RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 EGFRP00533 1210 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 CSF1RP07333 972 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 HSPA6P17066 643 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 EPHX2P34913 555 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 MAP1SQ66K74 1059 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-216ENST00000484087 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 GPC2Q8N158 579 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 ANKRD44Q8N8A2 993 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 SUPT20HQ8NEM7 779 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
BRCA1-216ENST00000484087 GCC1Q96CN9 775 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 L3MBTL3Q96JM7 780 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-216ENST00000484087 CDC5LQ99459 802 aaKnown RBP8.58□□□□□ -1.04
BRCA1-216ENST00000484087 BACH2Q9BYV9 841 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 HACL1Q9UJ83 578 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 GGA1Q9UJY5 639 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 ZNRF3Q9ULT6 936 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 XDHP47989 1333 aa8.58□□□□□ -1.04
BRCA1-216ENST00000484087 ANKRD18BA2A2Z9 1011 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 ALDH1L1O75891 902 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 IGHMBP2P38935 993 aaKnown RBP8.57□□□□□ -1.04
BRCA1-216ENST00000484087 CHRNDQ07001 517 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 CIAPIN1Q6FI81 312 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 MEIS3Q99687 375 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 USP44Q9H0E7 712 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 JAG2Q9Y219 1238 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 POLR2AP24928 1970 aaKnown RBP8.57□□□□□ -1.04
BRCA1-216ENST00000484087 IFIT5Q13325 482 aaKnown RBP8.57□□□□□ -1.04
BRCA1-216ENST00000484087 LRRC24Q50LG9 513 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 RPAP2Q8IXW5 612 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-216ENST00000484087 SMC5Q8IY18 1101 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 SMC1BQ8NDV3 1235 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 RNF25Q96BH1 459 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-216ENST00000484087 MPHOSPH8Q99549 860 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 BSDC1Q9NW68 430 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-216ENST00000484087 PODXL2Q9NZ53 605 aa8.57□□□□□ -1.04
BRCA1-216ENST00000484087 SCAF8Q9UPN6 1271 aaKnown RBP8.57□□□□□ -1.04
BRCA1-216ENST00000484087 MYH13Q9UKX3 1938 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 UTYO14607 1347 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 ASTN2O75129 1339 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-216ENST00000484087 IQCA1LA6NCM1 817 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 TRAF5O00463 557 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
BRCA1-216ENST00000484087 HMMRO75330 724 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 GNAI3P08754 354 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 HSP90B1P14625 803 aaKnown RBP8.56□□□□□ -1.04
BRCA1-216ENST00000484087 TAF7LQ5H9L4 462 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 SAMD7Q7Z3H4 446 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 MARVELD3Q96A59 401 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 EYA3Q99504 573 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 ZC3H12CQ9C0D7 883 aaKnown RBP8.56□□□□□ -1.04
BRCA1-216ENST00000484087 GPRC5DQ9NZD1 345 aa8.56□□□□□ -1.04
BRCA1-216ENST00000484087 TRPM7Q96QT4 1865 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 MED23Q9ULK4 1368 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 ZNF804BA4D1E1 1349 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 IRS2Q9Y4H2 1338 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 SNPHO15079 494 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 ATP2B4P23634 1241 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 LMOD1P29536 600 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-216ENST00000484087 HIRAP54198 1017 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-216ENST00000484087 CCDC57Q2TAC2 916 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 TBC1D10BQ4KMP7 808 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-216ENST00000484087 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
BRCA1-216ENST00000484087 CNNM1Q9NRU3 951 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
BRCA1-216ENST00000484087 LRRFIP2Q9Y608 721 aaKnown RBP8.55□□□□□ -1.04
BRCA1-216ENST00000484087 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
BRCA1-216ENST00000484087 G3V3G9 751 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 KCNJ4P48050 445 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 FSTL1Q12841 308 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 RABL6Q3YEC7 729 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-216ENST00000484087 LDHAL6AQ6ZMR3 332 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 LDHDQ86WU2 507 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 SKAP1Q86WV1 359 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 SIL1Q9H173 461 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 CNOT7Q9UIV1 285 aaKnown RBP8.54□□□□□ -1.04
BRCA1-216ENST00000484087 PCDHB8Q9UN66 801 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 PA2G4Q9UQ80 394 aaKnown RBP8.54□□□□□ -1.04
BRCA1-216ENST00000484087 HDAC5Q9UQL6 1122 aa8.54□□□□□ -1.04
BRCA1-216ENST00000484087 GNAI2P04899 355 aa8.53□□□□□ -1.04
BRCA1-216ENST00000484087 RFX5P48382 616 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-216ENST00000484087 NUCB1Q02818 461 aa8.53□□□□□ -1.04
BRCA1-216ENST00000484087 GLIS2Q9BZE0 524 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-216ENST00000484087 IQSEC3Q9UPP2 1182 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-216ENST00000484087 PCDHAC2Q9Y5I4 1007 aa8.53□□□□□ -1.04
BRCA1-216ENST00000484087 PASKQ96RG2 1323 aa8.53□□□□□ -1.04
BRCA1-216ENST00000484087 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-216ENST00000484087 UBTFL1P0CB47 393 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-216ENST00000484087 GYG1P46976 350 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 APLP1P51693 650 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 TNIP1Q15025 636 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 ANKRD45Q5TZF3 282 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 ERICH6Q7L0X2 663 aa8.52□□□□□ -1.05
BRCA1-216ENST00000484087 CHD1LQ86WJ1 897 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms