RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 ATP2B3Q16720 1220 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 DALRD3Q5D0E6 543 aaKnown RBP5.65□□□□□ -1.5
HDAC9-224ENST00000483142 TAF7LQ5H9L4 462 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 PELP1Q8IZL8 1130 aaKnown RBP5.65□□□□□ -1.5
HDAC9-224ENST00000483142 TBC1D16Q8TBP0 767 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 CCDC85AQ96PX6 553 aaPredicted RBP5.65□□□□□ -1.5
HDAC9-224ENST00000483142 MPHOSPH8Q99549 860 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 LRRCC1Q9C099 1032 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 OSBPL3Q9H4L5 887 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 DBNLQ9UJU6 430 aaKnown RBP5.65□□□□□ -1.5
HDAC9-224ENST00000483142 LEMD3Q9Y2U8 911 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 CHMP3Q9Y3E7 222 aa5.65□□□□□ -1.5
HDAC9-224ENST00000483142 AK9Q5TCS8 1911 aa5.65□□□□□ -1.51
HDAC9-224ENST00000483142 TTC41PQ6P2S7 1318 aa5.65□□□□□ -1.51
HDAC9-224ENST00000483142 ZC3H4Q9UPT8 1303 aaKnown RBP5.65□□□□□ -1.51
HDAC9-224ENST00000483142 ECM29Q5VYK3 1845 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 A0A0G2JLW4 131 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 A0A1B0GUL7 405 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 GPSM2P81274 684 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 FOXK1P85037 733 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 FKBP4Q02790 459 aaKnown RBP eCLIP5.64□□□□□ -1.51
HDAC9-224ENST00000483142 KIAA2012Q0VF49 1180 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 TFCP2Q12800 502 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 G3BP1Q13283 466 aaKnown RBP eCLIP5.64□□□□□ -1.51
HDAC9-224ENST00000483142 METTL24Q5JXM2 366 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 TMEM92Q6UXU6 159 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 CHD1LQ86WJ1 897 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 RTKN2Q8IZC4 609 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 CLASRPQ8N2M8 674 aaKnown RBP5.64□□□□□ -1.51
HDAC9-224ENST00000483142 SUPT20HQ8NEM7 779 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 LPIN2Q92539 896 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 EAF2Q96CJ1 260 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-224ENST00000483142 CCDC136Q96JN2 1154 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 SIL1Q9H173 461 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 CNNM1Q9NRU3 951 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 CEP126Q9P2H0 1117 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 STAP2Q9UGK3 403 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 AKAP2Q9Y2D5 859 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 WDR90Q96KV7 1748 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 SALL1Q9NSC2 1324 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 ADAMTSL1Q8N6G6 1762 aa5.64□□□□□ -1.51
HDAC9-224ENST00000483142 FOCADQ5VW36 1801 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 CCDC88AQ3V6T2 1871 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 POTEFA5A3E0 1075 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 HAX1O00165 279 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 UFL1O94874 794 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 IFIT1P09914 478 aaKnown RBP5.63□□□□□ -1.51
HDAC9-224ENST00000483142 SLC5A1P13866 664 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 YBX3P16989 372 aaKnown RBP eCLIP5.63□□□□□ -1.51
HDAC9-224ENST00000483142 KLRK1P26718 216 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 IER5LQ5T953 404 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 B4GALNT3Q6L9W6 998 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 DPP8Q6V1X1 898 aaPredicted RBP5.63□□□□□ -1.51
HDAC9-224ENST00000483142 TICAM2Q86XR7 235 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 MPNDQ8N594 471 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 PI4K2BQ8TCG2 481 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 ZNF622Q969S3 477 aaKnown RBP eCLIP5.63□□□□□ -1.51
HDAC9-224ENST00000483142 EYA3Q99504 573 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 DBNDD2Q9BQY9 259 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 TAOK3Q9H2K8 898 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 TLR7Q9NYK1 1049 aaKnown RBP5.63□□□□□ -1.51
HDAC9-224ENST00000483142 PPP1R1BQ9UD71 204 aaPredicted RBP5.63□□□□□ -1.51
HDAC9-224ENST00000483142 POLLQ9UGP5 575 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 GGA1Q9UJY5 639 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 FAM205AQ6ZU69 1335 aa5.63□□□□□ -1.51
HDAC9-224ENST00000483142 C21orf2O43822 256 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 IL1R1P14778 569 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 MX1P20591 662 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 ADORA1P30542 326 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 FKBP1AP62942 108 aaKnown RBP5.62□□□□□ -1.51
HDAC9-224ENST00000483142 OS9Q13438 667 aaPredicted RBP5.62□□□□□ -1.51
HDAC9-224ENST00000483142 TMED8Q6PL24 325 aaPredicted RBP5.62□□□□□ -1.51
HDAC9-224ENST00000483142 OLFM4Q6UX06 510 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 FBXO33Q7Z6M2 555 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 AACSQ86V21 672 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 COA1Q9GZY4 146 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 OCEL1Q9H607 264 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 IL1RAPL2Q9NP60 686 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 ECHDC1Q9NTX5 307 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 GTF3C3Q9Y5Q9 886 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 LAMB1P07942 1786 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 SCN4AP35499 1836 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 LAMA4Q16363 1823 aa5.62□□□□□ -1.51
HDAC9-224ENST00000483142 MYO5AQ9Y4I1 1855 aaKnown RBP5.62□□□□□ -1.51
HDAC9-224ENST00000483142 DPYSL4O14531 572 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 GPR37O15354 613 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 TAF5LO75529 589 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 GLRX3O76003 335 aaKnown RBP5.61□□□□□ -1.51
HDAC9-224ENST00000483142 UQCRFS1P1P0C7P4 283 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 ATP5JP18859 108 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 IARSP41252 1262 aaKnown RBP5.61□□□□□ -1.51
HDAC9-224ENST00000483142 PHKA1P46020 1223 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 PRELPP51888 382 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 PDE1AP54750 535 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 RASGRF1Q13972 1273 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 TMEM132AQ24JP5 1023 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 BMP2KLQ5H9B9 411 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 RBM26Q5T8P6 1007 aaKnown RBP5.61□□□□□ -1.51
HDAC9-224ENST00000483142 CCDC102BQ68D86 513 aa5.61□□□□□ -1.51
HDAC9-224ENST00000483142 ZNF804AQ7Z570 1209 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms