aa32.35■■■□□ 2.77
HLA-F-227ENST00000485513 RIPOR2Q9Y4F9 1068 aa32.35■■■□□ 2.77
HLA-F-227ENST00000485513 MROH5Q6ZUA9 1318 aa32.34■■■□□ 2.77
HLA-F-227ENST00000485513 ANKRD44Q8N8A2 993 aa32.34■■■□□ 2.77
HLA-F-227ENST00000485513 ECM29Q5VYK3 1845 aa32.33■■■□□ 2.77
HLA-F-227ENST00000485513 GYG1P46976 350 aa32.33■■■□□ 2.77
HLA-F-227ENST00000485513 ALDH1L2Q3SY69 923 aa32.33■■■□□ 2.77
HLA-F-227ENST00000485513 CFAP100Q494V2 611 aa32.33■■■□□ 2.77
HLA-F-227ENST00000485513 COL1A1P02452 1464 aaPredicted RBP32.33■■■□□ 2.77
HLA-F-227ENST00000485513 FAM205AQ6ZU69 1335 aa32.32■■■□□ 2.76
HLA-F-227ENST00000485513 HIBADHP31937 336 aaKnown RBP32.32■■■□□ 2.76
HLA-F-227ENST00000485513 TDRD7Q8NHU6 1098 aaKnown RBP32.32■■■□□ 2.76
HLA-F-227ENST00000485513 MCOLN1Q9GZU1 580 aa32.32■■■□□ 2.76
HLA-F-227ENST00000485513 PCDHAC2Q9Y5I4 1007 aa32.32■■■□□ 2.76
HLA-F-227ENST00000485513 ARMC9Q7Z3E5 817 aa32.31■■■□□ 2.76
HLA-F-227ENST00000485513 FAM84BQ96KN1 310 aaPredicted RBP32.31■■■□□ 2.76
HLA-F-227ENST00000485513 USP44Q9H0E7 712 aa32.31■■■□□ 2.76
HLA-F-227ENST00000485513 DEFB129Q9H1M3 183 aa32.31■■■□□ 2.76
HLA-F-227ENST00000485513 SPDYE2BA6NHP3 402 aa32.3■■■□□ 2.76
HLA-F-227ENST00000485513 MYO1BO43795 1136 aa32.3■■■□□ 2.76
HLA-F-227ENST00000485513 SPDYE6P0CI01 402 aa32.3■■■□□ 2.76
HLA-F-227ENST00000485513 PRKG1Q13976 671 aa32.3■■■□□ 2.76
HLA-F-227ENST00000485513 SMC4Q9NTJ3 1288 aa32.3■■■□□ 2.76
HLA-F-227ENST00000485513 DGKZQ13574 1117 aa32.29■■■□□ 2.76
HLA-F-227ENST00000485513 LRRC24Q50LG9 513 aa32.29■■■□□ 2.76
HLA-F-227ENST00000485513 CCDC85CA6NKD9 419 aa32.28■■■□□ 2.76
HLA-F-227ENST00000485513 RBM5P52756 815 aaKnown RBP eCLIP32.28■■■□□ 2.76
HLA-F-227ENST00000485513 METTL24Q5JXM2 366 aa32.28■■■□□ 2.76
HLA-F-227ENST00000485513 MFSD14BQ5SR56 506 aa32.28■■■□□ 2.76
HLA-F-227ENST00000485513 TRMT2AQ8IZ69 625 aaKnown RBP32.28■■■□□ 2.76
HLA-F-227ENST00000485513 PRMT6Q96LA8 375 aaPredicted RBP32.28■■■□□ 2.76
HLA-F-227ENST00000485513 PPP2R3BQ9Y5P8 575 aa32.28■■■□□ 2.76
HLA-F-227ENST00000485513 CLRN2A0PK11 232 aa32.27■■■□□ 2.76
HLA-F-227ENST00000485513 PTPN12Q05209 780 aaKnown RBP32.27■■■□□ 2.76
HLA-F-227ENST00000485513 VPS37DQ86XT2 251 aa32.26■■■□□ 2.75
HLA-F-227ENST00000485513 ANGEL1Q9UNK9 670 aaKnown RBP32.26■■■□□ 2.75
HLA-F-227ENST00000485513 VEZTQ9HBM0 779 aa32.25■■■□□ 2.75
HLA-F-227ENST00000485513 ARAP2Q8WZ64 1704 aa32.24■■■□□ 2.75
HLA-F-227ENST00000485513 LDLRAD1Q5T700 205 aa32.24■■■□□ 2.75
HLA-F-227ENST00000485513 FBXO33Q7Z6M2 555 aa32.24■■■□□ 2.75
HLA-F-227ENST00000485513 KLHDC4Q8TBB5 520 aa32.24■■■□□ 2.75
HLA-F-227ENST00000485513 TTF2Q9UNY4 1162 aaKnown RBP32.24■■■□□ 2.75
HLA-F-227ENST00000485513 AOX1Q06278 1338 aa32.24■■■□□ 2.75
HLA-F-227ENST00000485513 CCER2I3L3R5 266 aa32.23■■■□□ 2.75
HLA-F-227ENST00000485513 PDE8BO95263 885 aa32.23■■■□□ 2.75
HLA-F-227ENST00000485513 CT47B1P0C2W7 299 aaPredicted RBP32.23■■■□□ 2.75
HLA-F-227ENST00000485513 MKRN3Q13064 507 aaKnown RBP32.23■■■□□ 2.75
HLA-F-227ENST00000485513 VGLL2Q8N8G2 317 aa32.23■■■□□ 2.75
HLA-F-227ENST00000485513 SERPINA10Q9UK55 444 aa32.23■■■□□ 2.75
HLA-F-227ENST00000485513 CAVIN4Q5BKX8 364 aa32.22■■■□□ 2.75
HLA-F-227ENST00000485513 FZD1Q9UP38 647 aa32.22■■■□□ 2.75
HLA-F-227ENST00000485513 TM4SF4P48230 202 aa32.21■■■□□ 2.75
HLA-F-227ENST00000485513 SUPT20HL1Q3ZLR7 823 aa32.21■■■□□ 2.75
HLA-F-227ENST00000485513 IQSEC3Q9UPP2 1182 aaPredicted RBP32.21■■■□□ 2.75
HLA-F-227ENST00000485513 SSC5DA1L4H1 1573 aa32.2■■■□□ 2.75
HLA-F-227ENST00000485513 PPP1R12BO60237 982 aaPredicted RBP32.2■■■□□ 2.75
HLA-F-227ENST00000485513 FRAT2O75474 233 aaPredicted RBP32.19■■■□□ 2.74
HLA-F-227ENST00000485513 CHAF1AQ13111 956 aaPredicted RBP32.19■■■□□ 2.74
HLA-F-227ENST00000485513 MAP3K11Q16584 847 aa32.19■■■□□ 2.74
HLA-F-227ENST00000485513 SREBF2Q12772 1141 aa32.18■■■□□ 2.74
HLA-F-227ENST00000485513 RASA3Q14644 834 aa32.18■■■□□ 2.74
HLA-F-227ENST00000485513 SPRYD7Q5W111 196 aa32.18■■■□□ 2.74
HLA-F-227ENST00000485513 NOB1Q9ULX3 412 aaKnown RBP32.18■■■□□ 2.74
HLA-F-227ENST00000485513 RFX5P48382 616 aaPredicted RBP32.17■■■□□ 2.74
HLA-F-227ENST00000485513 PUM3Q15397 648 aaKnown RBP32.17■■■□□ 2.74
HLA-F-227ENST00000485513 SPDYE2Q495Y8 402 aa32.17■■■□□ 2.74
HLA-F-227ENST00000485513 NBPF12Q5TAG4 269 aaPredicted RBP32.17■■■□□ 2.74
HLA-F-227ENST00000485513 TBC1D22AQ8WUA7 517 aa32.17■■■□□ 2.74
HLA-F-227ENST00000485513 SLC10A4Q96EP9 437 aa32.17■■■□□ 2.74
HLA-F-227ENST00000485513 ZNF70Q9UC06 446 aaPredicted RBP32.17■■■□□ 2.74
HLA-F-227ENST00000485513 TBC1D8O95759 1140 aa32.16■■■□□ 2.74
HLA-F-227ENST00000485513 CRKP46108 304 aa32.16■■■□□ 2.74
HLA-F-227ENST00000485513 TNFAIP1Q13829 316 aa32.16■■■□□ 2.74
HLA-F-227ENST00000485513 DZIP1LQ8IYY4 767 aaKnown RBP32.16■■■□□ 2.74
HLA-F-227ENST00000485513 TDRD3Q9H7E2 651 aaKnown RBP32.16■■■□□ 2.74
HLA-F-227ENST00000485513 EYA2O00167 538 aa32.15■■■□□ 2.74
HLA-F-227ENST00000485513 IFIT1P09914 478 aaKnown RBP32.15■■■□□ 2.74
HLA-F-227ENST00000485513 UBTFL1P0CB47 393 aaPredicted RBP32.15■■■□□ 2.74
HLA-F-227ENST00000485513 BCAMP50895 628 aa32.15■■■□□ 2.74
HLA-F-227ENST00000485513 API5Q9BZZ5 524 aaKnown RBP32.15■■■□□ 2.74
HLA-F-227ENST00000485513 FGFR2P21802 821 aa32.14■■■□□ 2.74
HLA-F-227ENST00000485513 GRIK5Q16478 980 aa32.14■■■□□ 2.74
HLA-F-227ENST00000485513 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.14■■■□□ 2.74
HLA-F-227ENST00000485513 KIF16BQ96L93 1317 aa32.14■■■□□ 2.74
HLA-F-227ENST00000485513 UNCXA6NJT0 531 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms