RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
UBA3-210ENST00000485424 TTLL5Q6EMB2 1281 aa16.79■□□□□ 0.28
UBA3-210ENST00000485424 SLC4A10Q6U841 1118 aa16.79■□□□□ 0.28
UBA3-210ENST00000485424 CTU1Q7Z7A3 348 aaKnown RBP16.79■□□□□ 0.28
UBA3-210ENST00000485424 KIAA0825Q8IV33 1275 aa16.79■□□□□ 0.28
UBA3-210ENST00000485424 C9orf78Q9NZ63 289 aaPredicted RBP16.79■□□□□ 0.28
UBA3-210ENST00000485424 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
UBA3-210ENST00000485424 SSC5DA1L4H1 1573 aa16.79■□□□□ 0.28
UBA3-210ENST00000485424 AK9Q5TCS8 1911 aa16.78■□□□□ 0.28
UBA3-210ENST00000485424 IRS2Q9Y4H2 1338 aa16.78■□□□□ 0.28
UBA3-210ENST00000485424 MMP14P50281 582 aa16.78■□□□□ 0.28
UBA3-210ENST00000485424 SOX10P56693 466 aa16.78■□□□□ 0.28
UBA3-210ENST00000485424 CHRNDQ07001 517 aa16.78■□□□□ 0.28
UBA3-210ENST00000485424 MKI67P46013 3256 aaKnown RBP16.77■□□□□ 0.28
UBA3-210ENST00000485424 NF2P35240 595 aa16.77■□□□□ 0.28
UBA3-210ENST00000485424 GTF2IP78347 998 aa16.77■□□□□ 0.28
UBA3-210ENST00000485424 CCDC57Q2TAC2 916 aa16.77■□□□□ 0.28
UBA3-210ENST00000485424 APOBEC3FQ8IUX4 373 aaKnown RBP16.77■□□□□ 0.28
UBA3-210ENST00000485424 ZBED3Q96IU2 234 aaPredicted RBP16.77■□□□□ 0.28
UBA3-210ENST00000485424 BRCA2P51587 3418 aa16.77■□□□□ 0.27
UBA3-210ENST00000485424 KIAA0100Q14667 2235 aaKnown RBP16.76■□□□□ 0.27
UBA3-210ENST00000485424 GRM8O00222 908 aa16.76■□□□□ 0.27
UBA3-210ENST00000485424 MKRN3Q13064 507 aaKnown RBP16.76■□□□□ 0.27
UBA3-210ENST00000485424 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
UBA3-210ENST00000485424 SNAP23O00161 211 aa16.75■□□□□ 0.27
UBA3-210ENST00000485424 TBC1D8O95759 1140 aa16.75■□□□□ 0.27
UBA3-210ENST00000485424 LMBR1LQ6UX01 489 aa16.75■□□□□ 0.27
UBA3-210ENST00000485424 ZNF296Q8WUU4 475 aaPredicted RBP16.75■□□□□ 0.27
UBA3-210ENST00000485424 SRCIN1Q9C0H9 1055 aa16.75■□□□□ 0.27
UBA3-210ENST00000485424 CD209Q9NNX6 404 aa16.75■□□□□ 0.27
UBA3-210ENST00000485424 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
UBA3-210ENST00000485424 PLIN1O60240 522 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 TAF5LO75529 589 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 TM4SF4P48230 202 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 FOXO4P98177 505 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
UBA3-210ENST00000485424 PRKG1Q13976 671 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 ZNF804AQ7Z570 1209 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
UBA3-210ENST00000485424 ZSWIM8A7E2V4 1837 aa16.73■□□□□ 0.27
UBA3-210ENST00000485424 LDHAL6AQ6ZMR3 332 aa16.73■□□□□ 0.27
UBA3-210ENST00000485424 C15orf52Q6ZUT6 534 aaKnown RBP16.73■□□□□ 0.27
UBA3-210ENST00000485424 ARMC9Q7Z3E5 817 aa16.73■□□□□ 0.27
UBA3-210ENST00000485424 HELBQ8NG08 1087 aaPredicted RBP16.73■□□□□ 0.27
UBA3-210ENST00000485424 FZD1Q9UP38 647 aa16.73■□□□□ 0.27
UBA3-210ENST00000485424 HPS5Q9UPZ3 1129 aa16.73■□□□□ 0.27
UBA3-210ENST00000485424 SREBF2Q12772 1141 aa16.72■□□□□ 0.27
UBA3-210ENST00000485424 NOM1Q5C9Z4 860 aaKnown RBP16.72■□□□□ 0.27
UBA3-210ENST00000485424 SP7Q8TDD2 431 aaPredicted RBP16.72■□□□□ 0.27
UBA3-210ENST00000485424 ANGEL1Q9UNK9 670 aaKnown RBP16.72■□□□□ 0.27
UBA3-210ENST00000485424 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
UBA3-210ENST00000485424 GPR25O00155 361 aa16.71■□□□□ 0.27
UBA3-210ENST00000485424 IL1R1P14778 569 aa16.71■□□□□ 0.27
UBA3-210ENST00000485424 DLGAP5Q15398 846 aa16.71■□□□□ 0.27
UBA3-210ENST00000485424 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
UBA3-210ENST00000485424 MTMR14Q8NCE2 650 aa16.71■□□□□ 0.27
UBA3-210ENST00000485424 CFHR5Q9BXR6 569 aa16.71■□□□□ 0.27
UBA3-210ENST00000485424 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
UBA3-210ENST00000485424 MYO1BO43795 1136 aa16.7■□□□□ 0.26
UBA3-210ENST00000485424 PKN2Q16513 984 aaKnown RBP16.7■□□□□ 0.26
UBA3-210ENST00000485424 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
UBA3-210ENST00000485424 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
UBA3-210ENST00000485424 ZNF594Q96JF6 807 aaPredicted RBP16.7■□□□□ 0.26
UBA3-210ENST00000485424 AOX1Q06278 1338 aa16.7■□□□□ 0.26
UBA3-210ENST00000485424 E9PSI1 815 aa16.69■□□□□ 0.26
UBA3-210ENST00000485424 F8W031 263 aaPredicted RBP16.69■□□□□ 0.26
UBA3-210ENST00000485424 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
UBA3-210ENST00000485424 R3HDMLQ9H3Y0 253 aa16.69■□□□□ 0.26
UBA3-210ENST00000485424 JAG2Q9Y219 1238 aa16.69■□□□□ 0.26
UBA3-210ENST00000485424 MGAMO43451 1857 aa16.69■□□□□ 0.26
UBA3-210ENST00000485424 DOCK2Q92608 1830 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 CLRN2A0PK11 232 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 FKBP1AP62942 108 aaKnown RBP16.68■□□□□ 0.26
UBA3-210ENST00000485424 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 PPP2R3BQ9Y5P8 575 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 MYH2Q9UKX2 1941 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 PTPRCP08575 1304 aa16.68■□□□□ 0.26
UBA3-210ENST00000485424 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBA3-210ENST00000485424 FBXO46Q6PJ61 603 aaPredicted RBP16.67■□□□□ 0.26
UBA3-210ENST00000485424 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
UBA3-210ENST00000485424 WNK4Q96J92 1243 aa16.67■□□□□ 0.26
UBA3-210ENST00000485424 CLMNQ96JQ2 1002 aa16.67■□□□□ 0.26
UBA3-210ENST00000485424 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
UBA3-210ENST00000485424 PTPRFP10586 1907 aa16.66■□□□□ 0.26
UBA3-210ENST00000485424 FKTNO75072 461 aa16.66■□□□□ 0.26
UBA3-210ENST00000485424 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
UBA3-210ENST00000485424 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
UBA3-210ENST00000485424 PRMT6Q96LA8 375 aaPredicted RBP16.66■□□□□ 0.26
UBA3-210ENST00000485424 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
UBA3-210ENST00000485424 MANSC4A6NHS7 340 aaPredicted RBP16.65■□□□□ 0.26
UBA3-210ENST00000485424 PPP1R12BO60237 982 aaPredicted RBP16.65■□□□□ 0.26
UBA3-210ENST00000485424 ALDH1A1P00352 501 aa16.65■□□□□ 0.26
UBA3-210ENST00000485424 UBE4AQ14139 1066 aa16.65■□□□□ 0.26
UBA3-210ENST00000485424 MRPL50Q8N5N7 158 aaKnown RBP16.65■□□□□ 0.26
UBA3-210ENST00000485424 SLC10A4Q96EP9 437 aa16.65■□□□□ 0.26
UBA3-210ENST00000485424 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
UBA3-210ENST00000485424 FAM205AQ6ZU69 1335 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms