RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 BSNDQ8WZ55 320 aa7.6□□□□□ -1.19
CHCHD3-205ENST00000481152 KLHDC7BQ96G42 594 aa7.6□□□□□ -1.19
CHCHD3-205ENST00000481152 CITED4Q96RK1 184 aa7.6□□□□□ -1.19
CHCHD3-205ENST00000481152 OSGEPQ9NPF4 335 aa7.6□□□□□ -1.19
CHCHD3-205ENST00000481152 SOWAHDA6NJG2 315 aa7.59□□□□□ -1.19
CHCHD3-205ENST00000481152 DDX3YO15523 660 aaKnown RBP7.59□□□□□ -1.19
CHCHD3-205ENST00000481152 ADAM11O75078 769 aa7.59□□□□□ -1.19
CHCHD3-205ENST00000481152 BRD1O95696 1058 aa7.59□□□□□ -1.19
CHCHD3-205ENST00000481152 GNEQ9Y223 722 aaKnown RBP7.59□□□□□ -1.19
CHCHD3-205ENST00000481152 RB1CC1Q8TDY2 1594 aa7.59□□□□□ -1.19
CHCHD3-205ENST00000481152 NEFLP07196 543 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 HMGB1P09429 215 aaKnown RBP7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 GLB1P16278 677 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 DUOXA2Q1HG44 320 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 USPL1Q5W0Q7 1092 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 KIAA1211Q6ZU35 1233 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 VN1R5Q7Z5H4 357 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 GALNT12Q8IXK2 581 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 ASAP3Q8TDY4 903 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 UBASH3BQ8TF42 649 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 SLC7A3Q8WY07 619 aa7.59□□□□□ -1.2
CHCHD3-205ENST00000481152 A0A1W2PP55 124 aa7.58□□□□□ -1.2
CHCHD3-205ENST00000481152 CDK11BP21127 795 aaKnown RBP7.58□□□□□ -1.2
CHCHD3-205ENST00000481152 ORC1Q13415 861 aa7.58□□□□□ -1.2
CHCHD3-205ENST00000481152 HGSNATQ68CP4 663 aa7.58□□□□□ -1.2
CHCHD3-205ENST00000481152 CDK11AQ9UQ88 783 aaPredicted RBP7.58□□□□□ -1.2
CHCHD3-205ENST00000481152 METTL12A8MUP2 240 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 GPR182O15218 404 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 IGHA2P01877 340 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 ARL4DP49703 201 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 NLRP12P59046 1061 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 IKBKEQ14164 716 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 ZMYM1Q5SVZ6 1142 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 PRR23CQ6ZRP0 262 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
CHCHD3-205ENST00000481152 RSF1Q96T23 1441 aaPredicted RBP7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 SOX1O00570 391 aaPredicted RBP7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 CPNE3O75131 537 aaKnown RBP7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 CCNJLQ8IV13 435 aa7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 RGS22Q8NE09 1264 aa7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 UBL7Q96S82 380 aaPredicted RBP7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 RBCK1Q9BYM8 510 aa7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 CEP41Q9BYV8 373 aa7.56□□□□□ -1.2
CHCHD3-205ENST00000481152 ESRRAP11474 423 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3-205ENST00000481152 TCF12Q99081 682 aa7.55□□□□□ -1.2
CHCHD3-205ENST00000481152 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
CHCHD3-205ENST00000481152 BIN2Q9UBW5 565 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3-205ENST00000481152 HSP90B1P14625 803 aaKnown RBP7.54□□□□□ -1.2
CHCHD3-205ENST00000481152 Q8N3U1 123 aa7.54□□□□□ -1.2
CHCHD3-205ENST00000481152 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
CHCHD3-205ENST00000481152 NIF3L1Q9GZT8 377 aa7.54□□□□□ -1.2
CHCHD3-205ENST00000481152 SOX17Q9H6I2 414 aaPredicted RBP7.54□□□□□ -1.2
CHCHD3-205ENST00000481152 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
CHCHD3-205ENST00000481152 A0A096LPE4 126 aa7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 A0A1W2PPZ6 126 aa7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 EIF1AYO14602 144 aaKnown RBP7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 GRIA4P48058 902 aa7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 SPRED3Q2MJR0 410 aa7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 KIAA0319Q5VV43 1072 aa7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 ALKBH8Q96BT7 664 aaKnown RBP7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 RNF208Q9H0X6 261 aa7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 DNAJC25Q9H1X3 360 aa7.53□□□□□ -1.2
CHCHD3-205ENST00000481152 UVSSAQ2YD98 709 aa7.52□□□□□ -1.21
CHCHD3-205ENST00000481152 ARMC10Q8N2F6 343 aa7.52□□□□□ -1.21
CHCHD3-205ENST00000481152 FAM46AQ96IP4 442 aaKnown RBP7.52□□□□□ -1.21
CHCHD3-205ENST00000481152 RUSC1Q9BVN2 902 aa7.52□□□□□ -1.21
CHCHD3-205ENST00000481152 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
CHCHD3-205ENST00000481152 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
CHCHD3-205ENST00000481152 PCDH1Q08174 1060 aa7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 ANKRD34AQ69YU3 496 aa7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 TMC7Q7Z402 723 aa7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 UTP4Q969X6 686 aaKnown RBP7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 CCDC74AQ96AQ1 378 aa7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 USP26Q9BXU7 913 aa7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 EHD4Q9H223 541 aa7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 CLEC4MQ9H2X3 399 aaPredicted RBP7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 RAXQ9Y2V3 346 aa7.51□□□□□ -1.21
CHCHD3-205ENST00000481152 LOC100289279A0A1B0GTE1 492 aa7.5□□□□□ -1.21
CHCHD3-205ENST00000481152 DHX15O43143 795 aaKnown RBP7.5□□□□□ -1.21
CHCHD3-205ENST00000481152 FSTP19883 344 aa7.5□□□□□ -1.21
CHCHD3-205ENST00000481152 GSTM4Q03013 218 aa7.5□□□□□ -1.21
CHCHD3-205ENST00000481152 XP32Q5T750 250 aa7.5□□□□□ -1.21
CHCHD3-205ENST00000481152 CSRNP1Q96S65 589 aa7.5□□□□□ -1.21
CHCHD3-205ENST00000481152 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
CHCHD3-205ENST00000481152 SCO2A0A1W2PP80 73 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 MEGF11A6BM72 1044 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 PREPP48147 710 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 KCNA1Q09470 495 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 FDX2Q6P4F2 183 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 MYRFLQ96LU7 910 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 NACADO15069 1562 aa7.49□□□□□ -1.21
CHCHD3-205ENST00000481152 SART1O43290 800 aaKnown RBP7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 EIF4EBP3O60516 100 aaPredicted RBP7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 ITPKAP23677 461 aa7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 MAPK1P28482 360 aa7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 TMPRSS13Q9BYE2 586 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms