RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 SBNO1A3KN83 1393 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 FRMPD1Q5SYB0 1578 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 HSF2BPO75031 334 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 SP100P23497 879 aaPredicted RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 CCT4P50991 539 aaKnown RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 MYSM1Q5VVJ2 828 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 SEPT8Q92599 483 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 C9orf78Q9NZ63 289 aaPredicted RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 CTDP1Q9Y5B0 961 aaPredicted RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 SETD1BQ9UPS6 1966 aaKnown RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 VCAM1P19320 739 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 NUTM2GQ5VZR2 741 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 LUC7LQ9NQ29 371 aaKnown RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 SEPT10Q9P0V9 454 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 SLAIN2Q9P270 581 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 ABCF2Q9UG63 623 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 ZNF330Q9Y3S2 320 aaPredicted RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 DISP3Q9P2K9 1392 aa5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 CLTCQ00610 1675 aaKnown RBP5.16□□□□□ -1.58
GPCPD1-205ENST00000481038 K7ELQ4 463 aaPredicted RBP5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 HIP1RO75146 1068 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 HNRNPCP07910 306 aaKnown RBP eCLIP5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 ZFYVE27Q5T4F4 411 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 NAIF1Q69YI7 327 aaPredicted RBP5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 IPO5O00410 1097 aaKnown RBP5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 TUBB4AP04350 444 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 GJA8P48165 433 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 HSPA2P54652 639 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 TERF2Q15554 542 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 DZIP1LQ8IYY4 767 aaKnown RBP5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 RASEFQ8IZ41 740 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 TMTC2Q8N394 836 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 SYTL4Q96C24 671 aaPredicted RBP5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 TESK2Q96S53 571 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 YIPF3Q9GZM5 350 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 TMOD3Q9NYL9 352 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 DEPDC5O75140 1603 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 PTPRMP28827 1452 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 SNUPNO95149 360 aaKnown RBP5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 PCYT1AP49585 367 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 DMPKQ09013 629 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 PDE3AQ14432 1141 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 ISM2Q6H9L7 571 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 ATP6V0A1Q93050 837 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 TNMDQ9H2S6 317 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 TSC22D4Q9Y3Q8 395 aa5.15□□□□□ -1.58
GPCPD1-205ENST00000481038 ADGRL3Q9HAR2 1447 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 HMOX1P09601 288 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 XBP1P17861 261 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 PAX3P23760 479 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 COPB2P35606 906 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 CCDC57Q2TAC2 916 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 ZSCAN23Q3MJ62 389 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 RASIP1Q5U651 963 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 NME9Q86XW9 330 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 CCDC63Q8NA47 563 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 IP6K1Q92551 441 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 LRRIQ1Q96JM4 1722 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 TROVE2P10155 538 aaKnown RBP eCLIP5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 COG7P83436 770 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 IFFO1Q0D2I5 559 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 KIF5AQ12840 1032 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 KLHL40Q2TBA0 621 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 ALDH1L2Q3SY69 923 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 RPGRQ92834 1020 aaKnown RBP5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 MPHOSPH6Q99547 160 aaKnown RBP5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 UNC45AQ9H3U1 944 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 HELLSQ9NRZ9 838 aa5.15□□□□□ -1.59
GPCPD1-205ENST00000481038 TMEM94Q12767 1356 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 A6NNZ2 444 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 GCFC2P16383 781 aaKnown RBP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 SFPQP23246 707 aaKnown RBP eCLIP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 LTKP29376 864 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 SLC20A2Q08357 652 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 TAF7Q15545 349 aaPredicted RBP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 TUBB8Q3ZCM7 444 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 LRSAM1Q6UWE0 723 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 RIC3Q7Z5B4 369 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 CTAGE6Q86UF2 777 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 CCDC144CPQ8IYA2 1237 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 SPDL1Q96EA4 605 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 BAIAP2L1Q9UHR4 511 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 ADAMTS8Q9UP79 889 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 DAAM1Q9Y4D1 1078 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 ZC3H6P61129 1189 aaKnown RBP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 FKBP5Q13451 457 aaPredicted RBP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 LONRF3Q496Y0 759 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 TNPO1Q92973 898 aaKnown RBP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 SH3BP1Q9Y3L3 701 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 KIAA1210Q9ULL0 1709 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 CLTCL1P53675 1640 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 PSMC1P62191 440 aaKnown RBP5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 CCDC96Q2M329 555 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 AMOTL1Q8IY63 956 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 VWDEQ8N2E2 1590 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 AATKQ6ZMQ8 1374 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 PARD3Q8TEW0 1356 aa5.14□□□□□ -1.59
GPCPD1-205ENST00000481038 CEP152O94986 1710 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms