RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CCDC192P0DO97 292 aa22.41■■□□□ 1.18
CCM2-214ENST00000481194 DSCC1Q9BVC3 393 aa22.41■■□□□ 1.18
CCM2-214ENST00000481194 TNMDQ9H2S6 317 aa22.41■■□□□ 1.18
CCM2-214ENST00000481194 LEMD3Q9Y2U8 911 aa22.41■■□□□ 1.18
CCM2-214ENST00000481194 ORC3Q9UBD5 711 aaPredicted RBP22.41■■□□□ 1.18
CCM2-214ENST00000481194 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.41■■□□□ 1.18
CCM2-214ENST00000481194 CCT2P78371 535 aaKnown RBP22.41■■□□□ 1.18
CCM2-214ENST00000481194 EAF2Q96CJ1 260 aaPredicted RBP22.41■■□□□ 1.18
CCM2-214ENST00000481194 PDE8BO95263 885 aa22.4■■□□□ 1.18
CCM2-214ENST00000481194 MCM9Q9NXL9 1143 aa22.4■■□□□ 1.18
CCM2-214ENST00000481194 INTS4Q96HW7 963 aaKnown RBP22.4■■□□□ 1.18
CCM2-214ENST00000481194 TNNI2P48788 182 aa22.4■■□□□ 1.18
CCM2-214ENST00000481194 MIGA1Q8NAN2 632 aa22.4■■□□□ 1.18
CCM2-214ENST00000481194 RTN1Q16799 776 aa22.4■■□□□ 1.18
CCM2-214ENST00000481194 MICU3Q86XE3 530 aa22.4■■□□□ 1.18
CCM2-214ENST00000481194 CHRNDQ07001 517 aa22.39■■□□□ 1.18
CCM2-214ENST00000481194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.39■■□□□ 1.18
CCM2-214ENST00000481194 F8W031 263 aaPredicted RBP22.39■■□□□ 1.18
CCM2-214ENST00000481194 SERPINB2P05120 415 aa22.39■■□□□ 1.18
CCM2-214ENST00000481194 XDHP47989 1333 aa22.39■■□□□ 1.17
CCM2-214ENST00000481194 NLRP5P59047 1200 aa22.39■■□□□ 1.17
CCM2-214ENST00000481194 RC3H1Q5TC82 1133 aaKnown RBP22.39■■□□□ 1.17
CCM2-214ENST00000481194 ZAP70P43403 619 aa22.38■■□□□ 1.17
CCM2-214ENST00000481194 BBOX1O75936 387 aa22.38■■□□□ 1.17
CCM2-214ENST00000481194 TMEM87BQ96K49 555 aa22.38■■□□□ 1.17
CCM2-214ENST00000481194 WDHD1O75717 1129 aaPredicted RBP22.38■■□□□ 1.17
CCM2-214ENST00000481194 ZNF76P36508 570 aa22.38■■□□□ 1.17
CCM2-214ENST00000481194 C2CD5Q86YS7 1000 aa22.38■■□□□ 1.17
CCM2-214ENST00000481194 GPAA1O43292 621 aa22.38■■□□□ 1.17
CCM2-214ENST00000481194 DHX8Q14562 1220 aaKnown RBP22.38■■□□□ 1.17
CCM2-214ENST00000481194 CCDC148Q8NFR7 591 aa22.38■■□□□ 1.17
CCM2-214ENST00000481194 SLC27A2O14975 620 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 TRIM28Q13263 835 aaKnown RBP22.37■■□□□ 1.17
CCM2-214ENST00000481194 STIM1Q13586 685 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 TNIP1Q15025 636 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 TEX11Q8IYF3 940 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 NUP62CLQ9H1M0 184 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 CCDC194A0A1B0GVG4 234 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 LRRC24Q50LG9 513 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 ZNF142P52746 1687 aaPredicted RBP22.37■■□□□ 1.17
CCM2-214ENST00000481194 RAB34Q9BZG1 259 aa22.37■■□□□ 1.17
CCM2-214ENST00000481194 RBM28Q9NW13 759 aaKnown RBP22.37■■□□□ 1.17
CCM2-214ENST00000481194 ERFEQ4G0M1 354 aa22.36■■□□□ 1.17
CCM2-214ENST00000481194 FEZ1Q99689 392 aa22.36■■□□□ 1.17
CCM2-214ENST00000481194 ISCA1Q9BUE6 129 aa22.36■■□□□ 1.17
CCM2-214ENST00000481194 MON2Q7Z3U7 1717 aa22.36■■□□□ 1.17
CCM2-214ENST00000481194 PICALMQ13492 652 aa22.36■■□□□ 1.17
CCM2-214ENST00000481194 CCDC102BQ68D86 513 aa22.36■■□□□ 1.17
CCM2-214ENST00000481194 KRT18P05783 430 aaKnown RBP22.36■■□□□ 1.17
CCM2-214ENST00000481194 RPS6KB1P23443 525 aa22.35■■□□□ 1.17
CCM2-214ENST00000481194 PYM1Q9BRP8 204 aaKnown RBP22.35■■□□□ 1.17
CCM2-214ENST00000481194 BMP2KQ9NSY1 1161 aaPredicted RBP22.35■■□□□ 1.17
CCM2-214ENST00000481194 BMP15O95972 392 aa22.35■■□□□ 1.17
CCM2-214ENST00000481194 CEP57L1Q8IYX8 460 aa22.35■■□□□ 1.17
CCM2-214ENST00000481194 SLC26A6Q9BXS9 759 aa22.35■■□□□ 1.17
CCM2-214ENST00000481194 XRN1Q8IZH2 1706 aaKnown RBP22.35■■□□□ 1.17
CCM2-214ENST00000481194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.35■■□□□ 1.17
CCM2-214ENST00000481194 PCMTD1Q96MG8 357 aaPredicted RBP22.35■■□□□ 1.17
CCM2-214ENST00000481194 IGKV5-2P06315 115 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 COL5A2P05997 1499 aaPredicted RBP22.34■■□□□ 1.17
CCM2-214ENST00000481194 GSPT1P15170 499 aaKnown RBP22.34■■□□□ 1.17
CCM2-214ENST00000481194 NAP1L5Q96NT1 182 aaPredicted RBP22.34■■□□□ 1.17
CCM2-214ENST00000481194 ZNF532Q9HCE3 1301 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 AK2P54819 239 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 STX8Q9UNK0 236 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 ZNF804BA4D1E1 1349 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 NRXN3Q9Y4C0 1643 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 NASPP49321 788 aaPredicted RBP22.34■■□□□ 1.17
CCM2-214ENST00000481194 PIBF1Q8WXW3 757 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 TM6SF1Q9BZW5 370 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 ADCY9O60503 1353 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 CARMIL3Q8ND23 1372 aa22.34■■□□□ 1.17
CCM2-214ENST00000481194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.33■■□□□ 1.17
CCM2-214ENST00000481194 PPEF1O14829 653 aaPredicted RBP22.33■■□□□ 1.17
CCM2-214ENST00000481194 PTPN12Q05209 780 aaKnown RBP22.33■■□□□ 1.17
CCM2-214ENST00000481194 ARMT1Q9H993 441 aa22.33■■□□□ 1.17
CCM2-214ENST00000481194 ZSCAN22P10073 491 aaPredicted RBP22.33■■□□□ 1.17
CCM2-214ENST00000481194 SUSD4Q5VX71 490 aa22.33■■□□□ 1.17
CCM2-214ENST00000481194 FERMT3Q86UX7 667 aa22.33■■□□□ 1.17
CCM2-214ENST00000481194 FAM227BQ96M60 508 aa22.33■■□□□ 1.17
CCM2-214ENST00000481194 SMC2O95347 1197 aa22.33■■□□□ 1.17
CCM2-214ENST00000481194 FAM182BQ5T319 152 aa22.33■■□□□ 1.17
CCM2-214ENST00000481194 TMED8Q6PL24 325 aaPredicted RBP22.33■■□□□ 1.17
CCM2-214ENST00000481194 TNPO1Q92973 898 aaKnown RBP22.33■■□□□ 1.17
CCM2-214ENST00000481194 LARGE2Q8N3Y3 721 aa22.33■■□□□ 1.16
CCM2-214ENST00000481194 MEGF6O75095 1541 aa22.33■■□□□ 1.16
CCM2-214ENST00000481194 HSPA4P34932 840 aa22.33■■□□□ 1.16
CCM2-214ENST00000481194 TMEM266Q2M3C6 531 aa22.33■■□□□ 1.16
CCM2-214ENST00000481194 HOOK2Q96ED9 719 aa22.33■■□□□ 1.16
CCM2-214ENST00000481194 CTAGE5O15320 804 aa22.32■■□□□ 1.16
CCM2-214ENST00000481194 IPO7O95373 1038 aaKnown RBP22.32■■□□□ 1.16
CCM2-214ENST00000481194 CCDC39Q9UFE4 941 aa22.32■■□□□ 1.16
CCM2-214ENST00000481194 UBE3CQ15386 1083 aa22.32■■□□□ 1.16
CCM2-214ENST00000481194 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
CCM2-214ENST00000481194 NIM1KQ8IY84 436 aa22.32■■□□□ 1.16
CCM2-214ENST00000481194 SNX14Q9Y5W7 946 aa22.32■■□□□ 1.16
CCM2-214ENST00000481194 EIF6P56537 245 aaKnown RBP22.32■■□□□ 1.16
CCM2-214ENST00000481194 TTLL12Q14166 644 aaPredicted RBP22.32■■□□□ 1.16
CCM2-214ENST00000481194 LMOD1P29536 600 aaPredicted RBP22.31■■□□□ 1.16
CCM2-214ENST00000481194 FILIP1LQ4L180 1135 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms