RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 SUGCTQ9HAC7 445 aa8.36□□□□□ -1.07
RC3H1-205ENST00000484867 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
RC3H1-205ENST00000484867 PRNPP04156 253 aa8.35□□□□□ -1.07
RC3H1-205ENST00000484867 SGO2Q562F6 1265 aa8.35□□□□□ -1.07
RC3H1-205ENST00000484867 CBLL1Q75N03 491 aa8.35□□□□□ -1.07
RC3H1-205ENST00000484867 ZNF438Q7Z4V0 828 aa8.35□□□□□ -1.07
RC3H1-205ENST00000484867 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
RC3H1-205ENST00000484867 SHISA5Q8N114 240 aa8.35□□□□□ -1.07
RC3H1-205ENST00000484867 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
RC3H1-205ENST00000484867 GGNBP2Q9H3C7 697 aa8.35□□□□□ -1.07
RC3H1-205ENST00000484867 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
RC3H1-205ENST00000484867 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
RC3H1-205ENST00000484867 DLGAP3O95886 979 aa8.34□□□□□ -1.07
RC3H1-205ENST00000484867 FOSL1P15407 271 aa8.34□□□□□ -1.07
RC3H1-205ENST00000484867 C19orf57Q0VDD7 668 aa8.34□□□□□ -1.07
RC3H1-205ENST00000484867 FZD5Q13467 585 aa8.34□□□□□ -1.07
RC3H1-205ENST00000484867 FDX2Q6P4F2 183 aa8.34□□□□□ -1.07
RC3H1-205ENST00000484867 TMEM102Q8N9M5 508 aaPredicted RBP8.34□□□□□ -1.07
RC3H1-205ENST00000484867 NXPE3Q969Y0 559 aa8.34□□□□□ -1.07
RC3H1-205ENST00000484867 CES1P23141 567 aa8.33□□□□□ -1.08
RC3H1-205ENST00000484867 FAM177BA6PVY3 158 aa8.32□□□□□ -1.08
RC3H1-205ENST00000484867 RPLP1P05386 114 aaKnown RBP8.32□□□□□ -1.08
RC3H1-205ENST00000484867 COL19A1Q14993 1142 aa8.32□□□□□ -1.08
RC3H1-205ENST00000484867 CPSF6Q16630 551 aaKnown RBP eCLIP8.32□□□□□ -1.08
RC3H1-205ENST00000484867 SLC7A3Q8WY07 619 aa8.32□□□□□ -1.08
RC3H1-205ENST00000484867 CCDC39Q9UFE4 941 aa8.32□□□□□ -1.08
RC3H1-205ENST00000484867 LOC100289279A0A1B0GTE1 492 aa8.31□□□□□ -1.08
RC3H1-205ENST00000484867 GAS2O43903 313 aaKnown RBP8.3□□□□□ -1.08
RC3H1-205ENST00000484867 PDGFAP04085 211 aa8.3□□□□□ -1.08
RC3H1-205ENST00000484867 BSNDQ8WZ55 320 aa8.3□□□□□ -1.08
RC3H1-205ENST00000484867 EDEM1Q92611 657 aa8.3□□□□□ -1.08
RC3H1-205ENST00000484867 SOX17Q9H6I2 414 aaPredicted RBP8.3□□□□□ -1.08
RC3H1-205ENST00000484867 LEMD3Q9Y2U8 911 aa8.3□□□□□ -1.08
RC3H1-205ENST00000484867 A6NHS1 94 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 ARL4DP49703 201 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 C12orf50Q8NA57 414 aaPredicted RBP8.29□□□□□ -1.08
RC3H1-205ENST00000484867 HELQQ8TDG4 1101 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 GATA6Q92908 595 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 NRSN2Q9GZP1 204 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 ATG3Q9NT62 314 aa8.29□□□□□ -1.08
RC3H1-205ENST00000484867 ITGB5P18084 799 aa8.28□□□□□ -1.08
RC3H1-205ENST00000484867 ADMP35318 185 aa8.28□□□□□ -1.08
RC3H1-205ENST00000484867 IKBKEQ14164 716 aa8.28□□□□□ -1.08
RC3H1-205ENST00000484867 CDPF1Q6NVV7 123 aa8.28□□□□□ -1.08
RC3H1-205ENST00000484867 FBXL6Q8N531 539 aa8.28□□□□□ -1.08
RC3H1-205ENST00000484867 C2CD4AQ8NCU7 369 aaPredicted RBP8.28□□□□□ -1.08
RC3H1-205ENST00000484867 EZH1Q92800 747 aaPredicted RBP8.28□□□□□ -1.08
RC3H1-205ENST00000484867 OSMRQ99650 979 aa8.28□□□□□ -1.08
RC3H1-205ENST00000484867 BHLHE41Q9C0J9 482 aaPredicted RBP8.28□□□□□ -1.08
RC3H1-205ENST00000484867 FAM95CA0A1B0GW59 222 aa8.27□□□□□ -1.09
RC3H1-205ENST00000484867 DRD2P14416 443 aa8.27□□□□□ -1.09
RC3H1-205ENST00000484867 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
RC3H1-205ENST00000484867 MZF1P28698 734 aaPredicted RBP8.27□□□□□ -1.09
RC3H1-205ENST00000484867 JAG1P78504 1218 aa8.27□□□□□ -1.09
RC3H1-205ENST00000484867 DNM1Q05193 864 aaKnown RBP8.27□□□□□ -1.09
RC3H1-205ENST00000484867 OGFOD2Q6N063 350 aa8.27□□□□□ -1.09
RC3H1-205ENST00000484867 GIMAP7Q8NHV1 300 aa8.27□□□□□ -1.09
RC3H1-205ENST00000484867 OSBPL1AQ9BXW6 950 aa8.27□□□□□ -1.09
RC3H1-205ENST00000484867 EREGO14944 169 aa8.26□□□□□ -1.09
RC3H1-205ENST00000484867 ESRRAP11474 423 aaPredicted RBP8.26□□□□□ -1.09
RC3H1-205ENST00000484867 VSIG10LQ86VR7 867 aa8.26□□□□□ -1.09
RC3H1-205ENST00000484867 CYP4F12Q9HCS2 524 aa8.26□□□□□ -1.09
RC3H1-205ENST00000484867 NOM1Q5C9Z4 860 aaKnown RBP8.25□□□□□ -1.09
RC3H1-205ENST00000484867 EXOSC6Q5RKV6 272 aaKnown RBP8.25□□□□□ -1.09
RC3H1-205ENST00000484867 PEAR1Q5VY43 1037 aaPredicted RBP8.25□□□□□ -1.09
RC3H1-205ENST00000484867 POU5F2Q8N7G0 328 aa8.25□□□□□ -1.09
RC3H1-205ENST00000484867 FBLIM1Q8WUP2 373 aa8.25□□□□□ -1.09
RC3H1-205ENST00000484867 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
RC3H1-205ENST00000484867 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
RC3H1-205ENST00000484867 PRKAG2Q9UGJ0 569 aa8.25□□□□□ -1.09
RC3H1-205ENST00000484867 ANGEL1Q9UNK9 670 aaKnown RBP8.25□□□□□ -1.09
RC3H1-205ENST00000484867 RXRBP28702 533 aa8.24□□□□□ -1.09
RC3H1-205ENST00000484867 EIF1AXP47813 144 aaKnown RBP8.24□□□□□ -1.09
RC3H1-205ENST00000484867 PAOXQ6QHF9 649 aa8.24□□□□□ -1.09
RC3H1-205ENST00000484867 ZAR1Q86SH2 424 aa8.24□□□□□ -1.09
RC3H1-205ENST00000484867 METTL22Q9BUU2 404 aaPredicted RBP8.24□□□□□ -1.09
RC3H1-205ENST00000484867 TNFRSF21O75509 655 aa8.23□□□□□ -1.09
RC3H1-205ENST00000484867 SOX4Q06945 474 aaPredicted RBP8.23□□□□□ -1.09
RC3H1-205ENST00000484867 NFKBIBQ15653 356 aa8.23□□□□□ -1.09
RC3H1-205ENST00000484867 C8orf34Q49A92 452 aa8.23□□□□□ -1.09
RC3H1-205ENST00000484867 BSDC1Q9NW68 430 aaPredicted RBP8.23□□□□□ -1.09
RC3H1-205ENST00000484867 EDN3P14138 238 aa8.22□□□□□ -1.09
RC3H1-205ENST00000484867 PCSK2P16519 638 aa8.22□□□□□ -1.09
RC3H1-205ENST00000484867 NPR3P17342 541 aa8.22□□□□□ -1.09
RC3H1-205ENST00000484867 MPSTP25325 297 aa8.22□□□□□ -1.09
RC3H1-205ENST00000484867 PBXIP1Q96AQ6 731 aa8.22□□□□□ -1.09
RC3H1-205ENST00000484867 PAK6Q9NQU5 681 aaPredicted RBP8.22□□□□□ -1.09
RC3H1-205ENST00000484867 LATS2Q9NRM7 1088 aa8.22□□□□□ -1.09
RC3H1-205ENST00000484867 FAM170BA6NMN3 283 aa8.21□□□□□ -1.1
RC3H1-205ENST00000484867 CYP26A1O43174 497 aa8.21□□□□□ -1.1
RC3H1-205ENST00000484867 POLIQ9UNA4 740 aa8.21□□□□□ -1.1
RC3H1-205ENST00000484867 C8AP07357 584 aa8.2□□□□□ -1.1
RC3H1-205ENST00000484867 USP11P51784 963 aa8.2□□□□□ -1.1
RC3H1-205ENST00000484867 PHACTR2O75167 634 aa8.19□□□□□ -1.1
RC3H1-205ENST00000484867 CTSBP07858 339 aa8.19□□□□□ -1.1
RC3H1-205ENST00000484867 ADH5P11766 374 aa8.19□□□□□ -1.1
RC3H1-205ENST00000484867 JUNBP17275 347 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms