RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PI16Q6UXB8 463 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 USP17L1Q7RTZ2 530 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 KDM2BQ8NHM5 1336 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 SCARF1Q14162 830 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 ERICH6BQ5W0A0 696 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 DPY19L2Q6NUT2 758 aa21.85■■□□□ 1.09
CPNE1-224ENST00000483359 NUCB1Q02818 461 aa21.84■■□□□ 1.09
CPNE1-224ENST00000483359 CHD1LQ86WJ1 897 aa21.84■■□□□ 1.09
CPNE1-224ENST00000483359 GPC2Q8N158 579 aa21.84■■□□□ 1.09
CPNE1-224ENST00000483359 PPP4R2Q9NY27 417 aa21.84■■□□□ 1.09
CPNE1-224ENST00000483359 GLTPD2A6NH11 291 aa21.83■■□□□ 1.09
CPNE1-224ENST00000483359 MCAMP43121 646 aa21.83■■□□□ 1.09
CPNE1-224ENST00000483359 TNIP1Q15025 636 aa21.83■■□□□ 1.09
CPNE1-224ENST00000483359 SNRKQ9NRH2 765 aa21.83■■□□□ 1.09
CPNE1-224ENST00000483359 ARID4AP29374 1257 aaPredicted RBP21.83■■□□□ 1.08
CPNE1-224ENST00000483359 DACT2Q5SW24 774 aa21.83■■□□□ 1.08
CPNE1-224ENST00000483359 STRIP1Q5VSL9 837 aa21.83■■□□□ 1.08
CPNE1-224ENST00000483359 NDUFB9Q9Y6M9 179 aa21.83■■□□□ 1.08
CPNE1-224ENST00000483359 YY1P25490 414 aa21.82■■□□□ 1.08
CPNE1-224ENST00000483359 CENPQQ7L2Z9 268 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-224ENST00000483359 UQCRFS1P1P0C7P4 283 aa21.81■■□□□ 1.08
CPNE1-224ENST00000483359 MFSD14BQ5SR56 506 aa21.81■■□□□ 1.08
CPNE1-224ENST00000483359 HMG20BQ9P0W2 317 aa21.81■■□□□ 1.08
CPNE1-224ENST00000483359 DENND2AQ9ULE3 1009 aa21.81■■□□□ 1.08
CPNE1-224ENST00000483359 VIL1P09327 827 aaKnown RBP21.81■■□□□ 1.08
CPNE1-224ENST00000483359 GMPSP49915 693 aaPredicted RBP21.81■■□□□ 1.08
CPNE1-224ENST00000483359 RSBN1LQ6PCB5 846 aaPredicted RBP21.81■■□□□ 1.08
CPNE1-224ENST00000483359 CERS5Q8N5B7 392 aa21.81■■□□□ 1.08
CPNE1-224ENST00000483359 FAM205AQ6ZU69 1335 aa21.8■■□□□ 1.08
CPNE1-224ENST00000483359 F8W031 263 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-224ENST00000483359 SEMA3EO15041 775 aa21.8■■□□□ 1.08
CPNE1-224ENST00000483359 SPATA5Q8NB90 893 aa21.8■■□□□ 1.08
CPNE1-224ENST00000483359 MX1P20591 662 aa21.79■■□□□ 1.08
CPNE1-224ENST00000483359 ECHDC1Q9NTX5 307 aa21.79■■□□□ 1.08
CPNE1-224ENST00000483359 SHTN1A0MZ66 631 aa21.79■■□□□ 1.08
CPNE1-224ENST00000483359 KIAA0825Q8IV33 1275 aa21.79■■□□□ 1.08
CPNE1-224ENST00000483359 GPATCH3Q96I76 525 aa21.79■■□□□ 1.08
CPNE1-224ENST00000483359 BOLA2Q9H3K6 86 aa21.79■■□□□ 1.08
CPNE1-224ENST00000483359 AKAP11Q9UKA4 1901 aa21.79■■□□□ 1.08
CPNE1-224ENST00000483359 SCNN1DP51172 638 aa21.78■■□□□ 1.08
CPNE1-224ENST00000483359 GRIK5Q16478 980 aa21.78■■□□□ 1.08
CPNE1-224ENST00000483359 DNAJC2Q99543 621 aaKnown RBP21.78■■□□□ 1.08
CPNE1-224ENST00000483359 ZAP70P43403 619 aa21.78■■□□□ 1.08
CPNE1-224ENST00000483359 TBC1D9Q6ZT07 1266 aa21.78■■□□□ 1.08
CPNE1-224ENST00000483359 ABCF2Q9UG63 623 aa21.78■■□□□ 1.08
CPNE1-224ENST00000483359 SKAP1Q86WV1 359 aa21.77■■□□□ 1.08
CPNE1-224ENST00000483359 WDR66Q8TBY9 1149 aa21.77■■□□□ 1.08
CPNE1-224ENST00000483359 ZNF512BQ96KM6 892 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-224ENST00000483359 SALL3Q9BXA9 1300 aa21.77■■□□□ 1.08
CPNE1-224ENST00000483359 TBC1D22AQ8WUA7 517 aa21.76■■□□□ 1.07
CPNE1-224ENST00000483359 MYO3BQ8WXR4 1341 aa21.76■■□□□ 1.07
CPNE1-224ENST00000483359 PRDX5P30044 214 aa21.76■■□□□ 1.07
CPNE1-224ENST00000483359 MICALL2Q8IY33 904 aa21.76■■□□□ 1.07
CPNE1-224ENST00000483359 AGBL3Q8NEM8 1001 aa21.76■■□□□ 1.07
CPNE1-224ENST00000483359 NMRK2Q9NPI5 230 aa21.76■■□□□ 1.07
CPNE1-224ENST00000483359 WDR90Q96KV7 1748 aa21.75■■□□□ 1.07
CPNE1-224ENST00000483359 ATP5JP18859 108 aa21.75■■□□□ 1.07
CPNE1-224ENST00000483359 RPS12P25398 132 aaKnown RBP21.75■■□□□ 1.07
CPNE1-224ENST00000483359 PDE4AP27815 886 aa21.75■■□□□ 1.07
CPNE1-224ENST00000483359 LMOD1P29536 600 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-224ENST00000483359 EPS15P42566 896 aa21.75■■□□□ 1.07
CPNE1-224ENST00000483359 EDC3Q96F86 508 aaKnown RBP21.75■■□□□ 1.07
CPNE1-224ENST00000483359 L3MBTL3Q96JM7 780 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-224ENST00000483359 CYP2E1P05181 493 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-224ENST00000483359 GMLQ99445 158 aa21.74■■□□□ 1.07
CPNE1-224ENST00000483359 ANTXR1Q9H6X2 564 aa21.74■■□□□ 1.07
CPNE1-224ENST00000483359 RRAGCQ9HB90 399 aa21.74■■□□□ 1.07
CPNE1-224ENST00000483359 GPRC5DQ9NZD1 345 aa21.74■■□□□ 1.07
CPNE1-224ENST00000483359 PDS5AQ29RF7 1337 aaKnown RBP21.74■■□□□ 1.07
CPNE1-224ENST00000483359 TTC41PQ6P2S7 1318 aa21.74■■□□□ 1.07
CPNE1-224ENST00000483359 MAP4K4O95819 1239 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-224ENST00000483359 PDE1AP54750 535 aa21.74■■□□□ 1.07
CPNE1-224ENST00000483359 PI4K2BQ8TCG2 481 aa21.74■■□□□ 1.07
CPNE1-224ENST00000483359 CNOT7Q9UIV1 285 aaKnown RBP21.74■■□□□ 1.07
CPNE1-224ENST00000483359 TTF2Q9UNY4 1162 aaKnown RBP21.74■■□□□ 1.07
CPNE1-224ENST00000483359 GOLIM4O00461 696 aa21.73■■□□□ 1.07
CPNE1-224ENST00000483359 USP17L8P0C7I0 530 aa21.73■■□□□ 1.07
CPNE1-224ENST00000483359 ADAMTSL1Q8N6G6 1762 aa21.73■■□□□ 1.07
CPNE1-224ENST00000483359 GPBP1L1Q9HC44 474 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-224ENST00000483359 SALL1Q9NSC2 1324 aa21.72■■□□□ 1.07
CPNE1-224ENST00000483359 FKBP1AP62942 108 aaKnown RBP21.72■■□□□ 1.07
CPNE1-224ENST00000483359 PLEKHM2Q8IWE5 1019 aa21.72■■□□□ 1.07
CPNE1-224ENST00000483359 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.72■■□□□ 1.07
CPNE1-224ENST00000483359 DPF2Q92785 391 aa21.72■■□□□ 1.07
CPNE1-224ENST00000483359 POTECB2RU33 542 aa21.72■■□□□ 1.07
CPNE1-224ENST00000483359 ERC2O15083 957 aa21.72■■□□□ 1.07
CPNE1-224ENST00000483359 LDHBP07195 334 aaKnown RBP21.72■■□□□ 1.07
CPNE1-224ENST00000483359 RBM26Q5T8P6 1007 aaKnown RBP21.72■■□□□ 1.07
CPNE1-224ENST00000483359 OGFOD1Q8N543 542 aa21.72■■□□□ 1.07
CPNE1-224ENST00000483359 PIH1D3Q9NQM4 214 aaKnown RBP21.72■■□□□ 1.07
CPNE1-224ENST00000483359 HACL1Q9UJ83 578 aa21.72■■□□□ 1.07
CPNE1-224ENST00000483359 MYO5AQ9Y4I1 1855 aaKnown RBP21.72■■□□□ 1.07
CPNE1-224ENST00000483359 SCN4AP35499 1836 aa21.71■■□□□ 1.07
CPNE1-224ENST00000483359 ZBTB22O15209 634 aa21.71■■□□□ 1.07
CPNE1-224ENST00000483359 EGFRP00533 1210 aa21.71■■□□□ 1.07
CPNE1-224ENST00000483359 SAMD7Q7Z3H4 446 aa21.71■■□□□ 1.07
CPNE1-224ENST00000483359 ZGPATQ8N5A5 531 aaKnown RBP21.71■■□□□ 1.07
CPNE1-224ENST00000483359 HAUS7Q99871 368 aa21.71■■□□□ 1.07
CPNE1-224ENST00000483359 RAI14Q9P0K7 980 aa21.71■■□□□ 1.07
CPNE1-224ENST00000483359 LRP2BPQ9P2M1 347 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms