RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 PI4K2BQ8TCG2 481 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 RAD50Q92878 1312 aa12.9□□□□□ -0.34
EWSR1-217ENST00000483415 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
EWSR1-217ENST00000483415 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
EWSR1-217ENST00000483415 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
EWSR1-217ENST00000483415 LTBP3Q9NS15 1303 aa12.89□□□□□ -0.35
EWSR1-217ENST00000483415 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
EWSR1-217ENST00000483415 FKBP1AP62942 108 aaKnown RBP12.89□□□□□ -0.35
EWSR1-217ENST00000483415 TFCP2Q12800 502 aa12.89□□□□□ -0.35
EWSR1-217ENST00000483415 SUPT20HQ8NEM7 779 aa12.89□□□□□ -0.35
EWSR1-217ENST00000483415 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
EWSR1-217ENST00000483415 PA2G4Q9UQ80 394 aaKnown RBP12.89□□□□□ -0.35
EWSR1-217ENST00000483415 H0YIN7 160 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 VGLL3A8MV65 326 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
EWSR1-217ENST00000483415 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
EWSR1-217ENST00000483415 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 EAF2Q96CJ1 260 aaPredicted RBP12.88□□□□□ -0.35
EWSR1-217ENST00000483415 HAUS7Q99871 368 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 K7ELQ4 463 aaPredicted RBP12.88□□□□□ -0.35
EWSR1-217ENST00000483415 CHRNDQ07001 517 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
EWSR1-217ENST00000483415 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
EWSR1-217ENST00000483415 EVI5LQ96CN4 794 aa12.87□□□□□ -0.35
EWSR1-217ENST00000483415 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
EWSR1-217ENST00000483415 TTF1Q15361 905 aaPredicted RBP12.87□□□□□ -0.35
EWSR1-217ENST00000483415 AACSQ86V21 672 aa12.87□□□□□ -0.35
EWSR1-217ENST00000483415 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 CCDC158Q5M9N0 1113 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 IL17RAQ96F46 866 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 PTGER2P43116 358 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 CNTROBQ8N137 903 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 DBNLQ9UJU6 430 aaKnown RBP12.86□□□□□ -0.35
EWSR1-217ENST00000483415 KIAA2012Q0VF49 1180 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 FBXO33Q7Z6M2 555 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
EWSR1-217ENST00000483415 PSMD1Q99460 953 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 SEC31BQ9NQW1 1179 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 SUGT1Q9Y2Z0 365 aa12.86□□□□□ -0.35
EWSR1-217ENST00000483415 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.86□□□□□ -0.359e-7■■□□□ 12.4
EWSR1-217ENST00000483415 NPHP1O15259 732 aa12.85□□□□□ -0.35
EWSR1-217ENST00000483415 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
EWSR1-217ENST00000483415 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
EWSR1-217ENST00000483415 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
EWSR1-217ENST00000483415 ZFYP08048 801 aaPredicted RBP12.85□□□□□ -0.35
EWSR1-217ENST00000483415 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
EWSR1-217ENST00000483415 EYA3Q99504 573 aa12.85□□□□□ -0.35
EWSR1-217ENST00000483415 PUS3Q9BZE2 481 aaKnown RBP12.85□□□□□ -0.35
EWSR1-217ENST00000483415 RPAP1Q9BWH6 1393 aaPredicted RBP12.85□□□□□ -0.35
EWSR1-217ENST00000483415 CDC45O75419 566 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
EWSR1-217ENST00000483415 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 LAMB1P07942 1786 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 CASC1Q6TDU7 716 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 XAGE2Q96GT9 111 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
EWSR1-217ENST00000483415 IL1R1P14778 569 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 ANKRD7Q92527 254 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 TMX4Q9H1E5 349 aaPredicted RBP12.84□□□□□ -0.35
EWSR1-217ENST00000483415 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
EWSR1-217ENST00000483415 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 ZSCAN25Q6NSZ9 544 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
EWSR1-217ENST00000483415 DENND2AQ9ULE3 1009 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 DDX60LQ5H9U9 1706 aaKnown RBP12.83□□□□□ -0.36
EWSR1-217ENST00000483415 GSPT1P15170 499 aaKnown RBP12.83□□□□□ -0.36
EWSR1-217ENST00000483415 NT5C2P49902 561 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 PIBF1Q8WXW3 757 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
EWSR1-217ENST00000483415 CHD4Q14839 1912 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 TIAM2Q8IVF5 1701 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
EWSR1-217ENST00000483415 CAVIN4Q5BKX8 364 aa12.83□□□□□ -0.36
EWSR1-217ENST00000483415 CGNQ9P2M7 1197 aaKnown RBP12.83□□□□□ -0.36
EWSR1-217ENST00000483415 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 SBF1O95248 1867 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 SMARCA5O60264 1052 aaPredicted RBP12.82□□□□□ -0.36
EWSR1-217ENST00000483415 SLC20A2Q08357 652 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 SIL1Q9H173 461 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 GGA1Q9UJY5 639 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 MYO5AQ9Y4I1 1855 aaKnown RBP12.82□□□□□ -0.36
EWSR1-217ENST00000483415 TMEM63CQ9P1W3 806 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
EWSR1-217ENST00000483415 KCNA3P22001 575 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms