RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GYG1P46976 350 aa23.38■■□□□ 1.33
CLK1-211ENST00000481641 MMP14P50281 582 aa23.38■■□□□ 1.33
CLK1-211ENST00000481641 RABL6Q3YEC7 729 aaPredicted RBP23.38■■□□□ 1.33
CLK1-211ENST00000481641 LRRC24Q50LG9 513 aa23.38■■□□□ 1.33
CLK1-211ENST00000481641 RASAL3Q86YV0 1011 aa23.38■■□□□ 1.33
CLK1-211ENST00000481641 TRMT2AQ8IZ69 625 aaKnown RBP23.38■■□□□ 1.33
CLK1-211ENST00000481641 USP44Q9H0E7 712 aa23.38■■□□□ 1.33
CLK1-211ENST00000481641 RIPOR2Q9Y4F9 1068 aa23.38■■□□□ 1.33
CLK1-211ENST00000481641 FKBP1BP68106 108 aa23.37■■□□□ 1.33
CLK1-211ENST00000481641 UBE4AQ14139 1066 aa23.37■■□□□ 1.33
CLK1-211ENST00000481641 TTLL12Q14166 644 aaPredicted RBP23.37■■□□□ 1.33
CLK1-211ENST00000481641 DLGAP5Q15398 846 aa23.37■■□□□ 1.33
CLK1-211ENST00000481641 ABHD8Q96I13 439 aa23.37■■□□□ 1.33
CLK1-211ENST00000481641 SMC4Q9NTJ3 1288 aa23.37■■□□□ 1.33
CLK1-211ENST00000481641 PRKG1Q13976 671 aa23.36■■□□□ 1.33
CLK1-211ENST00000481641 ALDH1L2Q3SY69 923 aa23.36■■□□□ 1.33
CLK1-211ENST00000481641 KLHDC4Q8TBB5 520 aa23.36■■□□□ 1.33
CLK1-211ENST00000481641 FAM84BQ96KN1 310 aaPredicted RBP23.36■■□□□ 1.33
CLK1-211ENST00000481641 CSRNP1Q96S65 589 aa23.36■■□□□ 1.33
CLK1-211ENST00000481641 AOX1Q06278 1338 aa23.35■■□□□ 1.33
CLK1-211ENST00000481641 CFAP100Q494V2 611 aa23.35■■□□□ 1.33
CLK1-211ENST00000481641 APOBEC3FQ8IUX4 373 aaKnown RBP23.35■■□□□ 1.33
CLK1-211ENST00000481641 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
CLK1-211ENST00000481641 TRPA1O75762 1119 aa23.34■■□□□ 1.33
CLK1-211ENST00000481641 HIBADHP31937 336 aaKnown RBP23.34■■□□□ 1.33
CLK1-211ENST00000481641 TDRD7Q8NHU6 1098 aaKnown RBP23.34■■□□□ 1.33
CLK1-211ENST00000481641 RNF186Q9NXI6 227 aa23.34■■□□□ 1.33
CLK1-211ENST00000481641 FZD1Q9UP38 647 aa23.34■■□□□ 1.33
CLK1-211ENST00000481641 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.33
CLK1-211ENST00000481641 CLRN2A0PK11 232 aa23.33■■□□□ 1.33
CLK1-211ENST00000481641 NF2P35240 595 aa23.33■■□□□ 1.33
CLK1-211ENST00000481641 FKBP1AP62942 108 aaKnown RBP23.33■■□□□ 1.33
CLK1-211ENST00000481641 MTMR14Q8NCE2 650 aa23.33■■□□□ 1.33
CLK1-211ENST00000481641 PRMT6Q96LA8 375 aaPredicted RBP23.33■■□□□ 1.33
CLK1-211ENST00000481641 FAM205AQ6ZU69 1335 aa23.33■■□□□ 1.32
CLK1-211ENST00000481641 AKAP11Q9UKA4 1901 aa23.32■■□□□ 1.32
CLK1-211ENST00000481641 METTL24Q5JXM2 366 aa23.32■■□□□ 1.32
CLK1-211ENST00000481641 DEFB129Q9H1M3 183 aa23.32■■□□□ 1.32
CLK1-211ENST00000481641 IQSEC3Q9UPP2 1182 aaPredicted RBP23.32■■□□□ 1.32
CLK1-211ENST00000481641 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
CLK1-211ENST00000481641 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
CLK1-211ENST00000481641 RBM5P52756 815 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLK1-211ENST00000481641 PTPN12Q05209 780 aaKnown RBP23.31■■□□□ 1.32
CLK1-211ENST00000481641 MKRN3Q13064 507 aaKnown RBP23.31■■□□□ 1.32
CLK1-211ENST00000481641 MFSD14BQ5SR56 506 aa23.31■■□□□ 1.32
CLK1-211ENST00000481641 NOB1Q9ULX3 412 aaKnown RBP23.31■■□□□ 1.32
CLK1-211ENST00000481641 VGLL2Q8N8G2 317 aa23.3■■□□□ 1.32
CLK1-211ENST00000481641 MCOLN1Q9GZU1 580 aa23.3■■□□□ 1.32
CLK1-211ENST00000481641 VEZTQ9HBM0 779 aa23.3■■□□□ 1.32
CLK1-211ENST00000481641 SAGE1Q9NXZ1 904 aa23.3■■□□□ 1.32
CLK1-211ENST00000481641 ECM29Q5VYK3 1845 aa23.29■■□□□ 1.32
CLK1-211ENST00000481641 GRIK5Q16478 980 aa23.29■■□□□ 1.32
CLK1-211ENST00000481641 FBXO33Q7Z6M2 555 aa23.29■■□□□ 1.32
CLK1-211ENST00000481641 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.29■■□□□ 1.32
CLK1-211ENST00000481641 TTF2Q9UNY4 1162 aaKnown RBP23.29■■□□□ 1.32
CLK1-211ENST00000481641 PDE8BO95263 885 aa23.28■■□□□ 1.32
CLK1-211ENST00000481641 RFX5P48382 616 aaPredicted RBP23.28■■□□□ 1.32
CLK1-211ENST00000481641 CHAF1AQ13111 956 aaPredicted RBP23.28■■□□□ 1.32
CLK1-211ENST00000481641 ARMC9Q7Z3E5 817 aa23.28■■□□□ 1.32
CLK1-211ENST00000481641 VPS37DQ86XT2 251 aa23.28■■□□□ 1.32
CLK1-211ENST00000481641 ANGEL1Q9UNK9 670 aaKnown RBP23.28■■□□□ 1.32
CLK1-211ENST00000481641 MYO1BO43795 1136 aa23.27■■□□□ 1.32
CLK1-211ENST00000481641 DGKZQ13574 1117 aa23.27■■□□□ 1.32
CLK1-211ENST00000481641 CCDC85CA6NKD9 419 aa23.26■■□□□ 1.31
CLK1-211ENST00000481641 BCAMP50895 628 aa23.26■■□□□ 1.31
CLK1-211ENST00000481641 SSC5DA1L4H1 1573 aa23.26■■□□□ 1.31
CLK1-211ENST00000481641 COL1A1P02452 1464 aaPredicted RBP23.25■■□□□ 1.31
CLK1-211ENST00000481641 CT47B1P0C2W7 299 aaPredicted RBP23.25■■□□□ 1.31
CLK1-211ENST00000481641 LDLRAD1Q5T700 205 aa23.25■■□□□ 1.31
CLK1-211ENST00000481641 NBPF12Q5TAG4 269 aaPredicted RBP23.25■■□□□ 1.31
CLK1-211ENST00000481641 TDRD3Q9H7E2 651 aaKnown RBP23.25■■□□□ 1.31
CLK1-211ENST00000481641 EYA2O00167 538 aa23.24■■□□□ 1.31
CLK1-211ENST00000481641 FRAT2O75474 233 aaPredicted RBP23.24■■□□□ 1.31
CLK1-211ENST00000481641 UBTFL1P0CB47 393 aaPredicted RBP23.24■■□□□ 1.31
CLK1-211ENST00000481641 RARSP54136 660 aaKnown RBP23.24■■□□□ 1.31
CLK1-211ENST00000481641 CAVIN4Q5BKX8 364 aa23.24■■□□□ 1.31
CLK1-211ENST00000481641 REM2Q8IYK8 340 aaPredicted RBP23.24■■□□□ 1.31
CLK1-211ENST00000481641 ZNF70Q9UC06 446 aaPredicted RBP23.24■■□□□ 1.31
CLK1-211ENST00000481641 ARAP2Q8WZ64 1704 aa23.23■■□□□ 1.31
CLK1-211ENST00000481641 FGFR2P21802 821 aa23.23■■□□□ 1.31
CLK1-211ENST00000481641 RASA3Q14644 834 aa23.23■■□□□ 1.31
CLK1-211ENST00000481641 API5Q9BZZ5 524 aaKnown RBP23.23■■□□□ 1.31
CLK1-211ENST00000481641 SERPINA10Q9UK55 444 aa23.23■■□□□ 1.31
CLK1-211ENST00000481641 PPP2R3BQ9Y5P8 575 aa23.23■■□□□ 1.31
CLK1-211ENST00000481641 TBC1D8O95759 1140 aa23.22■■□□□ 1.31
CLK1-211ENST00000481641 CRKP46108 304 aa23.22■■□□□ 1.31
CLK1-211ENST00000481641 PUM3Q15397 648 aaKnown RBP23.22■■□□□ 1.31
CLK1-211ENST00000481641 SPDYE2Q495Y8 402 aa23.22■■□□□ 1.31
CLK1-211ENST00000481641 ATG9AQ7Z3C6 839 aa23.22■■□□□ 1.31
CLK1-211ENST00000481641 DZIP1LQ8IYY4 767 aaKnown RBP23.22■■□□□ 1.31
CLK1-211ENST00000481641 CLMNQ96JQ2 1002 aa23.22■■□□□ 1.31
CLK1-211ENST00000481641 SIL1Q9H173 461 aa23.22■■□□□ 1.31
CLK1-211ENST00000481641 TM4SF4P48230 202 aa23.21■■□□□ 1.31
CLK1-211ENST00000481641 LRRFIP2Q9Y608 721 aaKnown RBP23.21■■□□□ 1.31
CLK1-211ENST00000481641 PPP1R12BO60237 982 aaPredicted RBP23.2■■□□□ 1.3
CLK1-211ENST00000481641 IFIT1P09914 478 aaKnown RBP23.2■■□□□ 1.3
CLK1-211ENST00000481641 MAP3K11Q16584 847 aa23.2■■□□□ 1.3
CLK1-211ENST00000481641 SUPT20HL1Q3ZLR7 823 aa23.2■■□□□ 1.3
CLK1-211ENST00000481641 SPRYD7Q5W111 196 aa23.2■■□□□ 1.3
CLK1-211ENST00000481641 CDAN1Q8IWY9 1227 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms