RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 VCANP13611 3396 aa11.67□□□□□ -0.54
HLA-B-253ENST00000481849 NUP98P52948 1817 aa11.67□□□□□ -0.54
HLA-B-253ENST00000481849 DICER1Q9UPY3 1922 aaKnown RBP11.66□□□□□ -0.54
HLA-B-253ENST00000481849 BBOX1O75936 387 aa11.66□□□□□ -0.54
HLA-B-253ENST00000481849 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.54
HLA-B-253ENST00000481849 GRAPQ13588 217 aa11.66□□□□□ -0.54
HLA-B-253ENST00000481849 SP8Q8IXZ3 490 aa11.66□□□□□ -0.54
HLA-B-253ENST00000481849 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
HLA-B-253ENST00000481849 GRAPLQ8TC17 118 aaPredicted RBP11.66□□□□□ -0.54
HLA-B-253ENST00000481849 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
HLA-B-253ENST00000481849 RAD17O75943 681 aa11.65□□□□□ -0.54
HLA-B-253ENST00000481849 HOXB7P09629 217 aa11.65□□□□□ -0.54
HLA-B-253ENST00000481849 MAP2K1Q02750 393 aaPredicted RBP11.65□□□□□ -0.54
HLA-B-253ENST00000481849 CXCL9Q07325 125 aa11.65□□□□□ -0.54
HLA-B-253ENST00000481849 Q6ZNB5 142 aa11.65□□□□□ -0.54
HLA-B-253ENST00000481849 ISCA1Q9BUE6 129 aa11.65□□□□□ -0.54
HLA-B-253ENST00000481849 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
HLA-B-253ENST00000481849 ZNRF3Q9ULT6 936 aa11.65□□□□□ -0.54
HLA-B-253ENST00000481849 ABT1Q9ULW3 272 aaKnown RBP11.65□□□□□ -0.54
HLA-B-253ENST00000481849 GMPSP49915 693 aaPredicted RBP11.64□□□□□ -0.55
HLA-B-253ENST00000481849 GRM1Q13255 1194 aa11.64□□□□□ -0.55
HLA-B-253ENST00000481849 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
HLA-B-253ENST00000481849 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
HLA-B-253ENST00000481849 RTFDC1Q9BY42 306 aaPredicted RBP11.64□□□□□ -0.55
HLA-B-253ENST00000481849 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
HLA-B-253ENST00000481849 TRAF5O00463 557 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
HLA-B-253ENST00000481849 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 GNAI1P63096 354 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 KIAA2012Q0VF49 1180 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 DEFB115Q30KQ5 88 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 CIAPIN1Q6FI81 312 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 USP50Q70EL3 339 aaPredicted RBP11.63□□□□□ -0.55
HLA-B-253ENST00000481849 ZNF516Q92618 1163 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 MYD88Q99836 296 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 GPRC5DQ9NZD1 345 aa11.63□□□□□ -0.55
HLA-B-253ENST00000481849 PTGDRQ13258 359 aa11.62□□□□□ -0.55
HLA-B-253ENST00000481849 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
HLA-B-253ENST00000481849 JARID2Q92833 1246 aaPredicted RBP11.62□□□□□ -0.55
HLA-B-253ENST00000481849 BCL2L13Q9BXK5 485 aa11.62□□□□□ -0.55
HLA-B-253ENST00000481849 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
HLA-B-253ENST00000481849 ADARB2Q9NS39 739 aaKnown RBP11.62□□□□□ -0.55
HLA-B-253ENST00000481849 NSFL1CQ9UNZ2 370 aaKnown RBP11.62□□□□□ -0.55
HLA-B-253ENST00000481849 LTBP1Q14766 1721 aa11.62□□□□□ -0.55
HLA-B-253ENST00000481849 SCN4AP35499 1836 aa11.62□□□□□ -0.55
HLA-B-253ENST00000481849 SHTN1A0MZ66 631 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 YDJCA8MPS7 323 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 GPSM2P81274 684 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
HLA-B-253ENST00000481849 DGKZQ13574 1117 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 TNIP1Q15025 636 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 SF3B3Q15393 1217 aaKnown RBP11.61□□□□□ -0.55
HLA-B-253ENST00000481849 CCDC184Q52MB2 194 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 PPP1R18Q6NYC8 613 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 GPR101Q96P66 508 aaPredicted RBP11.61□□□□□ -0.55
HLA-B-253ENST00000481849 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
HLA-B-253ENST00000481849 DBNDD1Q9H9R9 158 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 ADAMTSL1Q8N6G6 1762 aa11.61□□□□□ -0.55
HLA-B-253ENST00000481849 SPTBN5Q9NRC6 3674 aaKnown RBP11.61□□□□□ -0.55
HLA-B-253ENST00000481849 RASSF10A6NK89 507 aa11.6□□□□□ -0.55
HLA-B-253ENST00000481849 COPS2P61201 443 aa11.6□□□□□ -0.55
HLA-B-253ENST00000481849 WASHC4Q2M389 1173 aa11.6□□□□□ -0.55
HLA-B-253ENST00000481849 TMC4Q7Z404 712 aa11.6□□□□□ -0.55
HLA-B-253ENST00000481849 TSR2Q969E8 191 aaKnown RBP11.6□□□□□ -0.55
HLA-B-253ENST00000481849 SNX27Q96L92 541 aa11.6□□□□□ -0.55
HLA-B-253ENST00000481849 GLIS2Q9BZE0 524 aaPredicted RBP11.6□□□□□ -0.55
HLA-B-253ENST00000481849 ZNF408Q9H9D4 720 aa11.6□□□□□ -0.55
HLA-B-253ENST00000481849 SEC31BQ9NQW1 1179 aa11.6□□□□□ -0.55
HLA-B-253ENST00000481849 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
HLA-B-253ENST00000481849 CST9Q5W186 159 aa11.59□□□□□ -0.55
HLA-B-253ENST00000481849 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
HLA-B-253ENST00000481849 TSPYL6Q8N831 410 aa11.59□□□□□ -0.55
HLA-B-253ENST00000481849 ZBTB38Q8NAP3 1195 aaPredicted RBP11.59□□□□□ -0.55
HLA-B-253ENST00000481849 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
HLA-B-253ENST00000481849 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
HLA-B-253ENST00000481849 POLLQ9UGP5 575 aa11.59□□□□□ -0.55
HLA-B-253ENST00000481849 CNOT7Q9UIV1 285 aaKnown RBP11.59□□□□□ -0.55
HLA-B-253ENST00000481849 THSD7BQ9C0I4 1608 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 PSMD14O00487 310 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
HLA-B-253ENST00000481849 RPS8P62241 208 aaKnown RBP11.58□□□□□ -0.56
HLA-B-253ENST00000481849 TRIM28Q13263 835 aaKnown RBP11.58□□□□□ -0.56
HLA-B-253ENST00000481849 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 PRR14Q9BWN1 585 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 KCNQ5Q9NR82 932 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
HLA-B-253ENST00000481849 CWC25Q9NXE8 425 aaPredicted RBP11.58□□□□□ -0.56
HLA-B-253ENST00000481849 ANKRD36CQ5JPF3 1778 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 COL4A1P02462 1669 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 CEP290O15078 2479 aa11.58□□□□□ -0.56
HLA-B-253ENST00000481849 H7C1D1 291 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 ECE2O60344 883 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 CELF2O95319 508 aaKnown RBP11.57□□□□□ -0.56
HLA-B-253ENST00000481849 DDX58O95786 925 aaKnown RBP11.57□□□□□ -0.56
HLA-B-253ENST00000481849 DNAJB2P25686 324 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 LAPTM4AQ15012 233 aa11.57□□□□□ -0.56
HLA-B-253ENST00000481849 RBM26Q5T8P6 1007 aaKnown RBP11.57□□□□□ -0.56
HLA-B-253ENST00000481849 DLK2Q6UY11 383 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms